RNA–Protein interactions for RNA: ENSMUST00000069168.12

Cpsf6-201, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-201ENSMUST00000069168 NischQ80TM9 1593 aa12.5□□□□□ -0.41
Cpsf6-201ENSMUST00000069168 Gm35339A0A140LHH9 1649 aa12.43□□□□□ -0.42
Cpsf6-201ENSMUST00000069168 Abcc9P70170 1546 aa12.23□□□□□ -0.45
Cpsf6-201ENSMUST00000069168 Abcc8B2RUS7 1588 aa11.92□□□□□ -0.5
Cpsf6-201ENSMUST00000069168 Rhox8Q6VSS7 320 aa11.88□□□□□ -0.51
Cpsf6-201ENSMUST00000069168 Rtl1Q7M732 1744 aa11.63□□□□□ -0.55
Cpsf6-201ENSMUST00000069168 Rpgrip1Q9EPQ2 1331 aa11.62□□□□□ -0.55
Cpsf6-201ENSMUST00000069168 Ccdc180J3QNE4 1664 aa11.4□□□□□ -0.58
Cpsf6-201ENSMUST00000069168 Zcchc6Q5BLK4 1491 aaKnown RBP11.33□□□□□ -0.6
Cpsf6-201ENSMUST00000069168 Dcaf1Q80TR8 1506 aa11.19□□□□□ -0.62
Cpsf6-201ENSMUST00000069168 ScribQ80U72 1612 aa11.11□□□□□ -0.63
Cpsf6-201ENSMUST00000069168 Rb1cc1Q9ESK9 1588 aa10.94□□□□□ -0.66
Cpsf6-201ENSMUST00000069168 Acin1Q9JIX8 1338 aaKnown RBP10.89□□□□□ -0.67
Cpsf6-201ENSMUST00000069168 Baz1aO88379 1555 aa10.86□□□□□ -0.67
Cpsf6-201ENSMUST00000069168 Kdm5dQ62240 1548 aa10.83□□□□□ -0.68
Cpsf6-201ENSMUST00000069168 HrcG5E8J6 738 aa10.81□□□□□ -0.68
Cpsf6-201ENSMUST00000069168 Ehmt2Q9Z148 1263 aaKnown RBP10.77□□□□□ -0.69
Cpsf6-201ENSMUST00000069168 Las1lA2BE28 776 aaKnown RBP10.73□□□□□ -0.69
Cpsf6-201ENSMUST00000069168 Ccdc136Q3TVA9 1136 aa10.71□□□□□ -0.69
Cpsf6-201ENSMUST00000069168 Crybg2B7ZCC2 1516 aa10.71□□□□□ -0.7
Cpsf6-201ENSMUST00000069168 Trim41Q5NCC3 630 aa10.69□□□□□ -0.7
Cpsf6-201ENSMUST00000069168 NacadQ5SWP3 1504 aa10.69□□□□□ -0.7
Cpsf6-201ENSMUST00000069168 Smarca2Q6DIC0 1577 aa10.68□□□□□ -0.7
Cpsf6-201ENSMUST00000069168 Cngb1E1AZ71 1325 aa10.68□□□□□ -0.7
Cpsf6-201ENSMUST00000069168 NefmP08553 848 aa10.5□□□□□ -0.73
Cpsf6-201ENSMUST00000069168 Sycp2Q9CUU3 1500 aa10.49□□□□□ -0.73
Cpsf6-201ENSMUST00000069168 Cep164Q5DU05 1446 aa10.49□□□□□ -0.73
Cpsf6-201ENSMUST00000069168 Pcgf6Q99NA9 353 aa10.44□□□□□ -0.74
Cpsf6-201ENSMUST00000069168 Zeb1Q64318 1117 aa10.41□□□□□ -0.74
Cpsf6-201ENSMUST00000069168 BicraF8VPZ9 1578 aa10.38□□□□□ -0.75
Cpsf6-201ENSMUST00000069168 Esf1Q3V1V3 845 aaKnown RBP10.37□□□□□ -0.75
Cpsf6-201ENSMUST00000069168 Wdr66E9Q743 1299 aa10.37□□□□□ -0.75
Cpsf6-201ENSMUST00000069168 Gab3Q8BSM5 595 aa10.37□□□□□ -0.75
Cpsf6-201ENSMUST00000069168 Rsf1E9PWW9 1441 aaKnown RBP10.35□□□□□ -0.75
Cpsf6-201ENSMUST00000069168 Cecr2E9Q2Z1 1453 aa10.34□□□□□ -0.75
Cpsf6-201ENSMUST00000069168 Ccdc88bQ4QRL3 1481 aa10.27□□□□□ -0.77
Cpsf6-201ENSMUST00000069168 Synj1Q8CHC4 1574 aa10.27□□□□□ -0.77
Cpsf6-201ENSMUST00000069168 Brd4Q9ESU6 1400 aaKnown RBP10.26□□□□□ -0.77
Cpsf6-201ENSMUST00000069168 Chic1Q8CBW7 227 aa10.25□□□□□ -0.77
Cpsf6-201ENSMUST00000069168 Top2bQ64511 1612 aa10.25□□□□□ -0.77
Cpsf6-201ENSMUST00000069168 Golga3P55937 1487 aa10.25□□□□□ -0.77
Cpsf6-201ENSMUST00000069168 CenpbP27790 599 aa10.21□□□□□ -0.78
Cpsf6-201ENSMUST00000069168 CftrP26361 1476 aa10.19□□□□□ -0.78
Cpsf6-201ENSMUST00000069168 Myt1Q8CFC2 1127 aa10.18□□□□□ -0.78
Cpsf6-201ENSMUST00000069168 Supt5hO55201 1082 aaKnown RBP10.17□□□□□ -0.78
Cpsf6-201ENSMUST00000069168 Npm2Q80W85 207 aa10.16□□□□□ -0.78
Cpsf6-201ENSMUST00000069168 Pelp1Q9DBD5 1123 aaKnown RBP10.16□□□□□ -0.78
Cpsf6-201ENSMUST00000069168 Dnajc5bQ9CQ94 199 aa10.16□□□□□ -0.78
Cpsf6-201ENSMUST00000069168 Cttnbp2B9EJA2 1648 aa10.13□□□□□ -0.79
Cpsf6-201ENSMUST00000069168 UbtfP25976 765 aaKnown RBP10.1□□□□□ -0.79
Cpsf6-201ENSMUST00000069168 Cdk11bP24788 784 aaKnown RBP10.1□□□□□ -0.79
Cpsf6-201ENSMUST00000069168 Myt1lP97500 1187 aa10.08□□□□□ -0.8
Cpsf6-201ENSMUST00000069168 Stra8P70278 393 aa10.07□□□□□ -0.8
Cpsf6-201ENSMUST00000069168 Cc2d2aQ8CFW7 1633 aa10.06□□□□□ -0.8
Cpsf6-201ENSMUST00000069168 Mier1Q5UAK0 511 aa10.05□□□□□ -0.8
Cpsf6-201ENSMUST00000069168 Smarca4Q3TKT4 1613 aaKnown RBP10.03□□□□□ -0.8
Cpsf6-201ENSMUST00000069168 Rapgef2Q8CHG7 1496 aa10.03□□□□□ -0.8
Cpsf6-201ENSMUST00000069168 Top2aQ01320 1528 aaKnown RBP10□□□□□ -0.81
Cpsf6-201ENSMUST00000069168 Tnnt3Q9QZ47 272 aa10□□□□□ -0.81
Cpsf6-201ENSMUST00000069168 Nop58Q6DFW4 536 aaKnown RBP10□□□□□ -0.81
Cpsf6-201ENSMUST00000069168 Eif4g1Q6NZJ6 1600 aaKnown RBP9.99□□□□□ -0.81
Cpsf6-201ENSMUST00000069168 Pds5bQ4VA53 1446 aaKnown RBP9.97□□□□□ -0.81
Cpsf6-201ENSMUST00000069168 Fmn1Q05860 1466 aa9.96□□□□□ -0.82
Cpsf6-201ENSMUST00000069168 TonslQ6NZL6 1363 aa9.95□□□□□ -0.82
Cpsf6-201ENSMUST00000069168 ClspnQ80YR7 1315 aa9.94□□□□□ -0.82
Cpsf6-201ENSMUST00000069168 Iqgap2Q3UQ44 1575 aa9.92□□□□□ -0.82
Cpsf6-201ENSMUST00000069168 Neurod1Q60867 357 aa9.92□□□□□ -0.82
Cpsf6-201ENSMUST00000069168 Anks4bQ8K3X6 423 aa9.9□□□□□ -0.82
Cpsf6-201ENSMUST00000069168 Cep162Q6ZQ06 1403 aa9.89□□□□□ -0.83
Cpsf6-201ENSMUST00000069168 TnnQ80Z71 1560 aa9.89□□□□□ -0.83
Cpsf6-201ENSMUST00000069168 Ercc6F8VPZ5 1481 aa9.89□□□□□ -0.83
Cpsf6-201ENSMUST00000069168 Thoc2B1AZI6 1594 aaKnown RBP9.88□□□□□ -0.83
Cpsf6-201ENSMUST00000069168 Ube2uB1AUC4 352 aa9.88□□□□□ -0.83
Cpsf6-201ENSMUST00000069168 Atad2bE9Q166 1460 aaKnown RBP9.87□□□□□ -0.83
Cpsf6-201ENSMUST00000069168 Sall2Q9QX96 1004 aa9.85□□□□□ -0.83
Cpsf6-201ENSMUST00000069168 Unc13aQ4KUS2 1712 aa9.84□□□□□ -0.83
Cpsf6-201ENSMUST00000069168 Aplp2Q06335 707 aa9.79□□□□□ -0.84
Cpsf6-201ENSMUST00000069168 Rtl5Q5DTT4 599 aa9.79□□□□□ -0.84
Cpsf6-201ENSMUST00000069168 Ubl4bQ9CQ84 188 aa9.78□□□□□ -0.84
Cpsf6-201ENSMUST00000069168 Frmpd1A2AKB4 1549 aa9.78□□□□□ -0.84
Cpsf6-201ENSMUST00000069168 Kdm5bQ80Y84 1544 aa9.77□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 Ncapd3Q6ZQK0 1506 aa9.77□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 Wdr62Q3U3T8 1523 aa9.75□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 NrkQ9R0G8 1455 aa9.74□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 Aebp2Q9Z248 504 aaKnown RBP9.73□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 Arhgap35Q91YM2 1499 aa9.73□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 NclP09405 707 aaKnown RBP9.72□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 PtprkP35822 1457 aa9.72□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 Clip1Q922J3 1391 aa9.71□□□□□ -0.85
Cpsf6-201ENSMUST00000069168 Lamc3Q9R0B6 1581 aa9.71□□□□□ -0.86
Cpsf6-201ENSMUST00000069168 Csrnp3P59055 597 aa9.69□□□□□ -0.86
Cpsf6-201ENSMUST00000069168 Arap1Q4LDD4 1452 aa9.68□□□□□ -0.86
Cpsf6-201ENSMUST00000069168 Il27Q8K3I6 234 aa9.68□□□□□ -0.86
Cpsf6-201ENSMUST00000069168 Ap3b1Q9Z1T1 1105 aa9.67□□□□□ -0.86
Cpsf6-201ENSMUST00000069168 Fam50aQ9WV03 339 aaKnown RBP9.66□□□□□ -0.86
Cpsf6-201ENSMUST00000069168 Plekhg3Q4VAC9 1341 aa9.66□□□□□ -0.86
Cpsf6-201ENSMUST00000069168 Anp32aO35381 247 aa9.66□□□□□ -0.86
Cpsf6-201ENSMUST00000069168 Arhgef5E9Q7D5 1581 aa9.65□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 TchhA0A0B4J1F9 1599 aa9.64□□□□□ -0.87
Cpsf6-201ENSMUST00000069168 Camsap1A2AHC3 1581 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 74.1 ms