RNA–Protein interactions for RNA: ENSMUST00000079205.13

Chpf-201, Transcript of Chondroitin sulfate synthase 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chpf, Length 2,892 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chpf-201ENSMUST00000079205 NischQ80TM9 1593 aa28.96■■■□□ 2.23
Chpf-201ENSMUST00000079205 Gm35339A0A140LHH9 1649 aa28.17■■■□□ 2.1
Chpf-201ENSMUST00000079205 Abcc9P70170 1546 aa28.14■■■□□ 2.1
Chpf-201ENSMUST00000079205 Abcc8B2RUS7 1588 aa27.39■■□□□ 1.98
Chpf-201ENSMUST00000079205 Rhox8Q6VSS7 320 aa27.38■■□□□ 1.97
Chpf-201ENSMUST00000079205 Rtl1Q7M732 1744 aa27.14■■□□□ 1.94
Chpf-201ENSMUST00000079205 Ccdc180J3QNE4 1664 aa26.81■■□□□ 1.88
Chpf-201ENSMUST00000079205 Rpgrip1Q9EPQ2 1331 aa26.69■■□□□ 1.86
Chpf-201ENSMUST00000079205 Zcchc6Q5BLK4 1491 aaKnown RBP26.24■■□□□ 1.79
Chpf-201ENSMUST00000079205 Acin1Q9JIX8 1338 aaKnown RBP26.03■■□□□ 1.76
Chpf-201ENSMUST00000079205 Ehmt2Q9Z148 1263 aaKnown RBP25.94■■□□□ 1.74
Chpf-201ENSMUST00000079205 Pcgf6Q99NA9 353 aa25.73■■□□□ 1.71
Chpf-201ENSMUST00000079205 Dcaf1Q80TR8 1506 aa25.54■■□□□ 1.68
Chpf-201ENSMUST00000079205 HrcG5E8J6 738 aa25.53■■□□□ 1.68
Chpf-201ENSMUST00000079205 Rb1cc1Q9ESK9 1588 aa25.41■■□□□ 1.66
Chpf-201ENSMUST00000079205 Ccdc136Q3TVA9 1136 aa25.38■■□□□ 1.65
Chpf-201ENSMUST00000079205 ScribQ80U72 1612 aa25.34■■□□□ 1.65
Chpf-201ENSMUST00000079205 Baz1aO88379 1555 aa25.11■■□□□ 1.61
Chpf-201ENSMUST00000079205 Supt5hO55201 1082 aaKnown RBP25.07■■□□□ 1.6
Chpf-201ENSMUST00000079205 Trim41Q5NCC3 630 aa24.97■■□□□ 1.59
Chpf-201ENSMUST00000079205 Kdm5dQ62240 1548 aa24.96■■□□□ 1.59
Chpf-201ENSMUST00000079205 Neurod1Q60867 357 aa24.88■■□□□ 1.57
Chpf-201ENSMUST00000079205 Cep164Q5DU05 1446 aa24.67■■□□□ 1.54
Chpf-201ENSMUST00000079205 NacadQ5SWP3 1504 aa24.64■■□□□ 1.54
Chpf-201ENSMUST00000079205 Smarca2Q6DIC0 1577 aa24.6■■□□□ 1.53
Chpf-201ENSMUST00000079205 Crybg2B7ZCC2 1516 aa24.48■■□□□ 1.51
Chpf-201ENSMUST00000079205 Zeb1Q64318 1117 aa24.45■■□□□ 1.5
Chpf-201ENSMUST00000079205 Las1lA2BE28 776 aaKnown RBP24.44■■□□□ 1.5
Chpf-201ENSMUST00000079205 Rsf1E9PWW9 1441 aaKnown RBP24.27■■□□□ 1.48
Chpf-201ENSMUST00000079205 Chic1Q8CBW7 227 aa24.27■■□□□ 1.48
Chpf-201ENSMUST00000079205 1700123L14RikQ3V2K7 440 aa24.24■■□□□ 1.47
Chpf-201ENSMUST00000079205 Cngb1E1AZ71 1325 aa24.21■■□□□ 1.47
Chpf-201ENSMUST00000079205 Gab3Q8BSM5 595 aa24.18■■□□□ 1.46
Chpf-201ENSMUST00000079205 Csrnp3P59055 597 aa24.13■■□□□ 1.45
Chpf-201ENSMUST00000079205 Sycp2Q9CUU3 1500 aa24.11■■□□□ 1.45
Chpf-201ENSMUST00000079205 Sall2Q9QX96 1004 aa24.09■■□□□ 1.45
Chpf-201ENSMUST00000079205 Ccdc88bQ4QRL3 1481 aa24.05■■□□□ 1.44
Chpf-201ENSMUST00000079205 Brd4Q9ESU6 1400 aaKnown RBP24.03■■□□□ 1.44
Chpf-201ENSMUST00000079205 Cecr2E9Q2Z1 1453 aa23.97■■□□□ 1.43
Chpf-201ENSMUST00000079205 Golga3P55937 1487 aa23.95■■□□□ 1.42
Chpf-201ENSMUST00000079205 Anks4bQ8K3X6 423 aa23.94■■□□□ 1.42
Chpf-201ENSMUST00000079205 Mier1Q5UAK0 511 aa23.93■■□□□ 1.42
Chpf-201ENSMUST00000079205 NefmP08553 848 aa23.92■■□□□ 1.42
Chpf-201ENSMUST00000079205 CenpbP27790 599 aa23.84■■□□□ 1.41
Chpf-201ENSMUST00000079205 Synj1Q8CHC4 1574 aa23.83■■□□□ 1.41
Chpf-201ENSMUST00000079205 Wdr66E9Q743 1299 aa23.66■■□□□ 1.38
Chpf-201ENSMUST00000079205 Gm38655A0A286YDK6 273 aa23.66■■□□□ 1.38
Chpf-201ENSMUST00000079205 CftrP26361 1476 aa23.63■■□□□ 1.37
Chpf-201ENSMUST00000079205 Esf1Q3V1V3 845 aaKnown RBP23.6■■□□□ 1.37
Chpf-201ENSMUST00000079205 Myt1Q8CFC2 1127 aa23.6■■□□□ 1.37
Chpf-201ENSMUST00000079205 Top2bQ64511 1612 aa23.59■■□□□ 1.37
Chpf-201ENSMUST00000079205 BicraF8VPZ9 1578 aa23.57■■□□□ 1.36
Chpf-201ENSMUST00000079205 Aplp2Q06335 707 aa23.56■■□□□ 1.36
Chpf-201ENSMUST00000079205 Ppargc1bQ8VHJ7 1014 aa23.55■■□□□ 1.36
Chpf-201ENSMUST00000079205 Cdk11bP24788 784 aaKnown RBP23.53■■□□□ 1.36
Chpf-201ENSMUST00000079205 Aebp2Q9Z248 504 aaKnown RBP23.5■■□□□ 1.35
Chpf-201ENSMUST00000079205 Nop58Q6DFW4 536 aaKnown RBP23.48■■□□□ 1.35
Chpf-201ENSMUST00000079205 UbtfP25976 765 aaKnown RBP23.45■■□□□ 1.34
Chpf-201ENSMUST00000079205 Cttnbp2B9EJA2 1648 aa23.4■■□□□ 1.34
Chpf-201ENSMUST00000079205 Cc2d2aQ8CFW7 1633 aa23.4■■□□□ 1.34
Chpf-201ENSMUST00000079205 Rapgef2Q8CHG7 1496 aa23.38■■□□□ 1.33
Chpf-201ENSMUST00000079205 DiexfQ8BTT6 772 aaKnown RBP23.33■■□□□ 1.32
Chpf-201ENSMUST00000079205 ClspnQ80YR7 1315 aa23.23■■□□□ 1.31
Chpf-201ENSMUST00000079205 Top2aQ01320 1528 aaKnown RBP23.21■■□□□ 1.31
Chpf-201ENSMUST00000079205 Fmn1Q05860 1466 aa23.2■■□□□ 1.31
Chpf-201ENSMUST00000079205 Cep162Q6ZQ06 1403 aa23.2■■□□□ 1.3
Chpf-201ENSMUST00000079205 Myt1lP97500 1187 aa23.17■■□□□ 1.3
Chpf-201ENSMUST00000079205 Smarca4Q3TKT4 1613 aaKnown RBP23.16■■□□□ 1.3
Chpf-201ENSMUST00000079205 Bcl11aQ9QYE3 773 aa23.11■■□□□ 1.29
Chpf-201ENSMUST00000079205 Fam71e1A1L3C1 212 aa23.02■■□□□ 1.28
Chpf-201ENSMUST00000079205 Mapk8ip2Q9ERE9 830 aa23■■□□□ 1.27
Chpf-201ENSMUST00000079205 TonslQ6NZL6 1363 aa23■■□□□ 1.27
Chpf-201ENSMUST00000079205 Npm2Q80W85 207 aa22.96■■□□□ 1.27
Chpf-201ENSMUST00000079205 Plekhg3Q4VAC9 1341 aa22.95■■□□□ 1.26
Chpf-201ENSMUST00000079205 Clip1Q922J3 1391 aa22.94■■□□□ 1.26
Chpf-201ENSMUST00000079205 SafbD3YXK2 937 aaKnown RBP22.94■■□□□ 1.26
Chpf-201ENSMUST00000079205 Eif4g1Q6NZJ6 1600 aaKnown RBP22.91■■□□□ 1.26
Chpf-201ENSMUST00000079205 Ncapd3Q6ZQK0 1506 aa22.87■■□□□ 1.25
Chpf-201ENSMUST00000079205 Hnrnpul2Q00PI9 745 aaKnown RBP22.86■■□□□ 1.25
Chpf-201ENSMUST00000079205 Iqgap2Q3UQ44 1575 aa22.82■■□□□ 1.24
Chpf-201ENSMUST00000079205 Ap3b1Q9Z1T1 1105 aa22.7■■□□□ 1.22
Chpf-201ENSMUST00000079205 Arhgap35Q91YM2 1499 aa22.69■■□□□ 1.22
Chpf-201ENSMUST00000079205 Ifnlr1Q8CGK5 535 aa22.66■■□□□ 1.22
Chpf-201ENSMUST00000079205 TnnQ80Z71 1560 aa22.66■■□□□ 1.22
Chpf-201ENSMUST00000079205 Arap1Q4LDD4 1452 aa22.64■■□□□ 1.21
Chpf-201ENSMUST00000079205 PtprkP35822 1457 aa22.62■■□□□ 1.21
Chpf-201ENSMUST00000079205 PrkcshO08795 521 aa22.61■■□□□ 1.21
Chpf-201ENSMUST00000079205 Kdm5bQ80Y84 1544 aa22.59■■□□□ 1.21
Chpf-201ENSMUST00000079205 Eid3Q3V124 375 aa22.59■■□□□ 1.21
Chpf-201ENSMUST00000079205 Eea1Q8BL66 1411 aa22.59■■□□□ 1.21
Chpf-201ENSMUST00000079205 Tnnt3Q9QZ47 272 aa22.58■■□□□ 1.21
Chpf-201ENSMUST00000079205 Il27Q8K3I6 234 aa22.57■■□□□ 1.2
Chpf-201ENSMUST00000079205 Atad2bE9Q166 1460 aaKnown RBP22.56■■□□□ 1.2
Chpf-201ENSMUST00000079205 NrkQ9R0G8 1455 aa22.55■■□□□ 1.2
Chpf-201ENSMUST00000079205 Arhgef5E9Q7D5 1581 aa22.52■■□□□ 1.2
Chpf-201ENSMUST00000079205 Setd5Q5XJV7 1441 aa22.48■■□□□ 1.19
Chpf-201ENSMUST00000079205 Ccdc18Q640L5 1455 aa22.46■■□□□ 1.19
Chpf-201ENSMUST00000079205 Anp32aO35381 247 aa22.4■■□□□ 1.18
Chpf-201ENSMUST00000079205 Shroom4Q1W617 1475 aa22.38■■□□□ 1.17
Chpf-201ENSMUST00000079205 Tiam1Q60610 1591 aa22.36■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms