RNA–Protein interactions for RNA: ENSMUST00000062264.7

Nucks1-201, Transcript of Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Nucks1, Length 5,998 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1-201ENSMUST00000062264 Rpgrip1Q9EPQ2 1331 aa18.18■□□□□ 0.5
Nucks1-201ENSMUST00000062264 Rhox8Q6VSS7 320 aa18.09■□□□□ 0.49
Nucks1-201ENSMUST00000062264 NischQ80TM9 1593 aa18.02■□□□□ 0.48
Nucks1-201ENSMUST00000062264 Acin1Q9JIX8 1338 aaKnown RBP17.58■□□□□ 0.4
Nucks1-201ENSMUST00000062264 Rtl1Q7M732 1744 aa17.52■□□□□ 0.39
Nucks1-201ENSMUST00000062264 Ehmt2Q9Z148 1263 aaKnown RBP17.51■□□□□ 0.39
Nucks1-201ENSMUST00000062264 Ccdc180J3QNE4 1664 aa17.5■□□□□ 0.39
Nucks1-201ENSMUST00000062264 Abcc9P70170 1546 aa17.38■□□□□ 0.37
Nucks1-201ENSMUST00000062264 Pcgf6Q99NA9 353 aa17.34■□□□□ 0.37
Nucks1-201ENSMUST00000062264 Gm35339A0A140LHH9 1649 aa16.94■□□□□ 0.3
Nucks1-201ENSMUST00000062264 Supt5hO55201 1082 aaKnown RBP16.87■□□□□ 0.29
Nucks1-201ENSMUST00000062264 Abcc8B2RUS7 1588 aa16.82■□□□□ 0.28
Nucks1-201ENSMUST00000062264 HrcG5E8J6 738 aa16.81■□□□□ 0.28
Nucks1-201ENSMUST00000062264 Dcaf1Q80TR8 1506 aa16.79■□□□□ 0.28
Nucks1-201ENSMUST00000062264 Zcchc6Q5BLK4 1491 aaKnown RBP16.73■□□□□ 0.27
Nucks1-201ENSMUST00000062264 Las1lA2BE28 776 aaKnown RBP16.73■□□□□ 0.27
Nucks1-201ENSMUST00000062264 Neurod1Q60867 357 aa16.72■□□□□ 0.27
Nucks1-201ENSMUST00000062264 Ccdc136Q3TVA9 1136 aa16.64■□□□□ 0.25
Nucks1-201ENSMUST00000062264 Trim41Q5NCC3 630 aa16.62■□□□□ 0.25
Nucks1-201ENSMUST00000062264 Zeb1Q64318 1117 aa16.58■□□□□ 0.25
Nucks1-201ENSMUST00000062264 Cngb1E1AZ71 1325 aa16.39■□□□□ 0.21
Nucks1-201ENSMUST00000062264 1700123L14RikQ3V2K7 440 aa16.28■□□□□ 0.2
Nucks1-201ENSMUST00000062264 NefmP08553 848 aa16.26■□□□□ 0.19
Nucks1-201ENSMUST00000062264 Csrnp3P59055 597 aa16.23■□□□□ 0.19
Nucks1-201ENSMUST00000062264 Sall2Q9QX96 1004 aa16.22■□□□□ 0.19
Nucks1-201ENSMUST00000062264 CenpbP27790 599 aa16.21■□□□□ 0.19
Nucks1-201ENSMUST00000062264 Anks4bQ8K3X6 423 aa16.19■□□□□ 0.18
Nucks1-201ENSMUST00000062264 Myt1Q8CFC2 1127 aa16.13■□□□□ 0.17
Nucks1-201ENSMUST00000062264 Wdr66E9Q743 1299 aa16.13■□□□□ 0.17
Nucks1-201ENSMUST00000062264 Gab3Q8BSM5 595 aa16.1■□□□□ 0.17
Nucks1-201ENSMUST00000062264 Mier1Q5UAK0 511 aa16.08■□□□□ 0.17
Nucks1-201ENSMUST00000062264 Cep164Q5DU05 1446 aa16.02■□□□□ 0.15
Nucks1-201ENSMUST00000062264 Cdk11bP24788 784 aaKnown RBP16■□□□□ 0.15
Nucks1-201ENSMUST00000062264 Aplp2Q06335 707 aa15.95■□□□□ 0.14
Nucks1-201ENSMUST00000062264 Nop58Q6DFW4 536 aaKnown RBP15.94■□□□□ 0.14
Nucks1-201ENSMUST00000062264 Gm38655A0A286YDK6 273 aa15.89■□□□□ 0.13
Nucks1-201ENSMUST00000062264 Ppargc1bQ8VHJ7 1014 aa15.87■□□□□ 0.13
Nucks1-201ENSMUST00000062264 Rb1cc1Q9ESK9 1588 aa15.84■□□□□ 0.13
Nucks1-201ENSMUST00000062264 DiexfQ8BTT6 772 aaKnown RBP15.81■□□□□ 0.12
Nucks1-201ENSMUST00000062264 Aebp2Q9Z248 504 aaKnown RBP15.79■□□□□ 0.12
Nucks1-201ENSMUST00000062264 UbtfP25976 765 aaKnown RBP15.76■□□□□ 0.11
Nucks1-201ENSMUST00000062264 Chic1Q8CBW7 227 aa15.75■□□□□ 0.11
Nucks1-201ENSMUST00000062264 ClspnQ80YR7 1315 aa15.75■□□□□ 0.11
Nucks1-201ENSMUST00000062264 Baz1aO88379 1555 aa15.61■□□□□ 0.09
Nucks1-201ENSMUST00000062264 Rsf1E9PWW9 1441 aaKnown RBP15.59■□□□□ 0.09
Nucks1-201ENSMUST00000062264 Bcl11aQ9QYE3 773 aa15.56■□□□□ 0.08
Nucks1-201ENSMUST00000062264 TonslQ6NZL6 1363 aa15.52■□□□□ 0.08
Nucks1-201ENSMUST00000062264 Fam71e1A1L3C1 212 aa15.52■□□□□ 0.08
Nucks1-201ENSMUST00000062264 Mapk8ip2Q9ERE9 830 aa15.48■□□□□ 0.07
Nucks1-201ENSMUST00000062264 Tnnt3Q9QZ47 272 aa15.43■□□□□ 0.06
Nucks1-201ENSMUST00000062264 SafbD3YXK2 937 aaKnown RBP15.41■□□□□ 0.06
Nucks1-201ENSMUST00000062264 Ccdc88bQ4QRL3 1481 aa15.38■□□□□ 0.05
Nucks1-201ENSMUST00000062264 Hnrnpul2Q00PI9 745 aaKnown RBP15.37■□□□□ 0.05
Nucks1-201ENSMUST00000062264 Esf1Q3V1V3 845 aaKnown RBP15.37■□□□□ 0.05
Nucks1-201ENSMUST00000062264 Myt1lP97500 1187 aa15.37■□□□□ 0.05
Nucks1-201ENSMUST00000062264 Ap3b1Q9Z1T1 1105 aa15.31■□□□□ 0.04
Nucks1-201ENSMUST00000062264 Kdm5dQ62240 1548 aa15.28■□□□□ 0.04
Nucks1-201ENSMUST00000062264 ScribQ80U72 1612 aa15.27■□□□□ 0.03
Nucks1-201ENSMUST00000062264 Smarca2Q6DIC0 1577 aa15.25■□□□□ 0.03
Nucks1-201ENSMUST00000062264 Anp32aO35381 247 aa15.25■□□□□ 0.03
Nucks1-201ENSMUST00000062264 Golga3P55937 1487 aa15.22■□□□□ 0.03
Nucks1-201ENSMUST00000062264 Pelp1Q9DBD5 1123 aaKnown RBP15.21■□□□□ 0.03
Nucks1-201ENSMUST00000062264 Brd4Q9ESU6 1400 aaKnown RBP15.2■□□□□ 0.02
Nucks1-201ENSMUST00000062264 Plekhg3Q4VAC9 1341 aa15.16■□□□□ 0.02
Nucks1-201ENSMUST00000062264 PrkcshO08795 521 aa15.15■□□□□ 0.02
Nucks1-201ENSMUST00000062264 Stra8P70278 393 aa15.14■□□□□ 0.01
Nucks1-201ENSMUST00000062264 Ifnlr1Q8CGK5 535 aa15.14■□□□□ 0.01
Nucks1-201ENSMUST00000062264 Npm2Q80W85 207 aa15.14■□□□□ 0.01
Nucks1-201ENSMUST00000062264 Eid3Q3V124 375 aa15.13■□□□□ 0.01
Nucks1-201ENSMUST00000062264 Rtl5Q5DTT4 599 aa15.13■□□□□ 0.01
Nucks1-201ENSMUST00000062264 NacadQ5SWP3 1504 aa15.09■□□□□ 0.01
Nucks1-201ENSMUST00000062264 Crybg2B7ZCC2 1516 aa15.04■□□□□ -0
Nucks1-201ENSMUST00000062264 Calr4Q3TQS0 420 aa15.01□□□□□ -0.01
Nucks1-201ENSMUST00000062264 Ttbk1Q6PCN3 1308 aa15□□□□□ -0.01
Nucks1-201ENSMUST00000062264 Slc24a1Q91WD8 1130 aa15□□□□□ -0.01
Nucks1-201ENSMUST00000062264 Clip1Q922J3 1391 aa15□□□□□ -0.01
Nucks1-201ENSMUST00000062264 NclP09405 707 aaKnown RBP14.97□□□□□ -0.01
Nucks1-201ENSMUST00000062264 Nolc1E9Q5C9 702 aaKnown RBP14.97□□□□□ -0.01
Nucks1-201ENSMUST00000062264 Amer1Q7TS75 1132 aa14.97□□□□□ -0.01
Nucks1-201ENSMUST00000062264 Znf710Q3U288 666 aa14.92□□□□□ -0.02
Nucks1-201ENSMUST00000062264 Cecr2E9Q2Z1 1453 aa14.91□□□□□ -0.02
Nucks1-201ENSMUST00000062264 Rapgef2Q8CHG7 1496 aa14.9□□□□□ -0.02
Nucks1-201ENSMUST00000062264 Cep162Q6ZQ06 1403 aa14.89□□□□□ -0.03
Nucks1-201ENSMUST00000062264 Supt16hQ920B9 1047 aa14.88□□□□□ -0.03
Nucks1-201ENSMUST00000062264 Ppp4r2Q0VGB7 417 aa14.87□□□□□ -0.03
Nucks1-201ENSMUST00000062264 Synj1Q8CHC4 1574 aa14.86□□□□□ -0.03
Nucks1-201ENSMUST00000062264 Eif5bQ05D44 1216 aaKnown RBP14.85□□□□□ -0.03
Nucks1-201ENSMUST00000062264 Ncapd3Q6ZQK0 1506 aa14.82□□□□□ -0.04
Nucks1-201ENSMUST00000062264 Wdr43Q6ZQL4 677 aaKnown RBP14.8□□□□□ -0.04
Nucks1-201ENSMUST00000062264 Fam50aQ9WV03 339 aaKnown RBP14.78□□□□□ -0.04
Nucks1-201ENSMUST00000062264 Rpap1Q80TE0 1409 aa14.75□□□□□ -0.05
Nucks1-201ENSMUST00000062264 CftrP26361 1476 aa14.73□□□□□ -0.05
Nucks1-201ENSMUST00000062264 Hdac5Q9Z2V6 1113 aa14.72□□□□□ -0.05
Nucks1-201ENSMUST00000062264 Sycp2Q9CUU3 1500 aa14.69□□□□□ -0.06
Nucks1-201ENSMUST00000062264 Top2bQ64511 1612 aa14.67□□□□□ -0.06
Nucks1-201ENSMUST00000062264 Cc2d2aQ8CFW7 1633 aa14.66□□□□□ -0.06
Nucks1-201ENSMUST00000062264 Ube2uB1AUC4 352 aa14.65□□□□□ -0.06
Nucks1-201ENSMUST00000062264 Ccdc27Q3V036 639 aa14.64□□□□□ -0.07
Nucks1-201ENSMUST00000062264 Fmn1Q05860 1466 aa14.64□□□□□ -0.07
Nucks1-201ENSMUST00000062264 Upf2A2AT37 1269 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms