RNA–Protein interactions for RNA: ENSMUST00000071006.7

Snrpc-201, Transcript of U1 small nuclear ribonucleoprotein C, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrpc, Length 870 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrpc-201ENSMUST00000071006 Gm35339A0A140LHH9 1649 aa43.2■■■■■ 4.51
Snrpc-201ENSMUST00000071006 NischQ80TM9 1593 aa42.63■■■■■ 4.41
Snrpc-201ENSMUST00000071006 Abcc8B2RUS7 1588 aa41.29■■■■■ 4.2
Snrpc-201ENSMUST00000071006 Abcc9P70170 1546 aa41.18■■■■■ 4.18
Snrpc-201ENSMUST00000071006 ScribQ80U72 1612 aa39.93■■■■□ 3.98
Snrpc-201ENSMUST00000071006 NacadQ5SWP3 1504 aa38.61■■■■□ 3.77
Snrpc-201ENSMUST00000071006 Kdm5dQ62240 1548 aa38.54■■■■□ 3.76
Snrpc-201ENSMUST00000071006 Sycp2Q9CUU3 1500 aa37.89■■■■□ 3.66
Snrpc-201ENSMUST00000071006 Dcaf1Q80TR8 1506 aa37.84■■■■□ 3.65
Snrpc-201ENSMUST00000071006 BicraF8VPZ9 1578 aa37.46■■■■□ 3.59
Snrpc-201ENSMUST00000071006 Rb1cc1Q9ESK9 1588 aa37.09■■■■□ 3.53
Snrpc-201ENSMUST00000071006 Dnajc5bQ9CQ94 199 aa36.9■■■■□ 3.5
Snrpc-201ENSMUST00000071006 Rhox8Q6VSS7 320 aa36.73■■■■□ 3.47
Snrpc-201ENSMUST00000071006 Baz1aO88379 1555 aa36.56■■■■□ 3.44
Snrpc-201ENSMUST00000071006 Crybg2B7ZCC2 1516 aa36.48■■■■□ 3.43
Snrpc-201ENSMUST00000071006 Ccdc180J3QNE4 1664 aa36.43■■■■□ 3.42
Snrpc-201ENSMUST00000071006 Pds5bQ4VA53 1446 aaKnown RBP36.34■■■■□ 3.41
Snrpc-201ENSMUST00000071006 Zcchc6Q5BLK4 1491 aaKnown RBP36.1■■■■□ 3.37
Snrpc-201ENSMUST00000071006 Thoc2B1AZI6 1594 aaKnown RBP36.1■■■■□ 3.37
Snrpc-201ENSMUST00000071006 Atad2bE9Q166 1460 aaKnown RBP35.99■■■■□ 3.35
Snrpc-201ENSMUST00000071006 Cecr2E9Q2Z1 1453 aa35.6■■■■□ 3.29
Snrpc-201ENSMUST00000071006 Smarca4Q3TKT4 1613 aaKnown RBP35.58■■■■□ 3.29
Snrpc-201ENSMUST00000071006 Smarca2Q6DIC0 1577 aa35.58■■■■□ 3.29
Snrpc-201ENSMUST00000071006 Cc2d2aQ8CFW7 1633 aa35.57■■■■□ 3.28
Snrpc-201ENSMUST00000071006 Ercc6F8VPZ5 1481 aa35.5■■■■□ 3.27
Snrpc-201ENSMUST00000071006 Iqgap2Q3UQ44 1575 aa35.42■■■■□ 3.26
Snrpc-201ENSMUST00000071006 Fam135aQ6NS59 1506 aa35.22■■■■□ 3.23
Snrpc-201ENSMUST00000071006 Frmpd1A2AKB4 1549 aa35.19■■■■□ 3.22
Snrpc-201ENSMUST00000071006 Wdr62Q3U3T8 1523 aa35.16■■■■□ 3.22
Snrpc-201ENSMUST00000071006 Phldb1Q6PDH0 1371 aaKnown RBP35■■■■□ 3.19
Snrpc-201ENSMUST00000071006 Ubl4bQ9CQ84 188 aa34.8■■■■□ 3.16
Snrpc-201ENSMUST00000071006 Unc13aQ4KUS2 1712 aa34.69■■■■□ 3.14
Snrpc-201ENSMUST00000071006 CftrP26361 1476 aa34.66■■■■□ 3.14
Snrpc-201ENSMUST00000071006 Baz1bQ9Z277 1479 aa34.66■■■■□ 3.14
Snrpc-201ENSMUST00000071006 Rtl1Q7M732 1744 aa34.64■■■■□ 3.14
Snrpc-201ENSMUST00000071006 Synj1Q8CHC4 1574 aa34.57■■■■□ 3.13
Snrpc-201ENSMUST00000071006 Cttnbp2B9EJA2 1648 aa34.53■■■■□ 3.12
Snrpc-201ENSMUST00000071006 Ccdc136Q3TVA9 1136 aa34.51■■■■□ 3.12
Snrpc-201ENSMUST00000071006 Brd4Q9ESU6 1400 aaKnown RBP34.45■■■■□ 3.11
Snrpc-201ENSMUST00000071006 Mrc2Q64449 1479 aa34.42■■■■□ 3.1
Snrpc-201ENSMUST00000071006 Esf1Q3V1V3 845 aaKnown RBP34.08■■■■□ 3.05
Snrpc-201ENSMUST00000071006 Cux2P70298 1426 aa33.88■■■■□ 3.01
Snrpc-201ENSMUST00000071006 Rsf1E9PWW9 1441 aaKnown RBP33.86■■■■□ 3.01
Snrpc-201ENSMUST00000071006 Kif15Q6P9L6 1387 aa33.85■■■■□ 3.01
Snrpc-201ENSMUST00000071006 Trim41Q5NCC3 630 aa33.85■■■■□ 3.01
Snrpc-201ENSMUST00000071006 Lrriq1Q0P5X1 1673 aa33.7■■■□□ 2.99
Snrpc-201ENSMUST00000071006 Lamc3Q9R0B6 1581 aa33.66■■■□□ 2.98
Snrpc-201ENSMUST00000071006 Kif21aQ9QXL2 1672 aa33.62■■■□□ 2.97
Snrpc-201ENSMUST00000071006 Npm1Q61937 292 aaKnown RBP33.53■■■□□ 2.96
Snrpc-201ENSMUST00000071006 Dnajc5P60904 198 aa33.43■■■□□ 2.94
Snrpc-201ENSMUST00000071006 Cep164Q5DU05 1446 aa33.33■■■□□ 2.93
Snrpc-201ENSMUST00000071006 Golga3P55937 1487 aa33.23■■■□□ 2.91
Snrpc-201ENSMUST00000071006 Il27Q8K3I6 234 aa33.22■■■□□ 2.91
Snrpc-201ENSMUST00000071006 Top2bQ64511 1612 aa33.2■■■□□ 2.91
Snrpc-201ENSMUST00000071006 TnnQ80Z71 1560 aa33.2■■■□□ 2.91
Snrpc-201ENSMUST00000071006 Eif4g3Q80XI3 1579 aaKnown RBP33.17■■■□□ 2.9
Snrpc-201ENSMUST00000071006 Cngb1E1AZ71 1325 aa33.15■■■□□ 2.9
Snrpc-201ENSMUST00000071006 Dhx29Q6PGC1 1365 aaKnown RBP33.15■■■□□ 2.9
Snrpc-201ENSMUST00000071006 Urb2E9Q7L1 1524 aaKnown RBP33.14■■■□□ 2.9
Snrpc-201ENSMUST00000071006 Ccdc18Q640L5 1455 aa33.11■■■□□ 2.89
Snrpc-201ENSMUST00000071006 Plb1Q3TTY0 1478 aa33.1■■■□□ 2.89
Snrpc-201ENSMUST00000071006 LrpprcQ6PB66 1392 aaKnown RBP33.08■■■□□ 2.89
Snrpc-201ENSMUST00000071006 Camsap1A2AHC3 1581 aa33.01■■■□□ 2.88
Snrpc-201ENSMUST00000071006 Crocc2F6XLV1 1638 aa32.91■■■□□ 2.86
Snrpc-201ENSMUST00000071006 Shroom2A2ALU4 1481 aa32.88■■■□□ 2.85
Snrpc-201ENSMUST00000071006 PogzQ8BZH4 1409 aaKnown RBP32.85■■■□□ 2.85
Snrpc-201ENSMUST00000071006 Fmn1Q05860 1466 aa32.84■■■□□ 2.85
Snrpc-201ENSMUST00000071006 Ift140E9PY46 1464 aa32.7■■■□□ 2.83
Snrpc-201ENSMUST00000071006 Duox2A2AQ99 1517 aa32.7■■■□□ 2.83
Snrpc-201ENSMUST00000071006 Pabpn1Q8CCS6 302 aaKnown RBP32.63■■■□□ 2.81
Snrpc-201ENSMUST00000071006 Rusc2Q80U22 1514 aa32.59■■■□□ 2.81
Snrpc-201ENSMUST00000071006 Grin2bQ01097 1482 aa32.59■■■□□ 2.81
Snrpc-201ENSMUST00000071006 Disp1Q3TDN0 1521 aa32.56■■■□□ 2.8
Snrpc-201ENSMUST00000071006 Col17a1Q07563 1470 aa32.54■■■□□ 2.8
Snrpc-201ENSMUST00000071006 Setd1bQ8CFT2 1985 aa32.43■■■□□ 2.78
Snrpc-201ENSMUST00000071006 Pelp1Q9DBD5 1123 aaKnown RBP32.4■■■□□ 2.78
Snrpc-201ENSMUST00000071006 Efcab5A0JP43 1406 aa32.4■■■□□ 2.78
Snrpc-201ENSMUST00000071006 Samd9lQ69Z37 1561 aa32.4■■■□□ 2.78
Snrpc-201ENSMUST00000071006 Ccdc88bQ4QRL3 1481 aa32.39■■■□□ 2.78
Snrpc-201ENSMUST00000071006 Nup160Q9Z0W3 1402 aaKnown RBP32.35■■■□□ 2.77
Snrpc-201ENSMUST00000071006 Rad54l2Q99NG0 1466 aa32.29■■■□□ 2.76
Snrpc-201ENSMUST00000071006 Cc2d2bA0A286YDU8 1405 aa32.28■■■□□ 2.76
Snrpc-201ENSMUST00000071006 Chic1Q8CBW7 227 aa32.24■■■□□ 2.75
Snrpc-201ENSMUST00000071006 Pbrm1Q8BSQ9 1634 aaKnown RBP32.22■■■□□ 2.75
Snrpc-201ENSMUST00000071006 Top2aQ01320 1528 aaKnown RBP32.19■■■□□ 2.74
Snrpc-201ENSMUST00000071006 NrkQ9R0G8 1455 aa32.16■■■□□ 2.74
Snrpc-201ENSMUST00000071006 Magi3Q9EQJ9 1476 aa32.14■■■□□ 2.74
Snrpc-201ENSMUST00000071006 Grin2aP35436 1464 aa32.12■■■□□ 2.73
Snrpc-201ENSMUST00000071006 PtprkP35822 1457 aa32.11■■■□□ 2.73
Snrpc-201ENSMUST00000071006 Zcchc11B2RX14 1644 aaKnown RBP32.06■■■□□ 2.72
Snrpc-201ENSMUST00000071006 AqrQ8CFQ3 1481 aaKnown RBP32.04■■■□□ 2.72
Snrpc-201ENSMUST00000071006 Shroom4Q1W617 1475 aa32■■■□□ 2.71
Snrpc-201ENSMUST00000071006 Fgd6Q69ZL1 1399 aa32■■■□□ 2.71
Snrpc-201ENSMUST00000071006 Pla2r1Q62028 1487 aa31.92■■■□□ 2.7
Snrpc-201ENSMUST00000071006 SynmQ70IV5 1561 aa31.87■■■□□ 2.69
Snrpc-201ENSMUST00000071006 Adgrl3Q80TS3 1537 aa31.81■■■□□ 2.68
Snrpc-201ENSMUST00000071006 Gm156Q58A37 223 aa31.81■■■□□ 2.68
Snrpc-201ENSMUST00000071006 Gpatch8A2A6A1 1505 aa31.79■■■□□ 2.68
Snrpc-201ENSMUST00000071006 Gapvd1Q6PAR5 1458 aa31.78■■■□□ 2.68
Snrpc-201ENSMUST00000071006 AknaQ80VW7 1404 aa31.76■■■□□ 2.68
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms