RNA–Protein interactions for RNA: ENSMUST00000068452.9

Cnot1-201, Transcript of CCR4-NOT transcription complex subunit 1, mousemouse

TSL 1 (best) BASIC

Gene Cnot1, Length 8,152 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot1-201ENSMUST00000068452 NischQ80TM9 1593 aa8.8□□□□□ -1
Cnot1-201ENSMUST00000068452 Rhox8Q6VSS7 320 aa8.49□□□□□ -1.05
Cnot1-201ENSMUST00000068452 Gm35339A0A140LHH9 1649 aa8.46□□□□□ -1.06
Cnot1-201ENSMUST00000068452 Abcc9P70170 1546 aa8.39□□□□□ -1.07
Cnot1-201ENSMUST00000068452 Abcc8B2RUS7 1588 aa8.31□□□□□ -1.08
Cnot1-201ENSMUST00000068452 NacadQ5SWP3 1504 aa7.97□□□□□ -1.13
Cnot1-201ENSMUST00000068452 Cngb1E1AZ71 1325 aa7.85□□□□□ -1.15
Cnot1-201ENSMUST00000068452 Pelp1Q9DBD5 1123 aaKnown RBP7.83□□□□□ -1.16
Cnot1-201ENSMUST00000068452 Esf1Q3V1V3 845 aaKnown RBP7.82□□□□□ -1.16
Cnot1-201ENSMUST00000068452 Dcaf1Q80TR8 1506 aa7.81□□□□□ -1.16
Cnot1-201ENSMUST00000068452 Rpgrip1Q9EPQ2 1331 aa7.8□□□□□ -1.16
Cnot1-201ENSMUST00000068452 Trim41Q5NCC3 630 aa7.79□□□□□ -1.16
Cnot1-201ENSMUST00000068452 Zcchc6Q5BLK4 1491 aaKnown RBP7.78□□□□□ -1.16
Cnot1-201ENSMUST00000068452 Kdm5dQ62240 1548 aa7.74□□□□□ -1.17
Cnot1-201ENSMUST00000068452 Rb1cc1Q9ESK9 1588 aa7.71□□□□□ -1.18
Cnot1-201ENSMUST00000068452 Ercc6F8VPZ5 1481 aa7.66□□□□□ -1.18
Cnot1-201ENSMUST00000068452 Pds5bQ4VA53 1446 aaKnown RBP7.66□□□□□ -1.18
Cnot1-201ENSMUST00000068452 Sycp2Q9CUU3 1500 aa7.66□□□□□ -1.18
Cnot1-201ENSMUST00000068452 Ccdc136Q3TVA9 1136 aa7.64□□□□□ -1.19
Cnot1-201ENSMUST00000068452 ScribQ80U72 1612 aa7.63□□□□□ -1.19
Cnot1-201ENSMUST00000068452 Las1lA2BE28 776 aaKnown RBP7.62□□□□□ -1.19
Cnot1-201ENSMUST00000068452 Baz1aO88379 1555 aa7.61□□□□□ -1.19
Cnot1-201ENSMUST00000068452 Wdr66E9Q743 1299 aa7.61□□□□□ -1.19
Cnot1-201ENSMUST00000068452 Brd4Q9ESU6 1400 aaKnown RBP7.55□□□□□ -1.2
Cnot1-201ENSMUST00000068452 Crybg2B7ZCC2 1516 aa7.54□□□□□ -1.2
Cnot1-201ENSMUST00000068452 Rtl1Q7M732 1744 aa7.52□□□□□ -1.21
Cnot1-201ENSMUST00000068452 Zeb1Q64318 1117 aa7.49□□□□□ -1.21
Cnot1-201ENSMUST00000068452 Npm1Q61937 292 aaKnown RBP7.46□□□□□ -1.22
Cnot1-201ENSMUST00000068452 Ubl4bQ9CQ84 188 aa7.45□□□□□ -1.22
Cnot1-201ENSMUST00000068452 Atad2bE9Q166 1460 aaKnown RBP7.45□□□□□ -1.22
Cnot1-201ENSMUST00000068452 Npm2Q80W85 207 aa7.43□□□□□ -1.22
Cnot1-201ENSMUST00000068452 Myt1Q8CFC2 1127 aa7.43□□□□□ -1.22
Cnot1-201ENSMUST00000068452 4930567H17RikQ3V0K5 233 aa7.42□□□□□ -1.22
Cnot1-201ENSMUST00000068452 Ccdc180J3QNE4 1664 aa7.41□□□□□ -1.22
Cnot1-201ENSMUST00000068452 Smarca2Q6DIC0 1577 aa7.39□□□□□ -1.23
Cnot1-201ENSMUST00000068452 Il27Q8K3I6 234 aa7.37□□□□□ -1.23
Cnot1-201ENSMUST00000068452 Rsf1E9PWW9 1441 aaKnown RBP7.37□□□□□ -1.23
Cnot1-201ENSMUST00000068452 Phldb1Q6PDH0 1371 aaKnown RBP7.36□□□□□ -1.23
Cnot1-201ENSMUST00000068452 Baz1bQ9Z277 1479 aa7.35□□□□□ -1.23
Cnot1-201ENSMUST00000068452 Smarca4Q3TKT4 1613 aaKnown RBP7.33□□□□□ -1.24
Cnot1-201ENSMUST00000068452 Amer1Q7TS75 1132 aa7.31□□□□□ -1.24
Cnot1-201ENSMUST00000068452 Cep164Q5DU05 1446 aa7.3□□□□□ -1.24
Cnot1-201ENSMUST00000068452 DiexfQ8BTT6 772 aaKnown RBP7.29□□□□□ -1.24
Cnot1-201ENSMUST00000068452 Ccdc18Q640L5 1455 aa7.28□□□□□ -1.24
Cnot1-201ENSMUST00000068452 Kif15Q6P9L6 1387 aa7.27□□□□□ -1.25
Cnot1-201ENSMUST00000068452 Iqgap2Q3UQ44 1575 aa7.24□□□□□ -1.25
Cnot1-201ENSMUST00000068452 CenpbP27790 599 aa7.23□□□□□ -1.25
Cnot1-201ENSMUST00000068452 Ube2uB1AUC4 352 aa7.21□□□□□ -1.26
Cnot1-201ENSMUST00000068452 BicraF8VPZ9 1578 aa7.2□□□□□ -1.26
Cnot1-201ENSMUST00000068452 Stra8P70278 393 aa7.2□□□□□ -1.26
Cnot1-201ENSMUST00000068452 HrcG5E8J6 738 aa7.19□□□□□ -1.26
Cnot1-201ENSMUST00000068452 Gab3Q8BSM5 595 aa7.18□□□□□ -1.26
Cnot1-201ENSMUST00000068452 Myt1lP97500 1187 aa7.17□□□□□ -1.26
Cnot1-201ENSMUST00000068452 CftrP26361 1476 aa7.17□□□□□ -1.26
Cnot1-201ENSMUST00000068452 Ttbk1Q6PCN3 1308 aa7.17□□□□□ -1.26
Cnot1-201ENSMUST00000068452 Golga3P55937 1487 aa7.17□□□□□ -1.26
Cnot1-201ENSMUST00000068452 Cttnbp2B9EJA2 1648 aa7.16□□□□□ -1.26
Cnot1-201ENSMUST00000068452 Mrc2Q64449 1479 aa7.13□□□□□ -1.27
Cnot1-201ENSMUST00000068452 Cux2P70298 1426 aa7.13□□□□□ -1.27
Cnot1-201ENSMUST00000068452 Ehmt2Q9Z148 1263 aaKnown RBP7.13□□□□□ -1.27
Cnot1-201ENSMUST00000068452 Cecr2E9Q2Z1 1453 aa7.11□□□□□ -1.27
Cnot1-201ENSMUST00000068452 Wdr62Q3U3T8 1523 aa7.1□□□□□ -1.27
Cnot1-201ENSMUST00000068452 Cc2d2aQ8CFW7 1633 aa7.08□□□□□ -1.28
Cnot1-201ENSMUST00000068452 Fmn1Q05860 1466 aa7.07□□□□□ -1.28
Cnot1-201ENSMUST00000068452 Fam135aQ6NS59 1506 aa7.07□□□□□ -1.28
Cnot1-201ENSMUST00000068452 Synj1Q8CHC4 1574 aa7.07□□□□□ -1.28
Cnot1-201ENSMUST00000068452 Frmpd1A2AKB4 1549 aa7.06□□□□□ -1.28
Cnot1-201ENSMUST00000068452 Thoc2B1AZI6 1594 aaKnown RBP7.04□□□□□ -1.28
Cnot1-201ENSMUST00000068452 Pcgf6Q99NA9 353 aa7.02□□□□□ -1.29
Cnot1-201ENSMUST00000068452 Pabpn1Q8CCS6 302 aaKnown RBP7□□□□□ -1.29
Cnot1-201ENSMUST00000068452 LrpprcQ6PB66 1392 aaKnown RBP6.99□□□□□ -1.29
Cnot1-201ENSMUST00000068452 Dhx29Q6PGC1 1365 aaKnown RBP6.98□□□□□ -1.29
Cnot1-201ENSMUST00000068452 Anp32bQ9EST5 272 aaKnown RBP6.96□□□□□ -1.29
Cnot1-201ENSMUST00000068452 Ift140E9PY46 1464 aa6.95□□□□□ -1.3
Cnot1-201ENSMUST00000068452 Cdk11bP24788 784 aaKnown RBP6.95□□□□□ -1.3
Cnot1-201ENSMUST00000068452 Ifnlr1Q8CGK5 535 aa6.92□□□□□ -1.3
Cnot1-201ENSMUST00000068452 Dnajc5bQ9CQ94 199 aa6.92□□□□□ -1.3
Cnot1-201ENSMUST00000068452 Hdac5Q9Z2V6 1113 aa6.92□□□□□ -1.3
Cnot1-201ENSMUST00000068452 Urb2E9Q7L1 1524 aaKnown RBP6.91□□□□□ -1.3
Cnot1-201ENSMUST00000068452 Arhgap27A2AB59 869 aa6.91□□□□□ -1.3
Cnot1-201ENSMUST00000068452 Lamc3Q9R0B6 1581 aa6.9□□□□□ -1.31
Cnot1-201ENSMUST00000068452 NclP09405 707 aaKnown RBP6.89□□□□□ -1.31
Cnot1-201ENSMUST00000068452 AknaQ80VW7 1404 aa6.89□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Cc2d2bA0A286YDU8 1405 aa6.88□□□□□ -1.31
Cnot1-201ENSMUST00000068452 NeflP08551 543 aa6.88□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Ap3b1Q9Z1T1 1105 aa6.88□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Efcab5A0JP43 1406 aa6.88□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Clip1Q922J3 1391 aa6.88□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Ppp1r18Q8BQ30 594 aa6.87□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Fkbp15Q6P9Q6 1216 aaKnown RBP6.87□□□□□ -1.31
Cnot1-201ENSMUST00000068452 PogzQ8BZH4 1409 aaKnown RBP6.86□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Rpap1Q80TE0 1409 aa6.86□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Gm13697A2AK42 830 aa6.86□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Acin1Q9JIX8 1338 aaKnown RBP6.86□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Carmil1Q6EDY6 1374 aa6.86□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Rtl5Q5DTT4 599 aa6.85□□□□□ -1.31
Cnot1-201ENSMUST00000068452 NefmP08553 848 aa6.85□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Fgd6Q69ZL1 1399 aa6.85□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Bcl11aQ9QYE3 773 aa6.85□□□□□ -1.31
Cnot1-201ENSMUST00000068452 Chic1Q8CBW7 227 aa6.84□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms