RNA–Protein interactions for RNA: ENSMUST00000059407.8

Slitrk3-201, Transcript of SLIT and NTRK-like protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Slitrk3, Length 3,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Slitrk3-201ENSMUST00000059407 NischQ80TM9 1593 aa24.6■■□□□ 1.53
Slitrk3-201ENSMUST00000059407 Gm35339A0A140LHH9 1649 aa24.04■■□□□ 1.44
Slitrk3-201ENSMUST00000059407 Abcc9P70170 1546 aa23.88■■□□□ 1.41
Slitrk3-201ENSMUST00000059407 Abcc8B2RUS7 1588 aa23.33■■□□□ 1.33
Slitrk3-201ENSMUST00000059407 Rhox8Q6VSS7 320 aa22.98■■□□□ 1.27
Slitrk3-201ENSMUST00000059407 Rtl1Q7M732 1744 aa22.5■■□□□ 1.19
Slitrk3-201ENSMUST00000059407 Ccdc180J3QNE4 1664 aa22.2■■□□□ 1.14
Slitrk3-201ENSMUST00000059407 Ehmt2Q9Z148 1263 aaKnown RBP22.07■■□□□ 1.12
Slitrk3-201ENSMUST00000059407 Zcchc6Q5BLK4 1491 aaKnown RBP21.98■■□□□ 1.11
Slitrk3-201ENSMUST00000059407 ScribQ80U72 1612 aa21.8■■□□□ 1.08
Slitrk3-201ENSMUST00000059407 Dcaf1Q80TR8 1506 aa21.59■■□□□ 1.05
Slitrk3-201ENSMUST00000059407 Rb1cc1Q9ESK9 1588 aa21.58■■□□□ 1.04
Slitrk3-201ENSMUST00000059407 Rpgrip1Q9EPQ2 1331 aa21.5■■□□□ 1.03
Slitrk3-201ENSMUST00000059407 Ccdc136Q3TVA9 1136 aa21.41■■□□□ 1.02
Slitrk3-201ENSMUST00000059407 Kdm5dQ62240 1548 aa21.36■■□□□ 1.01
Slitrk3-201ENSMUST00000059407 Baz1aO88379 1555 aa21.27■■□□□ 1
Slitrk3-201ENSMUST00000059407 Acin1Q9JIX8 1338 aaKnown RBP21.2■□□□□ 0.98
Slitrk3-201ENSMUST00000059407 HrcG5E8J6 738 aa21.13■□□□□ 0.97
Slitrk3-201ENSMUST00000059407 NacadQ5SWP3 1504 aa21.02■□□□□ 0.96
Slitrk3-201ENSMUST00000059407 Pcgf6Q99NA9 353 aa21.02■□□□□ 0.96
Slitrk3-201ENSMUST00000059407 Trim41Q5NCC3 630 aa20.86■□□□□ 0.93
Slitrk3-201ENSMUST00000059407 Smarca2Q6DIC0 1577 aa20.85■□□□□ 0.93
Slitrk3-201ENSMUST00000059407 Crybg2B7ZCC2 1516 aa20.7■□□□□ 0.9
Slitrk3-201ENSMUST00000059407 Supt5hO55201 1082 aaKnown RBP20.66■□□□□ 0.9
Slitrk3-201ENSMUST00000059407 Sycp2Q9CUU3 1500 aa20.62■□□□□ 0.89
Slitrk3-201ENSMUST00000059407 Zeb1Q64318 1117 aa20.58■□□□□ 0.88
Slitrk3-201ENSMUST00000059407 Cep164Q5DU05 1446 aa20.56■□□□□ 0.88
Slitrk3-201ENSMUST00000059407 Cecr2E9Q2Z1 1453 aa20.45■□□□□ 0.87
Slitrk3-201ENSMUST00000059407 Chic1Q8CBW7 227 aa20.45■□□□□ 0.86
Slitrk3-201ENSMUST00000059407 Rsf1E9PWW9 1441 aaKnown RBP20.43■□□□□ 0.86
Slitrk3-201ENSMUST00000059407 Cngb1E1AZ71 1325 aa20.37■□□□□ 0.85
Slitrk3-201ENSMUST00000059407 Neurod1Q60867 357 aa20.31■□□□□ 0.84
Slitrk3-201ENSMUST00000059407 Ccdc88bQ4QRL3 1481 aa20.3■□□□□ 0.84
Slitrk3-201ENSMUST00000059407 Gab3Q8BSM5 595 aa20.29■□□□□ 0.84
Slitrk3-201ENSMUST00000059407 BicraF8VPZ9 1578 aa20.28■□□□□ 0.84
Slitrk3-201ENSMUST00000059407 Synj1Q8CHC4 1574 aa20.25■□□□□ 0.83
Slitrk3-201ENSMUST00000059407 Brd4Q9ESU6 1400 aaKnown RBP20.24■□□□□ 0.83
Slitrk3-201ENSMUST00000059407 Golga3P55937 1487 aa20.16■□□□□ 0.82
Slitrk3-201ENSMUST00000059407 Ppargc1bQ8VHJ7 1014 aa20.06■□□□□ 0.8
Slitrk3-201ENSMUST00000059407 CftrP26361 1476 aa20.04■□□□□ 0.8
Slitrk3-201ENSMUST00000059407 Wdr66E9Q743 1299 aa19.97■□□□□ 0.79
Slitrk3-201ENSMUST00000059407 Top2bQ64511 1612 aa19.96■□□□□ 0.79
Slitrk3-201ENSMUST00000059407 Esf1Q3V1V3 845 aaKnown RBP19.93■□□□□ 0.78
Slitrk3-201ENSMUST00000059407 Cc2d2aQ8CFW7 1633 aa19.88■□□□□ 0.77
Slitrk3-201ENSMUST00000059407 Las1lA2BE28 776 aaKnown RBP19.87■□□□□ 0.77
Slitrk3-201ENSMUST00000059407 Sall2Q9QX96 1004 aa19.86■□□□□ 0.77
Slitrk3-201ENSMUST00000059407 Cttnbp2B9EJA2 1648 aa19.86■□□□□ 0.77
Slitrk3-201ENSMUST00000059407 Mier1Q5UAK0 511 aa19.84■□□□□ 0.77
Slitrk3-201ENSMUST00000059407 Gm38655A0A286YDK6 273 aa19.8■□□□□ 0.76
Slitrk3-201ENSMUST00000059407 Csrnp3P59055 597 aa19.8■□□□□ 0.76
Slitrk3-201ENSMUST00000059407 Smarca4Q3TKT4 1613 aaKnown RBP19.74■□□□□ 0.75
Slitrk3-201ENSMUST00000059407 1700123L14RikQ3V2K7 440 aa19.67■□□□□ 0.74
Slitrk3-201ENSMUST00000059407 UbtfP25976 765 aaKnown RBP19.65■□□□□ 0.74
Slitrk3-201ENSMUST00000059407 Rapgef2Q8CHG7 1496 aa19.63■□□□□ 0.73
Slitrk3-201ENSMUST00000059407 NefmP08553 848 aa19.59■□□□□ 0.73
Slitrk3-201ENSMUST00000059407 Top2aQ01320 1528 aaKnown RBP19.58■□□□□ 0.73
Slitrk3-201ENSMUST00000059407 Fmn1Q05860 1466 aa19.55■□□□□ 0.72
Slitrk3-201ENSMUST00000059407 Iqgap2Q3UQ44 1575 aa19.5■□□□□ 0.71
Slitrk3-201ENSMUST00000059407 Cep162Q6ZQ06 1403 aa19.48■□□□□ 0.71
Slitrk3-201ENSMUST00000059407 Myt1lP97500 1187 aa19.47■□□□□ 0.71
Slitrk3-201ENSMUST00000059407 Aebp2Q9Z248 504 aaKnown RBP19.45■□□□□ 0.7
Slitrk3-201ENSMUST00000059407 Cdk11bP24788 784 aaKnown RBP19.41■□□□□ 0.7
Slitrk3-201ENSMUST00000059407 Nop58Q6DFW4 536 aaKnown RBP19.41■□□□□ 0.7
Slitrk3-201ENSMUST00000059407 Anks4bQ8K3X6 423 aa19.37■□□□□ 0.69
Slitrk3-201ENSMUST00000059407 Eif4g1Q6NZJ6 1600 aaKnown RBP19.33■□□□□ 0.69
Slitrk3-201ENSMUST00000059407 Npm2Q80W85 207 aa19.28■□□□□ 0.68
Slitrk3-201ENSMUST00000059407 CenpbP27790 599 aa19.28■□□□□ 0.68
Slitrk3-201ENSMUST00000059407 Atad2bE9Q166 1460 aaKnown RBP19.26■□□□□ 0.67
Slitrk3-201ENSMUST00000059407 Plekhg3Q4VAC9 1341 aa19.26■□□□□ 0.67
Slitrk3-201ENSMUST00000059407 TnnQ80Z71 1560 aa19.23■□□□□ 0.67
Slitrk3-201ENSMUST00000059407 PtprkP35822 1457 aa19.21■□□□□ 0.67
Slitrk3-201ENSMUST00000059407 Clip1Q922J3 1391 aa19.19■□□□□ 0.66
Slitrk3-201ENSMUST00000059407 Arhgap35Q91YM2 1499 aa19.14■□□□□ 0.66
Slitrk3-201ENSMUST00000059407 Frmpd1A2AKB4 1549 aa19.14■□□□□ 0.65
Slitrk3-201ENSMUST00000059407 Mapk8ip2Q9ERE9 830 aa19.12■□□□□ 0.65
Slitrk3-201ENSMUST00000059407 Ncapd3Q6ZQK0 1506 aa19.08■□□□□ 0.65
Slitrk3-201ENSMUST00000059407 Pds5bQ4VA53 1446 aaKnown RBP19.08■□□□□ 0.65
Slitrk3-201ENSMUST00000059407 Wdr62Q3U3T8 1523 aa19.07■□□□□ 0.64
Slitrk3-201ENSMUST00000059407 Il27Q8K3I6 234 aa19.06■□□□□ 0.64
Slitrk3-201ENSMUST00000059407 ClspnQ80YR7 1315 aa19.06■□□□□ 0.64
Slitrk3-201ENSMUST00000059407 Arap1Q4LDD4 1452 aa19.06■□□□□ 0.64
Slitrk3-201ENSMUST00000059407 NrkQ9R0G8 1455 aa19.02■□□□□ 0.64
Slitrk3-201ENSMUST00000059407 Ap3b1Q9Z1T1 1105 aa19.02■□□□□ 0.64
Slitrk3-201ENSMUST00000059407 Unc13aQ4KUS2 1712 aa19.02■□□□□ 0.64
Slitrk3-201ENSMUST00000059407 Lamc3Q9R0B6 1581 aa19.01■□□□□ 0.63
Slitrk3-201ENSMUST00000059407 Aplp2Q06335 707 aa18.99■□□□□ 0.63
Slitrk3-201ENSMUST00000059407 TonslQ6NZL6 1363 aa18.98■□□□□ 0.63
Slitrk3-201ENSMUST00000059407 SafbD3YXK2 937 aaKnown RBP18.97■□□□□ 0.63
Slitrk3-201ENSMUST00000059407 Eid3Q3V124 375 aa18.97■□□□□ 0.63
Slitrk3-201ENSMUST00000059407 Kif15Q6P9L6 1387 aa18.96■□□□□ 0.63
Slitrk3-201ENSMUST00000059407 Camsap1A2AHC3 1581 aa18.93■□□□□ 0.62
Slitrk3-201ENSMUST00000059407 Eea1Q8BL66 1411 aa18.92■□□□□ 0.62
Slitrk3-201ENSMUST00000059407 Shroom4Q1W617 1475 aa18.91■□□□□ 0.62
Slitrk3-201ENSMUST00000059407 Arhgef5E9Q7D5 1581 aa18.91■□□□□ 0.62
Slitrk3-201ENSMUST00000059407 Kdm5bQ80Y84 1544 aa18.9■□□□□ 0.62
Slitrk3-201ENSMUST00000059407 Setd5Q5XJV7 1441 aa18.87■□□□□ 0.61
Slitrk3-201ENSMUST00000059407 AqrQ8CFQ3 1481 aaKnown RBP18.85■□□□□ 0.61
Slitrk3-201ENSMUST00000059407 Fam71e1A1L3C1 212 aa18.84■□□□□ 0.61
Slitrk3-201ENSMUST00000059407 Hnrnpul2Q00PI9 745 aaKnown RBP18.82■□□□□ 0.6
Slitrk3-201ENSMUST00000059407 Slc24a1Q91WD8 1130 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms