RNA–Protein interactions for RNA: ENSMUST00000057224.3

Ccdc187-201, Transcript of Coiled-coil domain-containing protein 187, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc187, Length 3,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187-201ENSMUST00000057224 NischQ80TM9 1593 aa25.43■■□□□ 1.66
Ccdc187-201ENSMUST00000057224 Gm35339A0A140LHH9 1649 aa25.24■■□□□ 1.63
Ccdc187-201ENSMUST00000057224 Abcc9P70170 1546 aa24.75■■□□□ 1.55
Ccdc187-201ENSMUST00000057224 Abcc8B2RUS7 1588 aa24.23■■□□□ 1.47
Ccdc187-201ENSMUST00000057224 Rhox8Q6VSS7 320 aa23.15■■□□□ 1.3
Ccdc187-201ENSMUST00000057224 Rtl1Q7M732 1744 aa23.03■■□□□ 1.28
Ccdc187-201ENSMUST00000057224 ScribQ80U72 1612 aa22.7■■□□□ 1.22
Ccdc187-201ENSMUST00000057224 Dcaf1Q80TR8 1506 aa22.61■■□□□ 1.21
Ccdc187-201ENSMUST00000057224 Ccdc180J3QNE4 1664 aa22.51■■□□□ 1.19
Ccdc187-201ENSMUST00000057224 Rb1cc1Q9ESK9 1588 aa22.28■■□□□ 1.16
Ccdc187-201ENSMUST00000057224 Zcchc6Q5BLK4 1491 aaKnown RBP22.26■■□□□ 1.15
Ccdc187-201ENSMUST00000057224 Kdm5dQ62240 1548 aa22.2■■□□□ 1.14
Ccdc187-201ENSMUST00000057224 Baz1aO88379 1555 aa22.03■■□□□ 1.12
Ccdc187-201ENSMUST00000057224 NacadQ5SWP3 1504 aa22.01■■□□□ 1.11
Ccdc187-201ENSMUST00000057224 Crybg2B7ZCC2 1516 aa21.67■■□□□ 1.06
Ccdc187-201ENSMUST00000057224 Sycp2Q9CUU3 1500 aa21.56■■□□□ 1.04
Ccdc187-201ENSMUST00000057224 Smarca2Q6DIC0 1577 aa21.55■■□□□ 1.04
Ccdc187-201ENSMUST00000057224 Ccdc136Q3TVA9 1136 aa21.51■■□□□ 1.03
Ccdc187-201ENSMUST00000057224 HrcG5E8J6 738 aa21.37■■□□□ 1.01
Ccdc187-201ENSMUST00000057224 BicraF8VPZ9 1578 aa21.13■□□□□ 0.97
Ccdc187-201ENSMUST00000057224 Trim41Q5NCC3 630 aa21.11■□□□□ 0.97
Ccdc187-201ENSMUST00000057224 Cecr2E9Q2Z1 1453 aa21■□□□□ 0.95
Ccdc187-201ENSMUST00000057224 Brd4Q9ESU6 1400 aaKnown RBP20.92■□□□□ 0.94
Ccdc187-201ENSMUST00000057224 Cep164Q5DU05 1446 aa20.85■□□□□ 0.93
Ccdc187-201ENSMUST00000057224 Synj1Q8CHC4 1574 aa20.83■□□□□ 0.93
Ccdc187-201ENSMUST00000057224 Rpgrip1Q9EPQ2 1331 aa20.75■□□□□ 0.91
Ccdc187-201ENSMUST00000057224 CftrP26361 1476 aa20.69■□□□□ 0.9
Ccdc187-201ENSMUST00000057224 Golga3P55937 1487 aa20.68■□□□□ 0.9
Ccdc187-201ENSMUST00000057224 Rsf1E9PWW9 1441 aaKnown RBP20.65■□□□□ 0.9
Ccdc187-201ENSMUST00000057224 Cttnbp2B9EJA2 1648 aa20.64■□□□□ 0.89
Ccdc187-201ENSMUST00000057224 Acin1Q9JIX8 1338 aaKnown RBP20.6■□□□□ 0.89
Ccdc187-201ENSMUST00000057224 Smarca4Q3TKT4 1613 aaKnown RBP20.6■□□□□ 0.89
Ccdc187-201ENSMUST00000057224 Cngb1E1AZ71 1325 aa20.58■□□□□ 0.89
Ccdc187-201ENSMUST00000057224 Top2bQ64511 1612 aa20.58■□□□□ 0.88
Ccdc187-201ENSMUST00000057224 Ccdc88bQ4QRL3 1481 aa20.55■□□□□ 0.88
Ccdc187-201ENSMUST00000057224 Chic1Q8CBW7 227 aa20.55■□□□□ 0.88
Ccdc187-201ENSMUST00000057224 Ehmt2Q9Z148 1263 aaKnown RBP20.55■□□□□ 0.88
Ccdc187-201ENSMUST00000057224 Cc2d2aQ8CFW7 1633 aa20.35■□□□□ 0.85
Ccdc187-201ENSMUST00000057224 Esf1Q3V1V3 845 aaKnown RBP20.33■□□□□ 0.85
Ccdc187-201ENSMUST00000057224 Iqgap2Q3UQ44 1575 aa20.33■□□□□ 0.84
Ccdc187-201ENSMUST00000057224 Gab3Q8BSM5 595 aa20.24■□□□□ 0.83
Ccdc187-201ENSMUST00000057224 Atad2bE9Q166 1460 aaKnown RBP20.21■□□□□ 0.83
Ccdc187-201ENSMUST00000057224 Fmn1Q05860 1466 aa20.17■□□□□ 0.82
Ccdc187-201ENSMUST00000057224 Top2aQ01320 1528 aaKnown RBP20.11■□□□□ 0.81
Ccdc187-201ENSMUST00000057224 Pds5bQ4VA53 1446 aaKnown RBP20.11■□□□□ 0.81
Ccdc187-201ENSMUST00000057224 Rapgef2Q8CHG7 1496 aa20.03■□□□□ 0.8
Ccdc187-201ENSMUST00000057224 TnnQ80Z71 1560 aa19.99■□□□□ 0.79
Ccdc187-201ENSMUST00000057224 Wdr62Q3U3T8 1523 aa19.95■□□□□ 0.78
Ccdc187-201ENSMUST00000057224 Frmpd1A2AKB4 1549 aa19.93■□□□□ 0.78
Ccdc187-201ENSMUST00000057224 Unc13aQ4KUS2 1712 aa19.84■□□□□ 0.77
Ccdc187-201ENSMUST00000057224 Eif4g1Q6NZJ6 1600 aaKnown RBP19.83■□□□□ 0.76
Ccdc187-201ENSMUST00000057224 Cep162Q6ZQ06 1403 aa19.82■□□□□ 0.76
Ccdc187-201ENSMUST00000057224 Lamc3Q9R0B6 1581 aa19.8■□□□□ 0.76
Ccdc187-201ENSMUST00000057224 Ercc6F8VPZ5 1481 aa19.74■□□□□ 0.75
Ccdc187-201ENSMUST00000057224 Mier1Q5UAK0 511 aa19.63■□□□□ 0.73
Ccdc187-201ENSMUST00000057224 Camsap1A2AHC3 1581 aa19.61■□□□□ 0.73
Ccdc187-201ENSMUST00000057224 NrkQ9R0G8 1455 aa19.59■□□□□ 0.73
Ccdc187-201ENSMUST00000057224 Kif15Q6P9L6 1387 aa19.59■□□□□ 0.73
Ccdc187-201ENSMUST00000057224 Thoc2B1AZI6 1594 aaKnown RBP19.58■□□□□ 0.73
Ccdc187-201ENSMUST00000057224 PtprkP35822 1457 aa19.58■□□□□ 0.73
Ccdc187-201ENSMUST00000057224 Pcgf6Q99NA9 353 aa19.58■□□□□ 0.72
Ccdc187-201ENSMUST00000057224 Arhgap35Q91YM2 1499 aa19.56■□□□□ 0.72
Ccdc187-201ENSMUST00000057224 Npm2Q80W85 207 aa19.55■□□□□ 0.72
Ccdc187-201ENSMUST00000057224 Myt1lP97500 1187 aa19.53■□□□□ 0.72
Ccdc187-201ENSMUST00000057224 Shroom4Q1W617 1475 aa19.5■□□□□ 0.71
Ccdc187-201ENSMUST00000057224 NefmP08553 848 aa19.5■□□□□ 0.71
Ccdc187-201ENSMUST00000057224 Grin2bQ01097 1482 aa19.44■□□□□ 0.7
Ccdc187-201ENSMUST00000057224 Phldb1Q6PDH0 1371 aaKnown RBP19.43■□□□□ 0.7
Ccdc187-201ENSMUST00000057224 Clip1Q922J3 1391 aa19.43■□□□□ 0.7
Ccdc187-201ENSMUST00000057224 Map3k1P53349 1493 aa19.42■□□□□ 0.7
Ccdc187-201ENSMUST00000057224 Ccdc18Q640L5 1455 aa19.41■□□□□ 0.7
Ccdc187-201ENSMUST00000057224 UbtfP25976 765 aaKnown RBP19.41■□□□□ 0.7
Ccdc187-201ENSMUST00000057224 Il27Q8K3I6 234 aa19.38■□□□□ 0.69
Ccdc187-201ENSMUST00000057224 Supt5hO55201 1082 aaKnown RBP19.37■□□□□ 0.69
Ccdc187-201ENSMUST00000057224 Fam135aQ6NS59 1506 aa19.36■□□□□ 0.69
Ccdc187-201ENSMUST00000057224 Arap1Q4LDD4 1452 aa19.33■□□□□ 0.69
Ccdc187-201ENSMUST00000057224 Mroh2bQ7M6Y6 1581 aa19.31■□□□□ 0.68
Ccdc187-201ENSMUST00000057224 Cux2P70298 1426 aa19.3■□□□□ 0.68
Ccdc187-201ENSMUST00000057224 Eea1Q8BL66 1411 aa19.29■□□□□ 0.68
Ccdc187-201ENSMUST00000057224 Arhgef5E9Q7D5 1581 aa19.28■□□□□ 0.68
Ccdc187-201ENSMUST00000057224 Erich3F6QRE9 1637 aa19.26■□□□□ 0.67
Ccdc187-201ENSMUST00000057224 Plekhg3Q4VAC9 1341 aa19.25■□□□□ 0.67
Ccdc187-201ENSMUST00000057224 Ncapd3Q6ZQK0 1506 aa19.25■□□□□ 0.67
Ccdc187-201ENSMUST00000057224 AqrQ8CFQ3 1481 aaKnown RBP19.24■□□□□ 0.67
Ccdc187-201ENSMUST00000057224 Zeb1Q64318 1117 aa19.23■□□□□ 0.67
Ccdc187-201ENSMUST00000057224 Baz1bQ9Z277 1479 aa19.22■□□□□ 0.67
Ccdc187-201ENSMUST00000057224 Ankrd26Q811D2 1581 aa19.21■□□□□ 0.67
Ccdc187-201ENSMUST00000057224 Ubl4bQ9CQ84 188 aa19.2■□□□□ 0.66
Ccdc187-201ENSMUST00000057224 Setd5Q5XJV7 1441 aa19.19■□□□□ 0.66
Ccdc187-201ENSMUST00000057224 Efcab5A0JP43 1406 aa19.17■□□□□ 0.66
Ccdc187-201ENSMUST00000057224 Tiam1Q60610 1591 aa19.16■□□□□ 0.66
Ccdc187-201ENSMUST00000057224 PogzQ8BZH4 1409 aaKnown RBP19.16■□□□□ 0.66
Ccdc187-201ENSMUST00000057224 LrpprcQ6PB66 1392 aaKnown RBP19.15■□□□□ 0.66
Ccdc187-201ENSMUST00000057224 Duox2A2AQ99 1517 aa19.12■□□□□ 0.65
Ccdc187-201ENSMUST00000057224 Lmo7E9PYF4 1699 aaKnown RBP19.11■□□□□ 0.65
Ccdc187-201ENSMUST00000057224 Npm1Q61937 292 aaKnown RBP19.11■□□□□ 0.65
Ccdc187-201ENSMUST00000057224 Pcf11G3X9Z4 1553 aa19.1■□□□□ 0.65
Ccdc187-201ENSMUST00000057224 Samd9lQ69Z37 1561 aa19.06■□□□□ 0.64
Ccdc187-201ENSMUST00000057224 Naip1Q9QWK5 1403 aa19.06■□□□□ 0.64
Ccdc187-201ENSMUST00000057224 Cux1P53564 1515 aa19.06■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms