RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Rhox8Q6VSS7 320 aa19.07■□□□□ 0.64
Rtn3-202ENSMUST00000065304 Cngb1E1AZ71 1325 aa18.59■□□□□ 0.57
Rtn3-202ENSMUST00000065304 Rpgrip1Q9EPQ2 1331 aa18.46■□□□□ 0.55
Rtn3-202ENSMUST00000065304 Las1lA2BE28 776 aaKnown RBP18.34■□□□□ 0.53
Rtn3-202ENSMUST00000065304 Pelp1Q9DBD5 1123 aaKnown RBP18.34■□□□□ 0.53
Rtn3-202ENSMUST00000065304 Amer1Q7TS75 1132 aa17.6■□□□□ 0.41
Rtn3-202ENSMUST00000065304 Wdr66E9Q743 1299 aa17.54■□□□□ 0.4
Rtn3-202ENSMUST00000065304 4930567H17RikQ3V0K5 233 aa17.45■□□□□ 0.38
Rtn3-202ENSMUST00000065304 CenpbP27790 599 aa17.29■□□□□ 0.36
Rtn3-202ENSMUST00000065304 Ube2uB1AUC4 352 aa17.21■□□□□ 0.35
Rtn3-202ENSMUST00000065304 Ehmt2Q9Z148 1263 aaKnown RBP17.18■□□□□ 0.34
Rtn3-202ENSMUST00000065304 Zeb1Q64318 1117 aa17.01■□□□□ 0.31
Rtn3-202ENSMUST00000065304 Stra8P70278 393 aa16.98■□□□□ 0.31
Rtn3-202ENSMUST00000065304 Myt1Q8CFC2 1127 aa16.92■□□□□ 0.3
Rtn3-202ENSMUST00000065304 Esf1Q3V1V3 845 aaKnown RBP16.71■□□□□ 0.26
Rtn3-202ENSMUST00000065304 4933416C03RikQ3V063 378 aa16.67■□□□□ 0.26
Rtn3-202ENSMUST00000065304 Npm2Q80W85 207 aa16.57■□□□□ 0.24
Rtn3-202ENSMUST00000065304 NefmP08553 848 aa16.57■□□□□ 0.24
Rtn3-202ENSMUST00000065304 Ttbk1Q6PCN3 1308 aa16.52■□□□□ 0.24
Rtn3-202ENSMUST00000065304 Gab3Q8BSM5 595 aa16.48■□□□□ 0.23
Rtn3-202ENSMUST00000065304 Ccdc136Q3TVA9 1136 aa16.43■□□□□ 0.22
Rtn3-202ENSMUST00000065304 Slc24a1Q91WD8 1130 aa16.42■□□□□ 0.22
Rtn3-202ENSMUST00000065304 Tnnt3Q9QZ47 272 aa16.39■□□□□ 0.21
Rtn3-202ENSMUST00000065304 Trim41Q5NCC3 630 aa16.38■□□□□ 0.21
Rtn3-202ENSMUST00000065304 Anp32bQ9EST5 272 aaKnown RBP16.38■□□□□ 0.21
Rtn3-202ENSMUST00000065304 NeflP08551 543 aa16.35■□□□□ 0.21
Rtn3-202ENSMUST00000065304 Myt1lP97500 1187 aa16.34■□□□□ 0.21
Rtn3-202ENSMUST00000065304 Rtl5Q5DTT4 599 aa16.33■□□□□ 0.2
Rtn3-202ENSMUST00000065304 Cdk11bP24788 784 aaKnown RBP16.31■□□□□ 0.2
Rtn3-202ENSMUST00000065304 Acin1Q9JIX8 1338 aaKnown RBP16.29■□□□□ 0.2
Rtn3-202ENSMUST00000065304 NrdcQ8BHG1 1161 aa16.26■□□□□ 0.19
Rtn3-202ENSMUST00000065304 UbtfP25976 765 aaKnown RBP16.08■□□□□ 0.16
Rtn3-202ENSMUST00000065304 HrcG5E8J6 738 aa16.05■□□□□ 0.16
Rtn3-202ENSMUST00000065304 Nop58Q6DFW4 536 aaKnown RBP15.99■□□□□ 0.15
Rtn3-202ENSMUST00000065304 DiexfQ8BTT6 772 aaKnown RBP15.98■□□□□ 0.15
Rtn3-202ENSMUST00000065304 Eif5bQ05D44 1216 aaKnown RBP15.89■□□□□ 0.13
Rtn3-202ENSMUST00000065304 Ythdc1E9Q5K9 736 aaKnown RBP15.84■□□□□ 0.13
Rtn3-202ENSMUST00000065304 NclP09405 707 aaKnown RBP15.82■□□□□ 0.12
Rtn3-202ENSMUST00000065304 DaxxO35613 739 aa15.82■□□□□ 0.12
Rtn3-202ENSMUST00000065304 Os9Q8K2C7 672 aa15.8■□□□□ 0.12
Rtn3-202ENSMUST00000065304 Pcgf6Q99NA9 353 aa15.79■□□□□ 0.12
Rtn3-202ENSMUST00000065304 CatipB9EKE5 520 aa15.72■□□□□ 0.11
Rtn3-202ENSMUST00000065304 Neurod1Q60867 357 aa15.7■□□□□ 0.1
Rtn3-202ENSMUST00000065304 Anp32aO35381 247 aa15.68■□□□□ 0.1
Rtn3-202ENSMUST00000065304 Fam50aQ9WV03 339 aaKnown RBP15.64■□□□□ 0.09
Rtn3-202ENSMUST00000065304 Upf2A2AT37 1269 aaKnown RBP15.52■□□□□ 0.07
Rtn3-202ENSMUST00000065304 TonslQ6NZL6 1363 aa15.5■□□□□ 0.07
Rtn3-202ENSMUST00000065304 Ccdc9Q8VC31 543 aaKnown RBP15.43■□□□□ 0.06
Rtn3-202ENSMUST00000065304 Il27Q8K3I6 234 aa15.37■□□□□ 0.05
Rtn3-202ENSMUST00000065304 Hsp90aa1P07901 733 aaKnown RBP15.34■□□□□ 0.05
Rtn3-202ENSMUST00000065304 Supt5hO55201 1082 aaKnown RBP15.33■□□□□ 0.04
Rtn3-202ENSMUST00000065304 Ppargc1bQ8VHJ7 1014 aa15.31■□□□□ 0.04
Rtn3-202ENSMUST00000065304 Lmod3E9QA62 571 aa15.31■□□□□ 0.04
Rtn3-202ENSMUST00000065304 Nlrp6Q91WS2 869 aa15.27■□□□□ 0.03
Rtn3-202ENSMUST00000065304 ClspnQ80YR7 1315 aa15.24■□□□□ 0.03
Rtn3-202ENSMUST00000065304 Ap3b1Q9Z1T1 1105 aa15.24■□□□□ 0.03
Rtn3-202ENSMUST00000065304 Hdac5Q9Z2V6 1113 aa15.21■□□□□ 0.03
Rtn3-202ENSMUST00000065304 Trim44Q9QXA7 346 aa15.19■□□□□ 0.02
Rtn3-202ENSMUST00000065304 Polr3glQ8R0C0 218 aa15.17■□□□□ 0.02
Rtn3-202ENSMUST00000065304 ArxO35085 564 aa15.17■□□□□ 0.02
Rtn3-202ENSMUST00000065304 Gm13697A2AK42 830 aa15.16■□□□□ 0.02
Rtn3-202ENSMUST00000065304 Aplp2Q06335 707 aa15.1■□□□□ 0.01
Rtn3-202ENSMUST00000065304 Hnrnpul2Q00PI9 745 aaKnown RBP15.07■□□□□ 0
Rtn3-202ENSMUST00000065304 Ccdc180J3QNE4 1664 aa15.04■□□□□ -0
Rtn3-202ENSMUST00000065304 DekQ7TNV0 380 aaKnown RBP15.04■□□□□ -0
Rtn3-202ENSMUST00000065304 Chic1Q8CBW7 227 aa15.04■□□□□ -0
Rtn3-202ENSMUST00000065304 Anks4bQ8K3X6 423 aa15.01□□□□□ -0.01
Rtn3-202ENSMUST00000065304 Mier1Q5UAK0 511 aa15□□□□□ -0.01
Rtn3-202ENSMUST00000065304 Atp1b4Q99ME6 356 aa14.98□□□□□ -0.01
Rtn3-202ENSMUST00000065304 Calr4Q3TQS0 420 aa14.97□□□□□ -0.01
Rtn3-202ENSMUST00000065304 Zbtb7cQ8VCZ7 619 aa14.96□□□□□ -0.01
Rtn3-202ENSMUST00000065304 Ppp4r2Q0VGB7 417 aa14.96□□□□□ -0.01
Rtn3-202ENSMUST00000065304 Adam1bQ8R534 806 aa14.94□□□□□ -0.02
Rtn3-202ENSMUST00000065304 Wdr43Q6ZQL4 677 aaKnown RBP14.93□□□□□ -0.02
Rtn3-202ENSMUST00000065304 Gm13695A2AK44 830 aa14.91□□□□□ -0.02
Rtn3-202ENSMUST00000065304 Csrnp3P59055 597 aa14.91□□□□□ -0.02
Rtn3-202ENSMUST00000065304 PtmaP26350 111 aa14.88□□□□□ -0.03
Rtn3-202ENSMUST00000065304 Erich6D3Z6S9 713 aa14.88□□□□□ -0.03
Rtn3-202ENSMUST00000065304 Zbtb4Q5F293 982 aa14.87□□□□□ -0.03
Rtn3-202ENSMUST00000065304 Htatsf1Q8BGC0 757 aa14.87□□□□□ -0.03
Rtn3-202ENSMUST00000065304 Znf326O88291 580 aa14.87□□□□□ -0.03
Rtn3-202ENSMUST00000065304 Vsig10D3YX43 558 aa14.86□□□□□ -0.03
Rtn3-202ENSMUST00000065304 Fgd1P52734 960 aa14.85□□□□□ -0.03
Rtn3-202ENSMUST00000065304 Prdm10Q3UTQ7 1184 aa14.85□□□□□ -0.03
Rtn3-202ENSMUST00000065304 Ccer2J3QPU5 274 aa14.85□□□□□ -0.03
Rtn3-202ENSMUST00000065304 CanxP35564 591 aaKnown RBP14.83□□□□□ -0.04
Rtn3-202ENSMUST00000065304 Lmod2Q3UHZ5 550 aa14.81□□□□□ -0.04
Rtn3-202ENSMUST00000065304 Tnnt2P50752 301 aa14.79□□□□□ -0.04
Rtn3-202ENSMUST00000065304 PnnO35691 725 aaKnown RBP14.79□□□□□ -0.04
Rtn3-202ENSMUST00000065304 Hsp90ab1P11499 724 aaKnown RBP14.79□□□□□ -0.04
Rtn3-202ENSMUST00000065304 Gm38655A0A286YDK6 273 aa14.78□□□□□ -0.04
Rtn3-202ENSMUST00000065304 Calcoco2A2A6M5 331 aa14.75□□□□□ -0.05
Rtn3-202ENSMUST00000065304 Ccdc27Q3V036 639 aa14.73□□□□□ -0.05
Rtn3-202ENSMUST00000065304 Trim30dE9PWL0 497 aa14.72□□□□□ -0.05
Rtn3-202ENSMUST00000065304 Plcb2A3KGF7 1181 aa14.7□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Rangap1P46061 589 aaKnown RBP14.7□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Casc1Q6TDU8 730 aa14.7□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Mapk8ip2Q9ERE9 830 aa14.69□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Rad21Q61550 635 aaKnown RBP14.69□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Mrs2Q5NCE8 434 aa14.67□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 138 ms