RNA–Protein interactions for RNA: ENSMUST00000072804.10

Sox6-201, Transcript of Transcription factor SOX-6, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Sox6, Length 8,227 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6-201ENSMUST00000072804 Rpgrip1Q9EPQ2 1331 aa14□□□□□ -0.17
Sox6-201ENSMUST00000072804 Cngb1E1AZ71 1325 aa13.71□□□□□ -0.22
Sox6-201ENSMUST00000072804 Las1lA2BE28 776 aaKnown RBP13.7□□□□□ -0.22
Sox6-201ENSMUST00000072804 Pelp1Q9DBD5 1123 aaKnown RBP13.39□□□□□ -0.27
Sox6-201ENSMUST00000072804 Myt1Q8CFC2 1127 aa13.38□□□□□ -0.27
Sox6-201ENSMUST00000072804 Amer1Q7TS75 1132 aa12.94□□□□□ -0.34
Sox6-201ENSMUST00000072804 Wdr66E9Q743 1299 aa12.79□□□□□ -0.36
Sox6-201ENSMUST00000072804 CenpbP27790 599 aa12.67□□□□□ -0.38
Sox6-201ENSMUST00000072804 4930567H17RikQ3V0K5 233 aa12.6□□□□□ -0.39
Sox6-201ENSMUST00000072804 Rhox8Q6VSS7 320 aa12.44□□□□□ -0.42
Sox6-201ENSMUST00000072804 Rtl5Q5DTT4 599 aa12.39□□□□□ -0.43
Sox6-201ENSMUST00000072804 Stra8P70278 393 aa12.26□□□□□ -0.45
Sox6-201ENSMUST00000072804 DiexfQ8BTT6 772 aaKnown RBP12.24□□□□□ -0.45
Sox6-201ENSMUST00000072804 Ythdc1E9Q5K9 736 aaKnown RBP12.02□□□□□ -0.48
Sox6-201ENSMUST00000072804 Rtl1Q7M732 1744 aa12□□□□□ -0.49
Sox6-201ENSMUST00000072804 Tnnt3Q9QZ47 272 aa12□□□□□ -0.49
Sox6-201ENSMUST00000072804 Acin1Q9JIX8 1338 aaKnown RBP11.93□□□□□ -0.5
Sox6-201ENSMUST00000072804 NefmP08553 848 aa11.91□□□□□ -0.5
Sox6-201ENSMUST00000072804 Ccdc9Q8VC31 543 aaKnown RBP11.91□□□□□ -0.5
Sox6-201ENSMUST00000072804 Ccdc180J3QNE4 1664 aa11.74□□□□□ -0.53
Sox6-201ENSMUST00000072804 4933416C03RikQ3V063 378 aa11.72□□□□□ -0.53
Sox6-201ENSMUST00000072804 Cdk11bP24788 784 aaKnown RBP11.64□□□□□ -0.55
Sox6-201ENSMUST00000072804 Neurod1Q60867 357 aa11.63□□□□□ -0.55
Sox6-201ENSMUST00000072804 Zeb1Q64318 1117 aa11.55□□□□□ -0.56
Sox6-201ENSMUST00000072804 Anp32bQ9EST5 272 aaKnown RBP11.53□□□□□ -0.56
Sox6-201ENSMUST00000072804 Ttbk1Q6PCN3 1308 aa11.52□□□□□ -0.57
Sox6-201ENSMUST00000072804 Pcgf6Q99NA9 353 aa11.51□□□□□ -0.57
Sox6-201ENSMUST00000072804 Ehmt2Q9Z148 1263 aaKnown RBP11.5□□□□□ -0.57
Sox6-201ENSMUST00000072804 Myt1lP97500 1187 aa11.49□□□□□ -0.57
Sox6-201ENSMUST00000072804 Anp32aO35381 247 aa11.43□□□□□ -0.58
Sox6-201ENSMUST00000072804 NeflP08551 543 aa11.43□□□□□ -0.58
Sox6-201ENSMUST00000072804 Aplp2Q06335 707 aa11.39□□□□□ -0.59
Sox6-201ENSMUST00000072804 CatipB9EKE5 520 aa11.35□□□□□ -0.59
Sox6-201ENSMUST00000072804 HrcG5E8J6 738 aa11.34□□□□□ -0.59
Sox6-201ENSMUST00000072804 Nop58Q6DFW4 536 aaKnown RBP11.34□□□□□ -0.59
Sox6-201ENSMUST00000072804 Anks4bQ8K3X6 423 aa11.19□□□□□ -0.62
Sox6-201ENSMUST00000072804 Polr3glQ8R0C0 218 aa11.18□□□□□ -0.62
Sox6-201ENSMUST00000072804 NrdcQ8BHG1 1161 aa11.17□□□□□ -0.62
Sox6-201ENSMUST00000072804 Supt5hO55201 1082 aaKnown RBP11.16□□□□□ -0.62
Sox6-201ENSMUST00000072804 DaxxO35613 739 aa11.15□□□□□ -0.62
Sox6-201ENSMUST00000072804 Ube2uB1AUC4 352 aa11.12□□□□□ -0.63
Sox6-201ENSMUST00000072804 Rangap1P46061 589 aaKnown RBP11.1□□□□□ -0.63
Sox6-201ENSMUST00000072804 Hsp90aa1P07901 733 aaKnown RBP11.1□□□□□ -0.63
Sox6-201ENSMUST00000072804 Trim41Q5NCC3 630 aa11.06□□□□□ -0.64
Sox6-201ENSMUST00000072804 Bcl11aQ9QYE3 773 aa11.05□□□□□ -0.64
Sox6-201ENSMUST00000072804 Adam1bQ8R534 806 aa11.01□□□□□ -0.65
Sox6-201ENSMUST00000072804 Eif5bQ05D44 1216 aaKnown RBP11□□□□□ -0.65
Sox6-201ENSMUST00000072804 Esf1Q3V1V3 845 aaKnown RBP11□□□□□ -0.65
Sox6-201ENSMUST00000072804 ClspnQ80YR7 1315 aa10.99□□□□□ -0.65
Sox6-201ENSMUST00000072804 Tnnt2P50752 301 aa10.98□□□□□ -0.65
Sox6-201ENSMUST00000072804 BccipQ9CWI3 316 aa10.97□□□□□ -0.65
Sox6-201ENSMUST00000072804 NclP09405 707 aaKnown RBP10.96□□□□□ -0.65
Sox6-201ENSMUST00000072804 Ccdc27Q3V036 639 aa10.96□□□□□ -0.65
Sox6-201ENSMUST00000072804 Irx3P81067 507 aa10.95□□□□□ -0.66
Sox6-201ENSMUST00000072804 Ccdc136Q3TVA9 1136 aa10.95□□□□□ -0.66
Sox6-201ENSMUST00000072804 Znf316Q6PGE4 1016 aa10.95□□□□□ -0.66
Sox6-201ENSMUST00000072804 Upf2A2AT37 1269 aaKnown RBP10.93□□□□□ -0.66
Sox6-201ENSMUST00000072804 Trim44Q9QXA7 346 aa10.91□□□□□ -0.66
Sox6-201ENSMUST00000072804 Znf326O88291 580 aa10.9□□□□□ -0.66
Sox6-201ENSMUST00000072804 AU015836B2RUM3 263 aa10.88□□□□□ -0.67
Sox6-201ENSMUST00000072804 Map7d2A2AG50 781 aa10.87□□□□□ -0.67
Sox6-201ENSMUST00000072804 4933402E13RikQ9D4D2 429 aa10.86□□□□□ -0.67
Sox6-201ENSMUST00000072804 Htatsf1Q8BGC0 757 aa10.83□□□□□ -0.68
Sox6-201ENSMUST00000072804 Npm2Q80W85 207 aa10.83□□□□□ -0.68
Sox6-201ENSMUST00000072804 TonslQ6NZL6 1363 aa10.82□□□□□ -0.68
Sox6-201ENSMUST00000072804 Q8BT18 775 aa10.8□□□□□ -0.68
Sox6-201ENSMUST00000072804 Gab3Q8BSM5 595 aa10.79□□□□□ -0.68
Sox6-201ENSMUST00000072804 Slc24a1Q91WD8 1130 aa10.79□□□□□ -0.68
Sox6-201ENSMUST00000072804 Pknox2Q8BG99 474 aa10.76□□□□□ -0.69
Sox6-201ENSMUST00000072804 NischQ80TM9 1593 aa10.74□□□□□ -0.69
Sox6-201ENSMUST00000072804 Calcoco2A2A6M5 331 aa10.73□□□□□ -0.69
Sox6-201ENSMUST00000072804 Dcaf1Q80TR8 1506 aa10.72□□□□□ -0.69
Sox6-201ENSMUST00000072804 CalrP14211 416 aaKnown RBP10.72□□□□□ -0.69
Sox6-201ENSMUST00000072804 Hmgb1P63158 215 aaKnown RBP10.71□□□□□ -0.69
Sox6-201ENSMUST00000072804 Wdr43Q6ZQL4 677 aaKnown RBP10.69□□□□□ -0.7
Sox6-201ENSMUST00000072804 Calr4Q3TQS0 420 aa10.66□□□□□ -0.7
Sox6-201ENSMUST00000072804 PtmsQ9D0J8 101 aaKnown RBP10.66□□□□□ -0.7
Sox6-201ENSMUST00000072804 Csrnp3P59055 597 aa10.66□□□□□ -0.7
Sox6-201ENSMUST00000072804 UbtfP25976 765 aaKnown RBP10.63□□□□□ -0.71
Sox6-201ENSMUST00000072804 SetQ9EQU5 289 aaKnown RBP10.62□□□□□ -0.71
Sox6-201ENSMUST00000072804 Rrp12Q6P5B0 1295 aaKnown RBP10.62□□□□□ -0.71
Sox6-201ENSMUST00000072804 Ppm1gQ61074 542 aa10.61□□□□□ -0.71
Sox6-201ENSMUST00000072804 1700123L14RikQ3V2K7 440 aa10.6□□□□□ -0.71
Sox6-201ENSMUST00000072804 Hdac5Q9Z2V6 1113 aa10.59□□□□□ -0.71
Sox6-201ENSMUST00000072804 Ddrgk1Q80WW9 315 aa10.59□□□□□ -0.71
Sox6-201ENSMUST00000072804 Lmod3E9QA62 571 aa10.58□□□□□ -0.72
Sox6-201ENSMUST00000072804 MsnP26041 577 aaKnown RBP10.58□□□□□ -0.72
Sox6-201ENSMUST00000072804 Dusp9Q7TNL7 452 aa10.57□□□□□ -0.72
Sox6-201ENSMUST00000072804 Pdcl3Q8BVF2 240 aa10.51□□□□□ -0.73
Sox6-201ENSMUST00000072804 Gtf3c3Q3TMP1 882 aa10.51□□□□□ -0.73
Sox6-201ENSMUST00000072804 Dnttip2Q8R2M2 758 aaKnown RBP10.5□□□□□ -0.73
Sox6-201ENSMUST00000072804 Gtf3c5Q8R2T8 520 aa10.5□□□□□ -0.73
Sox6-201ENSMUST00000072804 Ccer2J3QPU5 274 aa10.5□□□□□ -0.73
Sox6-201ENSMUST00000072804 Ppp4r2Q0VGB7 417 aa10.49□□□□□ -0.73
Sox6-201ENSMUST00000072804 Gm973E9Q295 1059 aa10.48□□□□□ -0.73
Sox6-201ENSMUST00000072804 Fam71e1A1L3C1 212 aa10.47□□□□□ -0.73
Sox6-201ENSMUST00000072804 Mbd3Q9Z2D8 285 aaKnown RBP10.45□□□□□ -0.74
Sox6-201ENSMUST00000072804 Rrp9Q91WM3 475 aaKnown RBP10.44□□□□□ -0.74
Sox6-201ENSMUST00000072804 CanxP35564 591 aaKnown RBP10.44□□□□□ -0.74
Sox6-201ENSMUST00000072804 Zbtb7cQ8VCZ7 619 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms