RNA–Protein interactions for RNA: ENSMUST00000068293.3

Smco3-201, Transcript of Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smco3, Length 2,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3-201ENSMUST00000068293 Mapk8ip2Q9ERE9 830 aa13.76□□□□□ -0.21
Smco3-201ENSMUST00000068293 Chic1Q8CBW7 227 aa13.7□□□□□ -0.22
Smco3-201ENSMUST00000068293 Rpgrip1Q9EPQ2 1331 aa13.67□□□□□ -0.22
Smco3-201ENSMUST00000068293 Rtl1Q7M732 1744 aa13.21□□□□□ -0.29
Smco3-201ENSMUST00000068293 Acin1Q9JIX8 1338 aaKnown RBP13.15□□□□□ -0.3
Smco3-201ENSMUST00000068293 NischQ80TM9 1593 aa13.12□□□□□ -0.31
Smco3-201ENSMUST00000068293 Ccdc180J3QNE4 1664 aa13.11□□□□□ -0.31
Smco3-201ENSMUST00000068293 Pcgf6Q99NA9 353 aa13.01□□□□□ -0.33
Smco3-201ENSMUST00000068293 Abcc9P70170 1546 aa12.8□□□□□ -0.36
Smco3-201ENSMUST00000068293 Rhox8Q6VSS7 320 aa12.71□□□□□ -0.38
Smco3-201ENSMUST00000068293 Dcaf1Q80TR8 1506 aa12.66□□□□□ -0.38
Smco3-201ENSMUST00000068293 Trim41Q5NCC3 630 aa12.66□□□□□ -0.38
Smco3-201ENSMUST00000068293 Gm35339A0A140LHH9 1649 aa12.64□□□□□ -0.39
Smco3-201ENSMUST00000068293 Zcchc6Q5BLK4 1491 aaKnown RBP12.6□□□□□ -0.39
Smco3-201ENSMUST00000068293 Neurod1Q60867 357 aa12.58□□□□□ -0.39
Smco3-201ENSMUST00000068293 Ehmt2Q9Z148 1263 aaKnown RBP12.57□□□□□ -0.4
Smco3-201ENSMUST00000068293 Supt5hO55201 1082 aaKnown RBP12.55□□□□□ -0.4
Smco3-201ENSMUST00000068293 Las1lA2BE28 776 aaKnown RBP12.5□□□□□ -0.41
Smco3-201ENSMUST00000068293 HrcG5E8J6 738 aa12.42□□□□□ -0.42
Smco3-201ENSMUST00000068293 Myt1Q8CFC2 1127 aa12.39□□□□□ -0.43
Smco3-201ENSMUST00000068293 1700123L14RikQ3V2K7 440 aa12.35□□□□□ -0.43
Smco3-201ENSMUST00000068293 Abcc8B2RUS7 1588 aa12.31□□□□□ -0.44
Smco3-201ENSMUST00000068293 CenpbP27790 599 aa12.28□□□□□ -0.44
Smco3-201ENSMUST00000068293 Anks4bQ8K3X6 423 aa12.22□□□□□ -0.45
Smco3-201ENSMUST00000068293 Csrnp3P59055 597 aa12.16□□□□□ -0.46
Smco3-201ENSMUST00000068293 Phf23Q8BSN5 401 aa12.15□□□□□ -0.46
Smco3-201ENSMUST00000068293 Aplp2Q06335 707 aa12.09□□□□□ -0.47
Smco3-201ENSMUST00000068293 DiexfQ8BTT6 772 aaKnown RBP12.09□□□□□ -0.47
Smco3-201ENSMUST00000068293 Sall2Q9QX96 1004 aa12.04□□□□□ -0.48
Smco3-201ENSMUST00000068293 Cngb1E1AZ71 1325 aa12.01□□□□□ -0.49
Smco3-201ENSMUST00000068293 Zeb1Q64318 1117 aa11.99□□□□□ -0.49
Smco3-201ENSMUST00000068293 NefmP08553 848 aa11.96□□□□□ -0.49
Smco3-201ENSMUST00000068293 Bcl11aQ9QYE3 773 aa11.95□□□□□ -0.5
Smco3-201ENSMUST00000068293 Cep164Q5DU05 1446 aa11.82□□□□□ -0.52
Smco3-201ENSMUST00000068293 Cdk11bP24788 784 aaKnown RBP11.79□□□□□ -0.52
Smco3-201ENSMUST00000068293 Mier1Q5UAK0 511 aa11.78□□□□□ -0.52
Smco3-201ENSMUST00000068293 Ccdc136Q3TVA9 1136 aa11.74□□□□□ -0.53
Smco3-201ENSMUST00000068293 Nop58Q6DFW4 536 aaKnown RBP11.74□□□□□ -0.53
Smco3-201ENSMUST00000068293 Gm38655A0A286YDK6 273 aa11.71□□□□□ -0.54
Smco3-201ENSMUST00000068293 Aebp2Q9Z248 504 aaKnown RBP11.67□□□□□ -0.54
Smco3-201ENSMUST00000068293 ClspnQ80YR7 1315 aa11.65□□□□□ -0.54
Smco3-201ENSMUST00000068293 Fam71e1A1L3C1 212 aa11.64□□□□□ -0.55
Smco3-201ENSMUST00000068293 PrkcshO08795 521 aa11.63□□□□□ -0.55
Smco3-201ENSMUST00000068293 Gab3Q8BSM5 595 aa11.59□□□□□ -0.55
Smco3-201ENSMUST00000068293 Wdr66E9Q743 1299 aa11.58□□□□□ -0.56
Smco3-201ENSMUST00000068293 Rb1cc1Q9ESK9 1588 aa11.54□□□□□ -0.56
Smco3-201ENSMUST00000068293 Ifnlr1Q8CGK5 535 aa11.52□□□□□ -0.57
Smco3-201ENSMUST00000068293 SafbD3YXK2 937 aaKnown RBP11.45□□□□□ -0.58
Smco3-201ENSMUST00000068293 Hnrnpul2Q00PI9 745 aaKnown RBP11.44□□□□□ -0.58
Smco3-201ENSMUST00000068293 Plppr3Q7TPB0 716 aa11.44□□□□□ -0.58
Smco3-201ENSMUST00000068293 Baz1aO88379 1555 aa11.44□□□□□ -0.58
Smco3-201ENSMUST00000068293 Tnnt3Q9QZ47 272 aa11.43□□□□□ -0.58
Smco3-201ENSMUST00000068293 Rsf1E9PWW9 1441 aaKnown RBP11.42□□□□□ -0.58
Smco3-201ENSMUST00000068293 Ppargc1bQ8VHJ7 1014 aa11.4□□□□□ -0.58
Smco3-201ENSMUST00000068293 Rtl5Q5DTT4 599 aa11.37□□□□□ -0.59
Smco3-201ENSMUST00000068293 Amer1Q7TS75 1132 aa11.37□□□□□ -0.59
Smco3-201ENSMUST00000068293 Anp32aO35381 247 aa11.34□□□□□ -0.59
Smco3-201ENSMUST00000068293 TonslQ6NZL6 1363 aa11.31□□□□□ -0.6
Smco3-201ENSMUST00000068293 Smarca2Q6DIC0 1577 aa11.26□□□□□ -0.61
Smco3-201ENSMUST00000068293 UbtfP25976 765 aaKnown RBP11.25□□□□□ -0.61
Smco3-201ENSMUST00000068293 Ccdc88bQ4QRL3 1481 aa11.25□□□□□ -0.61
Smco3-201ENSMUST00000068293 Hdac5Q9Z2V6 1113 aa11.23□□□□□ -0.61
Smco3-201ENSMUST00000068293 Nolc1E9Q5C9 702 aaKnown RBP11.21□□□□□ -0.62
Smco3-201ENSMUST00000068293 Znf710Q3U288 666 aa11.2□□□□□ -0.62
Smco3-201ENSMUST00000068293 Ap3b1Q9Z1T1 1105 aa11.17□□□□□ -0.62
Smco3-201ENSMUST00000068293 ScribQ80U72 1612 aa11.17□□□□□ -0.62
Smco3-201ENSMUST00000068293 Pelp1Q9DBD5 1123 aaKnown RBP11.16□□□□□ -0.62
Smco3-201ENSMUST00000068293 Fgd1P52734 960 aa11.13□□□□□ -0.63
Smco3-201ENSMUST00000068293 Supt16hQ920B9 1047 aa11.13□□□□□ -0.63
Smco3-201ENSMUST00000068293 Crybg2B7ZCC2 1516 aa11.13□□□□□ -0.63
Smco3-201ENSMUST00000068293 Golga3P55937 1487 aa11.1□□□□□ -0.63
Smco3-201ENSMUST00000068293 Calr4Q3TQS0 420 aa11.07□□□□□ -0.64
Smco3-201ENSMUST00000068293 Kdm5dQ62240 1548 aa11.07□□□□□ -0.64
Smco3-201ENSMUST00000068293 Ncapd3Q6ZQK0 1506 aa11.07□□□□□ -0.64
Smco3-201ENSMUST00000068293 Rpap1Q80TE0 1409 aa11.06□□□□□ -0.64
Smco3-201ENSMUST00000068293 Upf2A2AT37 1269 aaKnown RBP11.05□□□□□ -0.64
Smco3-201ENSMUST00000068293 Stra8P70278 393 aa11.04□□□□□ -0.64
Smco3-201ENSMUST00000068293 NrdcQ8BHG1 1161 aa11.04□□□□□ -0.64
Smco3-201ENSMUST00000068293 Gtf3c3Q3TMP1 882 aa11.04□□□□□ -0.64
Smco3-201ENSMUST00000068293 NacadQ5SWP3 1504 aa11.02□□□□□ -0.64
Smco3-201ENSMUST00000068293 Rapgef2Q8CHG7 1496 aa11.02□□□□□ -0.65
Smco3-201ENSMUST00000068293 Senp3Q9EP97 568 aaKnown RBP11.01□□□□□ -0.65
Smco3-201ENSMUST00000068293 Washc2Q6PGL7 1334 aa11□□□□□ -0.65
Smco3-201ENSMUST00000068293 Ccdc9Q8VC31 543 aaKnown RBP10.99□□□□□ -0.65
Smco3-201ENSMUST00000068293 Ccdc27Q3V036 639 aa10.98□□□□□ -0.65
Smco3-201ENSMUST00000068293 Pknox2Q8BG99 474 aa10.98□□□□□ -0.65
Smco3-201ENSMUST00000068293 Il27Q8K3I6 234 aa10.98□□□□□ -0.65
Smco3-201ENSMUST00000068293 Brd4Q9ESU6 1400 aaKnown RBP10.98□□□□□ -0.65
Smco3-201ENSMUST00000068293 Kdm5bQ80Y84 1544 aa10.97□□□□□ -0.65
Smco3-201ENSMUST00000068293 Plcd4Q8K3R3 807 aa10.96□□□□□ -0.65
Smco3-201ENSMUST00000068293 Ube2uB1AUC4 352 aa10.93□□□□□ -0.66
Smco3-201ENSMUST00000068293 Liat1Q810M6 228 aa10.93□□□□□ -0.66
Smco3-201ENSMUST00000068293 Irx3P81067 507 aa10.93□□□□□ -0.66
Smco3-201ENSMUST00000068293 Ppp4r2Q0VGB7 417 aa10.93□□□□□ -0.66
Smco3-201ENSMUST00000068293 Egfem1Q8C088 590 aa10.93□□□□□ -0.66
Smco3-201ENSMUST00000068293 Top2bQ64511 1612 aa10.92□□□□□ -0.66
Smco3-201ENSMUST00000068293 Pak3Q61036 559 aa10.92□□□□□ -0.66
Smco3-201ENSMUST00000068293 Wdr43Q6ZQL4 677 aaKnown RBP10.92□□□□□ -0.66
Smco3-201ENSMUST00000068293 Cep162Q6ZQ06 1403 aa10.89□□□□□ -0.67
Smco3-201ENSMUST00000068293 Ttbk1Q6PCN3 1308 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 113.9 ms