RNA–Protein interactions for RNA: ENSMUST00000078849.11

Gpc6-201, Transcript of Glypican-6, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Gpc6, Length 1,668 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6-201ENSMUST00000078849 Gm35339A0A140LHH9 1649 aa29.44■■■□□ 2.3
Gpc6-201ENSMUST00000078849 NischQ80TM9 1593 aa29.13■■■□□ 2.25
Gpc6-201ENSMUST00000078849 Abcc9P70170 1546 aa28.36■■■□□ 2.13
Gpc6-201ENSMUST00000078849 Abcc8B2RUS7 1588 aa28.17■■■□□ 2.1
Gpc6-201ENSMUST00000078849 ScribQ80U72 1612 aa27.09■■□□□ 1.93
Gpc6-201ENSMUST00000078849 Rtl1Q7M732 1744 aa26.69■■□□□ 1.86
Gpc6-201ENSMUST00000078849 Rhox8Q6VSS7 320 aa26.54■■□□□ 1.84
Gpc6-201ENSMUST00000078849 Kdm5dQ62240 1548 aa26.21■■□□□ 1.79
Gpc6-201ENSMUST00000078849 NacadQ5SWP3 1504 aa26.2■■□□□ 1.78
Gpc6-201ENSMUST00000078849 Dcaf1Q80TR8 1506 aa26.08■■□□□ 1.77
Gpc6-201ENSMUST00000078849 Ccdc180J3QNE4 1664 aa26■■□□□ 1.75
Gpc6-201ENSMUST00000078849 Sycp2Q9CUU3 1500 aa25.71■■□□□ 1.71
Gpc6-201ENSMUST00000078849 Rb1cc1Q9ESK9 1588 aa25.52■■□□□ 1.68
Gpc6-201ENSMUST00000078849 Zcchc6Q5BLK4 1491 aaKnown RBP25.42■■□□□ 1.66
Gpc6-201ENSMUST00000078849 BicraF8VPZ9 1578 aa25.36■■□□□ 1.65
Gpc6-201ENSMUST00000078849 Baz1aO88379 1555 aa25.3■■□□□ 1.64
Gpc6-201ENSMUST00000078849 Crybg2B7ZCC2 1516 aa25.02■■□□□ 1.6
Gpc6-201ENSMUST00000078849 Smarca2Q6DIC0 1577 aa24.7■■□□□ 1.54
Gpc6-201ENSMUST00000078849 HrcG5E8J6 738 aa24.68■■□□□ 1.54
Gpc6-201ENSMUST00000078849 Pds5bQ4VA53 1446 aaKnown RBP24.55■■□□□ 1.52
Gpc6-201ENSMUST00000078849 Ccdc136Q3TVA9 1136 aa24.53■■□□□ 1.52
Gpc6-201ENSMUST00000078849 Dnajc5bQ9CQ94 199 aa24.53■■□□□ 1.52
Gpc6-201ENSMUST00000078849 Trim41Q5NCC3 630 aa24.37■■□□□ 1.49
Gpc6-201ENSMUST00000078849 Atad2bE9Q166 1460 aaKnown RBP24.37■■□□□ 1.49
Gpc6-201ENSMUST00000078849 Thoc2B1AZI6 1594 aaKnown RBP24.33■■□□□ 1.49
Gpc6-201ENSMUST00000078849 Cecr2E9Q2Z1 1453 aa24.27■■□□□ 1.48
Gpc6-201ENSMUST00000078849 Rpgrip1Q9EPQ2 1331 aa24.22■■□□□ 1.47
Gpc6-201ENSMUST00000078849 Smarca4Q3TKT4 1613 aaKnown RBP24.2■■□□□ 1.46
Gpc6-201ENSMUST00000078849 Brd4Q9ESU6 1400 aaKnown RBP24.12■■□□□ 1.45
Gpc6-201ENSMUST00000078849 Iqgap2Q3UQ44 1575 aa24.07■■□□□ 1.44
Gpc6-201ENSMUST00000078849 Ercc6F8VPZ5 1481 aa24■■□□□ 1.43
Gpc6-201ENSMUST00000078849 Cep164Q5DU05 1446 aa23.99■■□□□ 1.43
Gpc6-201ENSMUST00000078849 Cc2d2aQ8CFW7 1633 aa23.92■■□□□ 1.42
Gpc6-201ENSMUST00000078849 Wdr62Q3U3T8 1523 aa23.86■■□□□ 1.41
Gpc6-201ENSMUST00000078849 Frmpd1A2AKB4 1549 aa23.85■■□□□ 1.41
Gpc6-201ENSMUST00000078849 Fam135aQ6NS59 1506 aa23.8■■□□□ 1.4
Gpc6-201ENSMUST00000078849 Synj1Q8CHC4 1574 aa23.79■■□□□ 1.4
Gpc6-201ENSMUST00000078849 Golga3P55937 1487 aa23.76■■□□□ 1.39
Gpc6-201ENSMUST00000078849 CftrP26361 1476 aa23.71■■□□□ 1.39
Gpc6-201ENSMUST00000078849 Cttnbp2B9EJA2 1648 aa23.71■■□□□ 1.39
Gpc6-201ENSMUST00000078849 Acin1Q9JIX8 1338 aaKnown RBP23.71■■□□□ 1.39
Gpc6-201ENSMUST00000078849 Phldb1Q6PDH0 1371 aaKnown RBP23.65■■□□□ 1.38
Gpc6-201ENSMUST00000078849 Rsf1E9PWW9 1441 aaKnown RBP23.57■■□□□ 1.36
Gpc6-201ENSMUST00000078849 Cngb1E1AZ71 1325 aa23.56■■□□□ 1.36
Gpc6-201ENSMUST00000078849 Top2bQ64511 1612 aa23.56■■□□□ 1.36
Gpc6-201ENSMUST00000078849 Unc13aQ4KUS2 1712 aa23.47■■□□□ 1.35
Gpc6-201ENSMUST00000078849 Baz1bQ9Z277 1479 aa23.46■■□□□ 1.35
Gpc6-201ENSMUST00000078849 Ccdc88bQ4QRL3 1481 aa23.41■■□□□ 1.34
Gpc6-201ENSMUST00000078849 Ubl4bQ9CQ84 188 aa23.41■■□□□ 1.34
Gpc6-201ENSMUST00000078849 Chic1Q8CBW7 227 aa23.38■■□□□ 1.33
Gpc6-201ENSMUST00000078849 Esf1Q3V1V3 845 aaKnown RBP23.37■■□□□ 1.33
Gpc6-201ENSMUST00000078849 Ehmt2Q9Z148 1263 aaKnown RBP23.26■■□□□ 1.31
Gpc6-201ENSMUST00000078849 Mrc2Q64449 1479 aa23.23■■□□□ 1.31
Gpc6-201ENSMUST00000078849 Fmn1Q05860 1466 aa23.22■■□□□ 1.31
Gpc6-201ENSMUST00000078849 Gab3Q8BSM5 595 aa23.08■■□□□ 1.29
Gpc6-201ENSMUST00000078849 Top2aQ01320 1528 aaKnown RBP23.06■■□□□ 1.28
Gpc6-201ENSMUST00000078849 Kif15Q6P9L6 1387 aa23.01■■□□□ 1.27
Gpc6-201ENSMUST00000078849 Rapgef2Q8CHG7 1496 aa22.97■■□□□ 1.27
Gpc6-201ENSMUST00000078849 Cux2P70298 1426 aa22.97■■□□□ 1.27
Gpc6-201ENSMUST00000078849 Lamc3Q9R0B6 1581 aa22.95■■□□□ 1.27
Gpc6-201ENSMUST00000078849 TnnQ80Z71 1560 aa22.9■■□□□ 1.26
Gpc6-201ENSMUST00000078849 Kif21aQ9QXL2 1672 aa22.74■■□□□ 1.23
Gpc6-201ENSMUST00000078849 Cep162Q6ZQ06 1403 aa22.73■■□□□ 1.23
Gpc6-201ENSMUST00000078849 Lrriq1Q0P5X1 1673 aa22.7■■□□□ 1.22
Gpc6-201ENSMUST00000078849 Npm1Q61937 292 aaKnown RBP22.68■■□□□ 1.22
Gpc6-201ENSMUST00000078849 Eif4g1Q6NZJ6 1600 aaKnown RBP22.66■■□□□ 1.22
Gpc6-201ENSMUST00000078849 NefmP08553 848 aa22.62■■□□□ 1.21
Gpc6-201ENSMUST00000078849 Camsap1A2AHC3 1581 aa22.56■■□□□ 1.2
Gpc6-201ENSMUST00000078849 Ccdc18Q640L5 1455 aa22.56■■□□□ 1.2
Gpc6-201ENSMUST00000078849 Il27Q8K3I6 234 aa22.52■■□□□ 1.2
Gpc6-201ENSMUST00000078849 Dhx29Q6PGC1 1365 aaKnown RBP22.51■■□□□ 1.19
Gpc6-201ENSMUST00000078849 Npm2Q80W85 207 aa22.49■■□□□ 1.19
Gpc6-201ENSMUST00000078849 NrkQ9R0G8 1455 aa22.49■■□□□ 1.19
Gpc6-201ENSMUST00000078849 LrpprcQ6PB66 1392 aaKnown RBP22.49■■□□□ 1.19
Gpc6-201ENSMUST00000078849 Mier1Q5UAK0 511 aa22.45■■□□□ 1.18
Gpc6-201ENSMUST00000078849 Urb2E9Q7L1 1524 aaKnown RBP22.44■■□□□ 1.18
Gpc6-201ENSMUST00000078849 Plb1Q3TTY0 1478 aa22.42■■□□□ 1.18
Gpc6-201ENSMUST00000078849 Pcgf6Q99NA9 353 aa22.4■■□□□ 1.18
Gpc6-201ENSMUST00000078849 Shroom4Q1W617 1475 aa22.4■■□□□ 1.18
Gpc6-201ENSMUST00000078849 Map3k1P53349 1493 aa22.38■■□□□ 1.17
Gpc6-201ENSMUST00000078849 Arhgap35Q91YM2 1499 aa22.38■■□□□ 1.17
Gpc6-201ENSMUST00000078849 PogzQ8BZH4 1409 aaKnown RBP22.37■■□□□ 1.17
Gpc6-201ENSMUST00000078849 Eif4g3Q80XI3 1579 aaKnown RBP22.37■■□□□ 1.17
Gpc6-201ENSMUST00000078849 Myt1lP97500 1187 aa22.35■■□□□ 1.17
Gpc6-201ENSMUST00000078849 Crocc2F6XLV1 1638 aa22.34■■□□□ 1.17
Gpc6-201ENSMUST00000078849 Clip1Q922J3 1391 aa22.31■■□□□ 1.16
Gpc6-201ENSMUST00000078849 PtprkP35822 1457 aa22.29■■□□□ 1.16
Gpc6-201ENSMUST00000078849 Grin2bQ01097 1482 aa22.29■■□□□ 1.16
Gpc6-201ENSMUST00000078849 Duox2A2AQ99 1517 aa22.26■■□□□ 1.15
Gpc6-201ENSMUST00000078849 Eea1Q8BL66 1411 aa22.22■■□□□ 1.15
Gpc6-201ENSMUST00000078849 UbtfP25976 765 aaKnown RBP22.2■■□□□ 1.15
Gpc6-201ENSMUST00000078849 Ift140E9PY46 1464 aa22.18■■□□□ 1.14
Gpc6-201ENSMUST00000078849 AqrQ8CFQ3 1481 aaKnown RBP22.17■■□□□ 1.14
Gpc6-201ENSMUST00000078849 Mroh2bQ7M6Y6 1581 aa22.15■■□□□ 1.14
Gpc6-201ENSMUST00000078849 Efcab5A0JP43 1406 aa22.12■■□□□ 1.13
Gpc6-201ENSMUST00000078849 Disp1Q3TDN0 1521 aa22.11■■□□□ 1.13
Gpc6-201ENSMUST00000078849 Arhgef5E9Q7D5 1581 aa22.1■■□□□ 1.13
Gpc6-201ENSMUST00000078849 Samd9lQ69Z37 1561 aa22.1■■□□□ 1.13
Gpc6-201ENSMUST00000078849 Erich3F6QRE9 1637 aa22.1■■□□□ 1.13
Gpc6-201ENSMUST00000078849 Rusc2Q80U22 1514 aa22.08■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms