RNA–Protein interactions for RNA: ENSMUST00000077672.11

Col4a3bp-201, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3bp, Length 2,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-201ENSMUST00000077672 NischQ80TM9 1593 aa32.69■■■□□ 2.82
Col4a3bp-201ENSMUST00000077672 Gm35339A0A140LHH9 1649 aa31.88■■■□□ 2.69
Col4a3bp-201ENSMUST00000077672 Abcc9P70170 1546 aa31.78■■■□□ 2.68
Col4a3bp-201ENSMUST00000077672 Abcc8B2RUS7 1588 aa30.96■■■□□ 2.55
Col4a3bp-201ENSMUST00000077672 Rhox8Q6VSS7 320 aa30.74■■■□□ 2.51
Col4a3bp-201ENSMUST00000077672 Rtl1Q7M732 1744 aa30.53■■■□□ 2.48
Col4a3bp-201ENSMUST00000077672 Ccdc180J3QNE4 1664 aa30.11■■■□□ 2.41
Col4a3bp-201ENSMUST00000077672 Rpgrip1Q9EPQ2 1331 aa29.9■■■□□ 2.38
Col4a3bp-201ENSMUST00000077672 Zcchc6Q5BLK4 1491 aaKnown RBP29.48■■■□□ 2.31
Col4a3bp-201ENSMUST00000077672 Dcaf1Q80TR8 1506 aa28.93■■■□□ 2.22
Col4a3bp-201ENSMUST00000077672 Acin1Q9JIX8 1338 aaKnown RBP28.86■■■□□ 2.21
Col4a3bp-201ENSMUST00000077672 HrcG5E8J6 738 aa28.74■■■□□ 2.19
Col4a3bp-201ENSMUST00000077672 Rb1cc1Q9ESK9 1588 aa28.66■■■□□ 2.18
Col4a3bp-201ENSMUST00000077672 ScribQ80U72 1612 aa28.64■■■□□ 2.18
Col4a3bp-201ENSMUST00000077672 Ccdc136Q3TVA9 1136 aa28.48■■■□□ 2.15
Col4a3bp-201ENSMUST00000077672 Ehmt2Q9Z148 1263 aaKnown RBP28.39■■■□□ 2.13
Col4a3bp-201ENSMUST00000077672 Baz1aO88379 1555 aa28.35■■■□□ 2.13
Col4a3bp-201ENSMUST00000077672 Pcgf6Q99NA9 353 aa28.23■■■□□ 2.11
Col4a3bp-201ENSMUST00000077672 Kdm5dQ62240 1548 aa28.21■■■□□ 2.11
Col4a3bp-201ENSMUST00000077672 Trim41Q5NCC3 630 aa28.05■■■□□ 2.08
Col4a3bp-201ENSMUST00000077672 NacadQ5SWP3 1504 aa27.91■■■□□ 2.06
Col4a3bp-201ENSMUST00000077672 Smarca2Q6DIC0 1577 aa27.76■■■□□ 2.03
Col4a3bp-201ENSMUST00000077672 Cep164Q5DU05 1446 aa27.74■■■□□ 2.03
Col4a3bp-201ENSMUST00000077672 Crybg2B7ZCC2 1516 aa27.74■■■□□ 2.03
Col4a3bp-201ENSMUST00000077672 Supt5hO55201 1082 aaKnown RBP27.38■■□□□ 1.97
Col4a3bp-201ENSMUST00000077672 Sycp2Q9CUU3 1500 aa27.3■■□□□ 1.96
Col4a3bp-201ENSMUST00000077672 Rsf1E9PWW9 1441 aaKnown RBP27.28■■□□□ 1.96
Col4a3bp-201ENSMUST00000077672 Chic1Q8CBW7 227 aa27.25■■□□□ 1.95
Col4a3bp-201ENSMUST00000077672 Neurod1Q60867 357 aa27.19■■□□□ 1.94
Col4a3bp-201ENSMUST00000077672 Cngb1E1AZ71 1325 aa27.18■■□□□ 1.94
Col4a3bp-201ENSMUST00000077672 Brd4Q9ESU6 1400 aaKnown RBP27.12■■□□□ 1.93
Col4a3bp-201ENSMUST00000077672 Gab3Q8BSM5 595 aa27.09■■□□□ 1.93
Col4a3bp-201ENSMUST00000077672 Las1lA2BE28 776 aaKnown RBP27.06■■□□□ 1.92
Col4a3bp-201ENSMUST00000077672 Ccdc88bQ4QRL3 1481 aa27.03■■□□□ 1.92
Col4a3bp-201ENSMUST00000077672 Cecr2E9Q2Z1 1453 aa27.03■■□□□ 1.92
Col4a3bp-201ENSMUST00000077672 Golga3P55937 1487 aa27■■□□□ 1.91
Col4a3bp-201ENSMUST00000077672 Synj1Q8CHC4 1574 aa26.86■■□□□ 1.89
Col4a3bp-201ENSMUST00000077672 NefmP08553 848 aa26.81■■□□□ 1.88
Col4a3bp-201ENSMUST00000077672 Mier1Q5UAK0 511 aa26.8■■□□□ 1.88
Col4a3bp-201ENSMUST00000077672 Zeb1Q64318 1117 aa26.73■■□□□ 1.87
Col4a3bp-201ENSMUST00000077672 CftrP26361 1476 aa26.67■■□□□ 1.86
Col4a3bp-201ENSMUST00000077672 BicraF8VPZ9 1578 aa26.65■■□□□ 1.86
Col4a3bp-201ENSMUST00000077672 Top2bQ64511 1612 aa26.6■■□□□ 1.85
Col4a3bp-201ENSMUST00000077672 Esf1Q3V1V3 845 aaKnown RBP26.58■■□□□ 1.84
Col4a3bp-201ENSMUST00000077672 Anks4bQ8K3X6 423 aa26.54■■□□□ 1.84
Col4a3bp-201ENSMUST00000077672 1700123L14RikQ3V2K7 440 aa26.51■■□□□ 1.83
Col4a3bp-201ENSMUST00000077672 Sall2Q9QX96 1004 aa26.47■■□□□ 1.83
Col4a3bp-201ENSMUST00000077672 Myt1Q8CFC2 1127 aa26.45■■□□□ 1.82
Col4a3bp-201ENSMUST00000077672 Cttnbp2B9EJA2 1648 aa26.43■■□□□ 1.82
Col4a3bp-201ENSMUST00000077672 Rapgef2Q8CHG7 1496 aa26.33■■□□□ 1.81
Col4a3bp-201ENSMUST00000077672 Cc2d2aQ8CFW7 1633 aa26.31■■□□□ 1.8
Col4a3bp-201ENSMUST00000077672 Csrnp3P59055 597 aa26.27■■□□□ 1.8
Col4a3bp-201ENSMUST00000077672 UbtfP25976 765 aaKnown RBP26.25■■□□□ 1.79
Col4a3bp-201ENSMUST00000077672 CenpbP27790 599 aa26.24■■□□□ 1.79
Col4a3bp-201ENSMUST00000077672 Smarca4Q3TKT4 1613 aaKnown RBP26.19■■□□□ 1.78
Col4a3bp-201ENSMUST00000077672 Fmn1Q05860 1466 aa26.19■■□□□ 1.78
Col4a3bp-201ENSMUST00000077672 Top2aQ01320 1528 aaKnown RBP26.15■■□□□ 1.78
Col4a3bp-201ENSMUST00000077672 Aplp2Q06335 707 aa26.14■■□□□ 1.78
Col4a3bp-201ENSMUST00000077672 Cep162Q6ZQ06 1403 aa26.11■■□□□ 1.77
Col4a3bp-201ENSMUST00000077672 Aebp2Q9Z248 504 aaKnown RBP26.06■■□□□ 1.76
Col4a3bp-201ENSMUST00000077672 Myt1lP97500 1187 aa25.99■■□□□ 1.75
Col4a3bp-201ENSMUST00000077672 Wdr66E9Q743 1299 aa25.99■■□□□ 1.75
Col4a3bp-201ENSMUST00000077672 Cdk11bP24788 784 aaKnown RBP25.92■■□□□ 1.74
Col4a3bp-201ENSMUST00000077672 ClspnQ80YR7 1315 aa25.9■■□□□ 1.74
Col4a3bp-201ENSMUST00000077672 Nop58Q6DFW4 536 aaKnown RBP25.82■■□□□ 1.72
Col4a3bp-201ENSMUST00000077672 Npm2Q80W85 207 aa25.81■■□□□ 1.72
Col4a3bp-201ENSMUST00000077672 Eif4g1Q6NZJ6 1600 aaKnown RBP25.81■■□□□ 1.72
Col4a3bp-201ENSMUST00000077672 Clip1Q922J3 1391 aa25.8■■□□□ 1.72
Col4a3bp-201ENSMUST00000077672 Iqgap2Q3UQ44 1575 aa25.79■■□□□ 1.72
Col4a3bp-201ENSMUST00000077672 TonslQ6NZL6 1363 aa25.76■■□□□ 1.71
Col4a3bp-201ENSMUST00000077672 Plekhg3Q4VAC9 1341 aa25.73■■□□□ 1.71
Col4a3bp-201ENSMUST00000077672 Ncapd3Q6ZQK0 1506 aa25.7■■□□□ 1.7
Col4a3bp-201ENSMUST00000077672 Ppargc1bQ8VHJ7 1014 aa25.67■■□□□ 1.7
Col4a3bp-201ENSMUST00000077672 TnnQ80Z71 1560 aa25.6■■□□□ 1.69
Col4a3bp-201ENSMUST00000077672 Atad2bE9Q166 1460 aaKnown RBP25.58■■□□□ 1.69
Col4a3bp-201ENSMUST00000077672 Arhgap35Q91YM2 1499 aa25.55■■□□□ 1.68
Col4a3bp-201ENSMUST00000077672 DiexfQ8BTT6 772 aaKnown RBP25.52■■□□□ 1.68
Col4a3bp-201ENSMUST00000077672 PtprkP35822 1457 aa25.47■■□□□ 1.67
Col4a3bp-201ENSMUST00000077672 Arap1Q4LDD4 1452 aa25.46■■□□□ 1.67
Col4a3bp-201ENSMUST00000077672 NrkQ9R0G8 1455 aa25.46■■□□□ 1.67
Col4a3bp-201ENSMUST00000077672 Eea1Q8BL66 1411 aa25.43■■□□□ 1.66
Col4a3bp-201ENSMUST00000077672 Kdm5bQ80Y84 1544 aa25.37■■□□□ 1.65
Col4a3bp-201ENSMUST00000077672 Arhgef5E9Q7D5 1581 aa25.34■■□□□ 1.65
Col4a3bp-201ENSMUST00000077672 Pds5bQ4VA53 1446 aaKnown RBP25.34■■□□□ 1.65
Col4a3bp-201ENSMUST00000077672 Gm38655A0A286YDK6 273 aa25.34■■□□□ 1.65
Col4a3bp-201ENSMUST00000077672 Ccdc18Q640L5 1455 aa25.31■■□□□ 1.64
Col4a3bp-201ENSMUST00000077672 Setd5Q5XJV7 1441 aa25.3■■□□□ 1.64
Col4a3bp-201ENSMUST00000077672 Ap3b1Q9Z1T1 1105 aa25.29■■□□□ 1.64
Col4a3bp-201ENSMUST00000077672 Lamc3Q9R0B6 1581 aa25.28■■□□□ 1.64
Col4a3bp-201ENSMUST00000077672 Frmpd1A2AKB4 1549 aa25.27■■□□□ 1.64
Col4a3bp-201ENSMUST00000077672 Shroom4Q1W617 1475 aa25.26■■□□□ 1.63
Col4a3bp-201ENSMUST00000077672 Eid3Q3V124 375 aa25.25■■□□□ 1.63
Col4a3bp-201ENSMUST00000077672 Map3k1P53349 1493 aa25.24■■□□□ 1.63
Col4a3bp-201ENSMUST00000077672 Il27Q8K3I6 234 aa25.21■■□□□ 1.63
Col4a3bp-201ENSMUST00000077672 Wdr62Q3U3T8 1523 aa25.21■■□□□ 1.63
Col4a3bp-201ENSMUST00000077672 Bcl11aQ9QYE3 773 aa25.21■■□□□ 1.63
Col4a3bp-201ENSMUST00000077672 Kif15Q6P9L6 1387 aa25.17■■□□□ 1.62
Col4a3bp-201ENSMUST00000077672 Tnnt3Q9QZ47 272 aa25.16■■□□□ 1.62
Col4a3bp-201ENSMUST00000077672 Tiam1Q60610 1591 aa25.16■■□□□ 1.62
Col4a3bp-201ENSMUST00000077672 Camsap1A2AHC3 1581 aa25.15■■□□□ 1.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms