RNA–Protein interactions for RNA: ENSMUST00000079205.13

Chpf-201, Transcript of Chondroitin sulfate synthase 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chpf, Length 2,892 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chpf-201ENSMUST00000079205 NischQ80TM9 1593 aa28.96■■■□□ 2.23
Chpf-201ENSMUST00000079205 Gm35339A0A140LHH9 1649 aa28.17■■■□□ 2.1
Chpf-201ENSMUST00000079205 Abcc9P70170 1546 aa28.14■■■□□ 2.1
Chpf-201ENSMUST00000079205 Abcc8B2RUS7 1588 aa27.39■■□□□ 1.98
Chpf-201ENSMUST00000079205 Rhox8Q6VSS7 320 aa27.38■■□□□ 1.97
Chpf-201ENSMUST00000079205 Rtl1Q7M732 1744 aa27.14■■□□□ 1.94
Chpf-201ENSMUST00000079205 Ccdc180J3QNE4 1664 aa26.81■■□□□ 1.88
Chpf-201ENSMUST00000079205 Rpgrip1Q9EPQ2 1331 aa26.69■■□□□ 1.86
Chpf-201ENSMUST00000079205 Zcchc6Q5BLK4 1491 aaKnown RBP26.24■■□□□ 1.79
Chpf-201ENSMUST00000079205 Acin1Q9JIX8 1338 aaKnown RBP26.03■■□□□ 1.76
Chpf-201ENSMUST00000079205 Ehmt2Q9Z148 1263 aaKnown RBP25.94■■□□□ 1.74
Chpf-201ENSMUST00000079205 Pcgf6Q99NA9 353 aa25.73■■□□□ 1.71
Chpf-201ENSMUST00000079205 Dcaf1Q80TR8 1506 aa25.54■■□□□ 1.68
Chpf-201ENSMUST00000079205 HrcG5E8J6 738 aa25.53■■□□□ 1.68
Chpf-201ENSMUST00000079205 Rb1cc1Q9ESK9 1588 aa25.41■■□□□ 1.66
Chpf-201ENSMUST00000079205 Ccdc136Q3TVA9 1136 aa25.38■■□□□ 1.65
Chpf-201ENSMUST00000079205 ScribQ80U72 1612 aa25.34■■□□□ 1.65
Chpf-201ENSMUST00000079205 Baz1aO88379 1555 aa25.11■■□□□ 1.61
Chpf-201ENSMUST00000079205 Supt5hO55201 1082 aaKnown RBP25.07■■□□□ 1.6
Chpf-201ENSMUST00000079205 Trim41Q5NCC3 630 aa24.97■■□□□ 1.59
Chpf-201ENSMUST00000079205 Kdm5dQ62240 1548 aa24.96■■□□□ 1.59
Chpf-201ENSMUST00000079205 Neurod1Q60867 357 aa24.88■■□□□ 1.57
Chpf-201ENSMUST00000079205 Cep164Q5DU05 1446 aa24.67■■□□□ 1.54
Chpf-201ENSMUST00000079205 NacadQ5SWP3 1504 aa24.64■■□□□ 1.54
Chpf-201ENSMUST00000079205 Smarca2Q6DIC0 1577 aa24.6■■□□□ 1.53
Chpf-201ENSMUST00000079205 Crybg2B7ZCC2 1516 aa24.48■■□□□ 1.51
Chpf-201ENSMUST00000079205 Zeb1Q64318 1117 aa24.45■■□□□ 1.5
Chpf-201ENSMUST00000079205 Las1lA2BE28 776 aaKnown RBP24.44■■□□□ 1.5
Chpf-201ENSMUST00000079205 Rsf1E9PWW9 1441 aaKnown RBP24.27■■□□□ 1.48
Chpf-201ENSMUST00000079205 Chic1Q8CBW7 227 aa24.27■■□□□ 1.48
Chpf-201ENSMUST00000079205 1700123L14RikQ3V2K7 440 aa24.24■■□□□ 1.47
Chpf-201ENSMUST00000079205 Cngb1E1AZ71 1325 aa24.21■■□□□ 1.47
Chpf-201ENSMUST00000079205 Gab3Q8BSM5 595 aa24.18■■□□□ 1.46
Chpf-201ENSMUST00000079205 Csrnp3P59055 597 aa24.13■■□□□ 1.45
Chpf-201ENSMUST00000079205 Sycp2Q9CUU3 1500 aa24.11■■□□□ 1.45
Chpf-201ENSMUST00000079205 Sall2Q9QX96 1004 aa24.09■■□□□ 1.45
Chpf-201ENSMUST00000079205 Ccdc88bQ4QRL3 1481 aa24.05■■□□□ 1.44
Chpf-201ENSMUST00000079205 Brd4Q9ESU6 1400 aaKnown RBP24.03■■□□□ 1.44
Chpf-201ENSMUST00000079205 Cecr2E9Q2Z1 1453 aa23.97■■□□□ 1.43
Chpf-201ENSMUST00000079205 Golga3P55937 1487 aa23.95■■□□□ 1.42
Chpf-201ENSMUST00000079205 Anks4bQ8K3X6 423 aa23.94■■□□□ 1.42
Chpf-201ENSMUST00000079205 Mier1Q5UAK0 511 aa23.93■■□□□ 1.42
Chpf-201ENSMUST00000079205 NefmP08553 848 aa23.92■■□□□ 1.42
Chpf-201ENSMUST00000079205 CenpbP27790 599 aa23.84■■□□□ 1.41
Chpf-201ENSMUST00000079205 Synj1Q8CHC4 1574 aa23.83■■□□□ 1.41
Chpf-201ENSMUST00000079205 Wdr66E9Q743 1299 aa23.66■■□□□ 1.38
Chpf-201ENSMUST00000079205 Gm38655A0A286YDK6 273 aa23.66■■□□□ 1.38
Chpf-201ENSMUST00000079205 CftrP26361 1476 aa23.63■■□□□ 1.37
Chpf-201ENSMUST00000079205 Esf1Q3V1V3 845 aaKnown RBP23.6■■□□□ 1.37
Chpf-201ENSMUST00000079205 Myt1Q8CFC2 1127 aa23.6■■□□□ 1.37
Chpf-201ENSMUST00000079205 Top2bQ64511 1612 aa23.59■■□□□ 1.37
Chpf-201ENSMUST00000079205 BicraF8VPZ9 1578 aa23.57■■□□□ 1.36
Chpf-201ENSMUST00000079205 Aplp2Q06335 707 aa23.56■■□□□ 1.36
Chpf-201ENSMUST00000079205 Ppargc1bQ8VHJ7 1014 aa23.55■■□□□ 1.36
Chpf-201ENSMUST00000079205 Cdk11bP24788 784 aaKnown RBP23.53■■□□□ 1.36
Chpf-201ENSMUST00000079205 Aebp2Q9Z248 504 aaKnown RBP23.5■■□□□ 1.35
Chpf-201ENSMUST00000079205 Nop58Q6DFW4 536 aaKnown RBP23.48■■□□□ 1.35
Chpf-201ENSMUST00000079205 UbtfP25976 765 aaKnown RBP23.45■■□□□ 1.34
Chpf-201ENSMUST00000079205 Cttnbp2B9EJA2 1648 aa23.4■■□□□ 1.34
Chpf-201ENSMUST00000079205 Cc2d2aQ8CFW7 1633 aa23.4■■□□□ 1.34
Chpf-201ENSMUST00000079205 Rapgef2Q8CHG7 1496 aa23.38■■□□□ 1.33
Chpf-201ENSMUST00000079205 DiexfQ8BTT6 772 aaKnown RBP23.33■■□□□ 1.32
Chpf-201ENSMUST00000079205 ClspnQ80YR7 1315 aa23.23■■□□□ 1.31
Chpf-201ENSMUST00000079205 Top2aQ01320 1528 aaKnown RBP23.21■■□□□ 1.31
Chpf-201ENSMUST00000079205 Fmn1Q05860 1466 aa23.2■■□□□ 1.31
Chpf-201ENSMUST00000079205 Cep162Q6ZQ06 1403 aa23.2■■□□□ 1.3
Chpf-201ENSMUST00000079205 Myt1lP97500 1187 aa23.17■■□□□ 1.3
Chpf-201ENSMUST00000079205 Smarca4Q3TKT4 1613 aaKnown RBP23.16■■□□□ 1.3
Chpf-201ENSMUST00000079205 Bcl11aQ9QYE3 773 aa23.11■■□□□ 1.29
Chpf-201ENSMUST00000079205 Fam71e1A1L3C1 212 aa23.02■■□□□ 1.28
Chpf-201ENSMUST00000079205 Mapk8ip2Q9ERE9 830 aa23■■□□□ 1.27
Chpf-201ENSMUST00000079205 TonslQ6NZL6 1363 aa23■■□□□ 1.27
Chpf-201ENSMUST00000079205 Npm2Q80W85 207 aa22.96■■□□□ 1.27
Chpf-201ENSMUST00000079205 Plekhg3Q4VAC9 1341 aa22.95■■□□□ 1.26
Chpf-201ENSMUST00000079205 Clip1Q922J3 1391 aa22.94■■□□□ 1.26
Chpf-201ENSMUST00000079205 SafbD3YXK2 937 aaKnown RBP22.94■■□□□ 1.26
Chpf-201ENSMUST00000079205 Eif4g1Q6NZJ6 1600 aaKnown RBP22.91■■□□□ 1.26
Chpf-201ENSMUST00000079205 Ncapd3Q6ZQK0 1506 aa22.87■■□□□ 1.25
Chpf-201ENSMUST00000079205 Hnrnpul2Q00PI9 745 aaKnown RBP22.86■■□□□ 1.25
Chpf-201ENSMUST00000079205 Iqgap2Q3UQ44 1575 aa22.82■■□□□ 1.24
Chpf-201ENSMUST00000079205 Ap3b1Q9Z1T1 1105 aa22.7■■□□□ 1.22
Chpf-201ENSMUST00000079205 Arhgap35Q91YM2 1499 aa22.69■■□□□ 1.22
Chpf-201ENSMUST00000079205 Ifnlr1Q8CGK5 535 aa22.66■■□□□ 1.22
Chpf-201ENSMUST00000079205 TnnQ80Z71 1560 aa22.66■■□□□ 1.22
Chpf-201ENSMUST00000079205 Arap1Q4LDD4 1452 aa22.64■■□□□ 1.21
Chpf-201ENSMUST00000079205 PtprkP35822 1457 aa22.62■■□□□ 1.21
Chpf-201ENSMUST00000079205 PrkcshO08795 521 aa22.61■■□□□ 1.21
Chpf-201ENSMUST00000079205 Kdm5bQ80Y84 1544 aa22.59■■□□□ 1.21
Chpf-201ENSMUST00000079205 Eid3Q3V124 375 aa22.59■■□□□ 1.21
Chpf-201ENSMUST00000079205 Eea1Q8BL66 1411 aa22.59■■□□□ 1.21
Chpf-201ENSMUST00000079205 Tnnt3Q9QZ47 272 aa22.58■■□□□ 1.21
Chpf-201ENSMUST00000079205 Il27Q8K3I6 234 aa22.57■■□□□ 1.2
Chpf-201ENSMUST00000079205 Atad2bE9Q166 1460 aaKnown RBP22.56■■□□□ 1.2
Chpf-201ENSMUST00000079205 NrkQ9R0G8 1455 aa22.55■■□□□ 1.2
Chpf-201ENSMUST00000079205 Arhgef5E9Q7D5 1581 aa22.52■■□□□ 1.2
Chpf-201ENSMUST00000079205 Setd5Q5XJV7 1441 aa22.48■■□□□ 1.19
Chpf-201ENSMUST00000079205 Ccdc18Q640L5 1455 aa22.46■■□□□ 1.19
Chpf-201ENSMUST00000079205 Anp32aO35381 247 aa22.4■■□□□ 1.18
Chpf-201ENSMUST00000079205 Shroom4Q1W617 1475 aa22.38■■□□□ 1.17
Chpf-201ENSMUST00000079205 Tiam1Q60610 1591 aa22.36■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 140 ms