RNA–Protein interactions for RNA: ENSMUST00000057254.5

Ubqln3-201, Transcript of Ubiquilin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubqln3, Length 2,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3-201ENSMUST00000057254 NischQ80TM9 1593 aa17.95■□□□□ 0.46
Ubqln3-201ENSMUST00000057254 Gm35339A0A140LHH9 1649 aa17.75■□□□□ 0.43
Ubqln3-201ENSMUST00000057254 Abcc9P70170 1546 aa17.41■□□□□ 0.38
Ubqln3-201ENSMUST00000057254 Abcc8B2RUS7 1588 aa17.11■□□□□ 0.33
Ubqln3-201ENSMUST00000057254 Rhox8Q6VSS7 320 aa16.42■□□□□ 0.22
Ubqln3-201ENSMUST00000057254 ScribQ80U72 1612 aa16.16■□□□□ 0.18
Ubqln3-201ENSMUST00000057254 Rtl1Q7M732 1744 aa15.86■□□□□ 0.13
Ubqln3-201ENSMUST00000057254 Dcaf1Q80TR8 1506 aa15.79■□□□□ 0.12
Ubqln3-201ENSMUST00000057254 Kdm5dQ62240 1548 aa15.76■□□□□ 0.11
Ubqln3-201ENSMUST00000057254 Rb1cc1Q9ESK9 1588 aa15.74■□□□□ 0.11
Ubqln3-201ENSMUST00000057254 NacadQ5SWP3 1504 aa15.58■□□□□ 0.08
Ubqln3-201ENSMUST00000057254 Ccdc180J3QNE4 1664 aa15.53■□□□□ 0.08
Ubqln3-201ENSMUST00000057254 Baz1aO88379 1555 aa15.5■□□□□ 0.07
Ubqln3-201ENSMUST00000057254 Zcchc6Q5BLK4 1491 aaKnown RBP15.48■□□□□ 0.07
Ubqln3-201ENSMUST00000057254 Ccdc136Q3TVA9 1136 aa15.3■□□□□ 0.04
Ubqln3-201ENSMUST00000057254 Sycp2Q9CUU3 1500 aa15.28■□□□□ 0.04
Ubqln3-201ENSMUST00000057254 Smarca2Q6DIC0 1577 aa15.15■□□□□ 0.02
Ubqln3-201ENSMUST00000057254 Crybg2B7ZCC2 1516 aa15.14■□□□□ 0.01
Ubqln3-201ENSMUST00000057254 BicraF8VPZ9 1578 aa15.05■□□□□ -0
Ubqln3-201ENSMUST00000057254 Cecr2E9Q2Z1 1453 aa14.91□□□□□ -0.02
Ubqln3-201ENSMUST00000057254 Trim41Q5NCC3 630 aa14.83□□□□□ -0.04
Ubqln3-201ENSMUST00000057254 HrcG5E8J6 738 aa14.76□□□□□ -0.05
Ubqln3-201ENSMUST00000057254 Synj1Q8CHC4 1574 aa14.73□□□□□ -0.05
Ubqln3-201ENSMUST00000057254 Brd4Q9ESU6 1400 aaKnown RBP14.69□□□□□ -0.06
Ubqln3-201ENSMUST00000057254 Cngb1E1AZ71 1325 aa14.63□□□□□ -0.07
Ubqln3-201ENSMUST00000057254 CftrP26361 1476 aa14.59□□□□□ -0.07
Ubqln3-201ENSMUST00000057254 Smarca4Q3TKT4 1613 aaKnown RBP14.58□□□□□ -0.08
Ubqln3-201ENSMUST00000057254 Cttnbp2B9EJA2 1648 aa14.54□□□□□ -0.08
Ubqln3-201ENSMUST00000057254 Rsf1E9PWW9 1441 aaKnown RBP14.51□□□□□ -0.09
Ubqln3-201ENSMUST00000057254 Golga3P55937 1487 aa14.51□□□□□ -0.09
Ubqln3-201ENSMUST00000057254 Chic1Q8CBW7 227 aa14.51□□□□□ -0.09
Ubqln3-201ENSMUST00000057254 Ehmt2Q9Z148 1263 aaKnown RBP14.5□□□□□ -0.09
Ubqln3-201ENSMUST00000057254 Cep164Q5DU05 1446 aa14.49□□□□□ -0.09
Ubqln3-201ENSMUST00000057254 Esf1Q3V1V3 845 aaKnown RBP14.48□□□□□ -0.09
Ubqln3-201ENSMUST00000057254 Ccdc88bQ4QRL3 1481 aa14.47□□□□□ -0.09
Ubqln3-201ENSMUST00000057254 Iqgap2Q3UQ44 1575 aa14.43□□□□□ -0.1
Ubqln3-201ENSMUST00000057254 Top2bQ64511 1612 aa14.43□□□□□ -0.1
Ubqln3-201ENSMUST00000057254 Cc2d2aQ8CFW7 1633 aa14.39□□□□□ -0.11
Ubqln3-201ENSMUST00000057254 Gab3Q8BSM5 595 aa14.37□□□□□ -0.11
Ubqln3-201ENSMUST00000057254 Atad2bE9Q166 1460 aaKnown RBP14.34□□□□□ -0.11
Ubqln3-201ENSMUST00000057254 Pds5bQ4VA53 1446 aaKnown RBP14.29□□□□□ -0.12
Ubqln3-201ENSMUST00000057254 Frmpd1A2AKB4 1549 aa14.17□□□□□ -0.14
Ubqln3-201ENSMUST00000057254 Wdr62Q3U3T8 1523 aa14.16□□□□□ -0.14
Ubqln3-201ENSMUST00000057254 Fmn1Q05860 1466 aa14.15□□□□□ -0.14
Ubqln3-201ENSMUST00000057254 Unc13aQ4KUS2 1712 aa14.13□□□□□ -0.15
Ubqln3-201ENSMUST00000057254 Acin1Q9JIX8 1338 aaKnown RBP14.11□□□□□ -0.15
Ubqln3-201ENSMUST00000057254 Top2aQ01320 1528 aaKnown RBP14.1□□□□□ -0.15
Ubqln3-201ENSMUST00000057254 Ercc6F8VPZ5 1481 aa14.07□□□□□ -0.16
Ubqln3-201ENSMUST00000057254 TnnQ80Z71 1560 aa14.04□□□□□ -0.16
Ubqln3-201ENSMUST00000057254 Rapgef2Q8CHG7 1496 aa13.99□□□□□ -0.17
Ubqln3-201ENSMUST00000057254 Rpgrip1Q9EPQ2 1331 aa13.98□□□□□ -0.17
Ubqln3-201ENSMUST00000057254 Thoc2B1AZI6 1594 aaKnown RBP13.98□□□□□ -0.17
Ubqln3-201ENSMUST00000057254 Lamc3Q9R0B6 1581 aa13.96□□□□□ -0.17
Ubqln3-201ENSMUST00000057254 Kif15Q6P9L6 1387 aa13.94□□□□□ -0.18
Ubqln3-201ENSMUST00000057254 Il27Q8K3I6 234 aa13.92□□□□□ -0.18
Ubqln3-201ENSMUST00000057254 Myt1lP97500 1187 aa13.89□□□□□ -0.19
Ubqln3-201ENSMUST00000057254 Cep162Q6ZQ06 1403 aa13.89□□□□□ -0.19
Ubqln3-201ENSMUST00000057254 Npm2Q80W85 207 aa13.87□□□□□ -0.19
Ubqln3-201ENSMUST00000057254 Camsap1A2AHC3 1581 aa13.85□□□□□ -0.19
Ubqln3-201ENSMUST00000057254 PtprkP35822 1457 aa13.85□□□□□ -0.19
Ubqln3-201ENSMUST00000057254 Eif4g1Q6NZJ6 1600 aaKnown RBP13.83□□□□□ -0.2
Ubqln3-201ENSMUST00000057254 Phldb1Q6PDH0 1371 aaKnown RBP13.82□□□□□ -0.2
Ubqln3-201ENSMUST00000057254 Ubl4bQ9CQ84 188 aa13.78□□□□□ -0.2
Ubqln3-201ENSMUST00000057254 Fam135aQ6NS59 1506 aa13.77□□□□□ -0.21
Ubqln3-201ENSMUST00000057254 Cux2P70298 1426 aa13.75□□□□□ -0.21
Ubqln3-201ENSMUST00000057254 Arhgap35Q91YM2 1499 aa13.75□□□□□ -0.21
Ubqln3-201ENSMUST00000057254 Ccdc18Q640L5 1455 aa13.73□□□□□ -0.21
Ubqln3-201ENSMUST00000057254 NrkQ9R0G8 1455 aa13.72□□□□□ -0.21
Ubqln3-201ENSMUST00000057254 Grin2bQ01097 1482 aa13.72□□□□□ -0.21
Ubqln3-201ENSMUST00000057254 Shroom4Q1W617 1475 aa13.72□□□□□ -0.21
Ubqln3-201ENSMUST00000057254 Dnajc5bQ9CQ94 199 aa13.7□□□□□ -0.22
Ubqln3-201ENSMUST00000057254 Mier1Q5UAK0 511 aa13.68□□□□□ -0.22
Ubqln3-201ENSMUST00000057254 UbtfP25976 765 aaKnown RBP13.67□□□□□ -0.22
Ubqln3-201ENSMUST00000057254 Clip1Q922J3 1391 aa13.64□□□□□ -0.23
Ubqln3-201ENSMUST00000057254 Npm1Q61937 292 aaKnown RBP13.63□□□□□ -0.23
Ubqln3-201ENSMUST00000057254 Plekhg3Q4VAC9 1341 aa13.62□□□□□ -0.23
Ubqln3-201ENSMUST00000057254 Zeb1Q64318 1117 aa13.61□□□□□ -0.23
Ubqln3-201ENSMUST00000057254 Baz1bQ9Z277 1479 aa13.61□□□□□ -0.23
Ubqln3-201ENSMUST00000057254 Ap3b1Q9Z1T1 1105 aa13.59□□□□□ -0.23
Ubqln3-201ENSMUST00000057254 Mroh2bQ7M6Y6 1581 aa13.58□□□□□ -0.24
Ubqln3-201ENSMUST00000057254 LrpprcQ6PB66 1392 aaKnown RBP13.57□□□□□ -0.24
Ubqln3-201ENSMUST00000057254 Arap1Q4LDD4 1452 aa13.57□□□□□ -0.24
Ubqln3-201ENSMUST00000057254 Map3k1P53349 1493 aa13.55□□□□□ -0.24
Ubqln3-201ENSMUST00000057254 Duox2A2AQ99 1517 aa13.55□□□□□ -0.24
Ubqln3-201ENSMUST00000057254 PogzQ8BZH4 1409 aaKnown RBP13.55□□□□□ -0.24
Ubqln3-201ENSMUST00000057254 Kif21aQ9QXL2 1672 aa13.55□□□□□ -0.24
Ubqln3-201ENSMUST00000057254 Samd9lQ69Z37 1561 aa13.53□□□□□ -0.24
Ubqln3-201ENSMUST00000057254 Eea1Q8BL66 1411 aa13.51□□□□□ -0.25
Ubqln3-201ENSMUST00000057254 Dhx29Q6PGC1 1365 aaKnown RBP13.51□□□□□ -0.25
Ubqln3-201ENSMUST00000057254 Ankrd26Q811D2 1581 aa13.5□□□□□ -0.25
Ubqln3-201ENSMUST00000057254 Setd5Q5XJV7 1441 aa13.5□□□□□ -0.25
Ubqln3-201ENSMUST00000057254 Efcab5A0JP43 1406 aa13.49□□□□□ -0.25
Ubqln3-201ENSMUST00000057254 Mrc2Q64449 1479 aa13.48□□□□□ -0.25
Ubqln3-201ENSMUST00000057254 Arhgef5E9Q7D5 1581 aa13.47□□□□□ -0.25
Ubqln3-201ENSMUST00000057254 Erich3F6QRE9 1637 aa13.46□□□□□ -0.26
Ubqln3-201ENSMUST00000057254 Rad54l2Q99NG0 1466 aa13.46□□□□□ -0.26
Ubqln3-201ENSMUST00000057254 Cux1P53564 1515 aa13.46□□□□□ -0.26
Ubqln3-201ENSMUST00000057254 Crocc2F6XLV1 1638 aa13.45□□□□□ -0.26
Ubqln3-201ENSMUST00000057254 AqrQ8CFQ3 1481 aaKnown RBP13.44□□□□□ -0.26
Ubqln3-201ENSMUST00000057254 Pcf11G3X9Z4 1553 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 125.1 ms