RNA–Protein interactions for RNA: ENSMUST00000085109.9

Ttc8-202, Transcript of Tetratricopeptide repeat protein 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ttc8, Length 2,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc8-202ENSMUST00000085109 NischQ80TM9 1593 aa26.52■■□□□ 1.84
Ttc8-202ENSMUST00000085109 Gm35339A0A140LHH9 1649 aa26.18■■□□□ 1.78
Ttc8-202ENSMUST00000085109 Abcc9P70170 1546 aa25.79■■□□□ 1.72
Ttc8-202ENSMUST00000085109 Abcc8B2RUS7 1588 aa25.2■■□□□ 1.62
Ttc8-202ENSMUST00000085109 Rtl1Q7M732 1744 aa24.41■■□□□ 1.5
Ttc8-202ENSMUST00000085109 Rhox8Q6VSS7 320 aa24.4■■□□□ 1.5
Ttc8-202ENSMUST00000085109 Ccdc180J3QNE4 1664 aa23.89■■□□□ 1.41
Ttc8-202ENSMUST00000085109 Dcaf1Q80TR8 1506 aa23.64■■□□□ 1.37
Ttc8-202ENSMUST00000085109 ScribQ80U72 1612 aa23.45■■□□□ 1.34
Ttc8-202ENSMUST00000085109 Zcchc6Q5BLK4 1491 aaKnown RBP23.39■■□□□ 1.34
Ttc8-202ENSMUST00000085109 Rb1cc1Q9ESK9 1588 aa23.23■■□□□ 1.31
Ttc8-202ENSMUST00000085109 Kdm5dQ62240 1548 aa23.02■■□□□ 1.28
Ttc8-202ENSMUST00000085109 Baz1aO88379 1555 aa23■■□□□ 1.27
Ttc8-202ENSMUST00000085109 NacadQ5SWP3 1504 aa22.88■■□□□ 1.25
Ttc8-202ENSMUST00000085109 HrcG5E8J6 738 aa22.74■■□□□ 1.23
Ttc8-202ENSMUST00000085109 Crybg2B7ZCC2 1516 aa22.68■■□□□ 1.22
Ttc8-202ENSMUST00000085109 Ccdc136Q3TVA9 1136 aa22.6■■□□□ 1.21
Ttc8-202ENSMUST00000085109 Rpgrip1Q9EPQ2 1331 aa22.55■■□□□ 1.2
Ttc8-202ENSMUST00000085109 Smarca2Q6DIC0 1577 aa22.49■■□□□ 1.19
Ttc8-202ENSMUST00000085109 Sycp2Q9CUU3 1500 aa22.37■■□□□ 1.17
Ttc8-202ENSMUST00000085109 Trim41Q5NCC3 630 aa22.31■■□□□ 1.16
Ttc8-202ENSMUST00000085109 Acin1Q9JIX8 1338 aaKnown RBP22.13■■□□□ 1.13
Ttc8-202ENSMUST00000085109 Cep164Q5DU05 1446 aa22.04■■□□□ 1.12
Ttc8-202ENSMUST00000085109 Brd4Q9ESU6 1400 aaKnown RBP21.95■■□□□ 1.1
Ttc8-202ENSMUST00000085109 BicraF8VPZ9 1578 aa21.84■■□□□ 1.09
Ttc8-202ENSMUST00000085109 Cecr2E9Q2Z1 1453 aa21.82■■□□□ 1.08
Ttc8-202ENSMUST00000085109 Ehmt2Q9Z148 1263 aaKnown RBP21.8■■□□□ 1.08
Ttc8-202ENSMUST00000085109 Golga3P55937 1487 aa21.7■■□□□ 1.06
Ttc8-202ENSMUST00000085109 Synj1Q8CHC4 1574 aa21.7■■□□□ 1.06
Ttc8-202ENSMUST00000085109 Rsf1E9PWW9 1441 aaKnown RBP21.68■■□□□ 1.06
Ttc8-202ENSMUST00000085109 Cngb1E1AZ71 1325 aa21.63■■□□□ 1.05
Ttc8-202ENSMUST00000085109 CftrP26361 1476 aa21.59■■□□□ 1.05
Ttc8-202ENSMUST00000085109 Chic1Q8CBW7 227 aa21.57■■□□□ 1.04
Ttc8-202ENSMUST00000085109 Ccdc88bQ4QRL3 1481 aa21.52■■□□□ 1.04
Ttc8-202ENSMUST00000085109 Cttnbp2B9EJA2 1648 aa21.52■■□□□ 1.04
Ttc8-202ENSMUST00000085109 Top2bQ64511 1612 aa21.49■■□□□ 1.03
Ttc8-202ENSMUST00000085109 Smarca4Q3TKT4 1613 aaKnown RBP21.41■■□□□ 1.02
Ttc8-202ENSMUST00000085109 Esf1Q3V1V3 845 aaKnown RBP21.35■■□□□ 1.01
Ttc8-202ENSMUST00000085109 Gab3Q8BSM5 595 aa21.32■■□□□ 1
Ttc8-202ENSMUST00000085109 Cc2d2aQ8CFW7 1633 aa21.2■□□□□ 0.98
Ttc8-202ENSMUST00000085109 Fmn1Q05860 1466 aa21.15■□□□□ 0.98
Ttc8-202ENSMUST00000085109 Pcgf6Q99NA9 353 aa21.11■□□□□ 0.97
Ttc8-202ENSMUST00000085109 Iqgap2Q3UQ44 1575 aa21.1■□□□□ 0.97
Ttc8-202ENSMUST00000085109 Top2aQ01320 1528 aaKnown RBP21.06■□□□□ 0.96
Ttc8-202ENSMUST00000085109 Rapgef2Q8CHG7 1496 aa21.05■□□□□ 0.96
Ttc8-202ENSMUST00000085109 Atad2bE9Q166 1460 aaKnown RBP21.01■□□□□ 0.95
Ttc8-202ENSMUST00000085109 NefmP08553 848 aa20.94■□□□□ 0.94
Ttc8-202ENSMUST00000085109 Pds5bQ4VA53 1446 aaKnown RBP20.9■□□□□ 0.94
Ttc8-202ENSMUST00000085109 Mier1Q5UAK0 511 aa20.87■□□□□ 0.93
Ttc8-202ENSMUST00000085109 Cep162Q6ZQ06 1403 aa20.85■□□□□ 0.93
Ttc8-202ENSMUST00000085109 TnnQ80Z71 1560 aa20.81■□□□□ 0.92
Ttc8-202ENSMUST00000085109 Supt5hO55201 1082 aaKnown RBP20.76■□□□□ 0.91
Ttc8-202ENSMUST00000085109 Eif4g1Q6NZJ6 1600 aaKnown RBP20.73■□□□□ 0.91
Ttc8-202ENSMUST00000085109 Wdr62Q3U3T8 1523 aa20.68■□□□□ 0.9
Ttc8-202ENSMUST00000085109 Frmpd1A2AKB4 1549 aa20.66■□□□□ 0.9
Ttc8-202ENSMUST00000085109 Lamc3Q9R0B6 1581 aa20.62■□□□□ 0.89
Ttc8-202ENSMUST00000085109 Npm2Q80W85 207 aa20.61■□□□□ 0.89
Ttc8-202ENSMUST00000085109 Myt1lP97500 1187 aa20.58■□□□□ 0.88
Ttc8-202ENSMUST00000085109 UbtfP25976 765 aaKnown RBP20.57■□□□□ 0.88
Ttc8-202ENSMUST00000085109 Zeb1Q64318 1117 aa20.57■□□□□ 0.88
Ttc8-202ENSMUST00000085109 NrkQ9R0G8 1455 aa20.52■□□□□ 0.88
Ttc8-202ENSMUST00000085109 Clip1Q922J3 1391 aa20.51■□□□□ 0.87
Ttc8-202ENSMUST00000085109 Ercc6F8VPZ5 1481 aa20.5■□□□□ 0.87
Ttc8-202ENSMUST00000085109 Arhgap35Q91YM2 1499 aa20.49■□□□□ 0.87
Ttc8-202ENSMUST00000085109 Unc13aQ4KUS2 1712 aa20.46■□□□□ 0.87
Ttc8-202ENSMUST00000085109 PtprkP35822 1457 aa20.42■□□□□ 0.86
Ttc8-202ENSMUST00000085109 Kif15Q6P9L6 1387 aa20.42■□□□□ 0.86
Ttc8-202ENSMUST00000085109 Camsap1A2AHC3 1581 aa20.42■□□□□ 0.86
Ttc8-202ENSMUST00000085109 Shroom4Q1W617 1475 aa20.4■□□□□ 0.86
Ttc8-202ENSMUST00000085109 Map3k1P53349 1493 aa20.39■□□□□ 0.85
Ttc8-202ENSMUST00000085109 Eea1Q8BL66 1411 aa20.35■□□□□ 0.85
Ttc8-202ENSMUST00000085109 Las1lA2BE28 776 aaKnown RBP20.32■□□□□ 0.84
Ttc8-202ENSMUST00000085109 Sall2Q9QX96 1004 aa20.32■□□□□ 0.84
Ttc8-202ENSMUST00000085109 Ccdc18Q640L5 1455 aa20.31■□□□□ 0.84
Ttc8-202ENSMUST00000085109 Ncapd3Q6ZQK0 1506 aa20.31■□□□□ 0.84
Ttc8-202ENSMUST00000085109 Grin2bQ01097 1482 aa20.28■□□□□ 0.84
Ttc8-202ENSMUST00000085109 Arap1Q4LDD4 1452 aa20.28■□□□□ 0.84
Ttc8-202ENSMUST00000085109 Plekhg3Q4VAC9 1341 aa20.28■□□□□ 0.84
Ttc8-202ENSMUST00000085109 Arhgef5E9Q7D5 1581 aa20.26■□□□□ 0.83
Ttc8-202ENSMUST00000085109 Il27Q8K3I6 234 aa20.25■□□□□ 0.83
Ttc8-202ENSMUST00000085109 Mroh2bQ7M6Y6 1581 aa20.22■□□□□ 0.83
Ttc8-202ENSMUST00000085109 Setd5Q5XJV7 1441 aa20.21■□□□□ 0.83
Ttc8-202ENSMUST00000085109 Phldb1Q6PDH0 1371 aaKnown RBP20.2■□□□□ 0.82
Ttc8-202ENSMUST00000085109 AqrQ8CFQ3 1481 aaKnown RBP20.17■□□□□ 0.82
Ttc8-202ENSMUST00000085109 Thoc2B1AZI6 1594 aaKnown RBP20.17■□□□□ 0.82
Ttc8-202ENSMUST00000085109 Erich3F6QRE9 1637 aa20.17■□□□□ 0.82
Ttc8-202ENSMUST00000085109 Neurod1Q60867 357 aa20.16■□□□□ 0.82
Ttc8-202ENSMUST00000085109 TonslQ6NZL6 1363 aa20.14■□□□□ 0.81
Ttc8-202ENSMUST00000085109 Tiam1Q60610 1591 aa20.13■□□□□ 0.81
Ttc8-202ENSMUST00000085109 ClspnQ80YR7 1315 aa20.1■□□□□ 0.81
Ttc8-202ENSMUST00000085109 Baz1bQ9Z277 1479 aa20.1■□□□□ 0.81
Ttc8-202ENSMUST00000085109 Aebp2Q9Z248 504 aaKnown RBP20.1■□□□□ 0.81
Ttc8-202ENSMUST00000085109 Ankrd26Q811D2 1581 aa20.08■□□□□ 0.81
Ttc8-202ENSMUST00000085109 Efcab5A0JP43 1406 aa20.08■□□□□ 0.8
Ttc8-202ENSMUST00000085109 Cux2P70298 1426 aa20.08■□□□□ 0.8
Ttc8-202ENSMUST00000085109 Wdr66E9Q743 1299 aa20.07■□□□□ 0.8
Ttc8-202ENSMUST00000085109 Kdm5bQ80Y84 1544 aa20.05■□□□□ 0.8
Ttc8-202ENSMUST00000085109 TchhA0A0B4J1F9 1599 aa20.04■□□□□ 0.8
Ttc8-202ENSMUST00000085109 Naip1Q9QWK5 1403 aa20.03■□□□□ 0.8
Ttc8-202ENSMUST00000085109 Fam135aQ6NS59 1506 aa20■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms