RNA–Protein interactions for RNA: ENSMUST00000056601.10

Vps53-201, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps53, Length 2,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-201ENSMUST00000056601 NischQ80TM9 1593 aa26.47■■□□□ 1.83
Vps53-201ENSMUST00000056601 Abcc9P70170 1546 aa25.66■■□□□ 1.7
Vps53-201ENSMUST00000056601 Gm35339A0A140LHH9 1649 aa25.57■■□□□ 1.68
Vps53-201ENSMUST00000056601 Rhox8Q6VSS7 320 aa25.37■■□□□ 1.65
Vps53-201ENSMUST00000056601 Rtl1Q7M732 1744 aa25.05■■□□□ 1.6
Vps53-201ENSMUST00000056601 Abcc8B2RUS7 1588 aa24.94■■□□□ 1.58
Vps53-201ENSMUST00000056601 Ccdc180J3QNE4 1664 aa24.77■■□□□ 1.56
Vps53-201ENSMUST00000056601 Rpgrip1Q9EPQ2 1331 aa24.46■■□□□ 1.51
Vps53-201ENSMUST00000056601 Zcchc6Q5BLK4 1491 aaKnown RBP24.04■■□□□ 1.44
Vps53-201ENSMUST00000056601 Acin1Q9JIX8 1338 aaKnown RBP23.93■■□□□ 1.42
Vps53-201ENSMUST00000056601 Ehmt2Q9Z148 1263 aaKnown RBP23.8■■□□□ 1.4
Vps53-201ENSMUST00000056601 HrcG5E8J6 738 aa23.58■■□□□ 1.37
Vps53-201ENSMUST00000056601 Ccdc136Q3TVA9 1136 aa23.46■■□□□ 1.35
Vps53-201ENSMUST00000056601 Dcaf1Q80TR8 1506 aa23.45■■□□□ 1.34
Vps53-201ENSMUST00000056601 Pcgf6Q99NA9 353 aa23.28■■□□□ 1.32
Vps53-201ENSMUST00000056601 Rb1cc1Q9ESK9 1588 aa23.25■■□□□ 1.31
Vps53-201ENSMUST00000056601 Trim41Q5NCC3 630 aa23.12■■□□□ 1.29
Vps53-201ENSMUST00000056601 ScribQ80U72 1612 aa23.01■■□□□ 1.27
Vps53-201ENSMUST00000056601 Baz1aO88379 1555 aa22.94■■□□□ 1.26
Vps53-201ENSMUST00000056601 Supt5hO55201 1082 aaKnown RBP22.8■■□□□ 1.24
Vps53-201ENSMUST00000056601 Kdm5dQ62240 1548 aa22.73■■□□□ 1.23
Vps53-201ENSMUST00000056601 Cep164Q5DU05 1446 aa22.72■■□□□ 1.23
Vps53-201ENSMUST00000056601 NacadQ5SWP3 1504 aa22.45■■□□□ 1.18
Vps53-201ENSMUST00000056601 Smarca2Q6DIC0 1577 aa22.45■■□□□ 1.18
Vps53-201ENSMUST00000056601 Zeb1Q64318 1117 aa22.44■■□□□ 1.18
Vps53-201ENSMUST00000056601 Gab3Q8BSM5 595 aa22.44■■□□□ 1.18
Vps53-201ENSMUST00000056601 Cngb1E1AZ71 1325 aa22.4■■□□□ 1.18
Vps53-201ENSMUST00000056601 Neurod1Q60867 357 aa22.39■■□□□ 1.18
Vps53-201ENSMUST00000056601 Chic1Q8CBW7 227 aa22.35■■□□□ 1.17
Vps53-201ENSMUST00000056601 Rsf1E9PWW9 1441 aaKnown RBP22.29■■□□□ 1.16
Vps53-201ENSMUST00000056601 Crybg2B7ZCC2 1516 aa22.29■■□□□ 1.16
Vps53-201ENSMUST00000056601 NefmP08553 848 aa22.26■■□□□ 1.15
Vps53-201ENSMUST00000056601 Mier1Q5UAK0 511 aa22.21■■□□□ 1.15
Vps53-201ENSMUST00000056601 Sall2Q9QX96 1004 aa22.08■■□□□ 1.13
Vps53-201ENSMUST00000056601 Ccdc88bQ4QRL3 1481 aa22.07■■□□□ 1.12
Vps53-201ENSMUST00000056601 Brd4Q9ESU6 1400 aaKnown RBP22.03■■□□□ 1.12
Vps53-201ENSMUST00000056601 Las1lA2BE28 776 aaKnown RBP22.02■■□□□ 1.12
Vps53-201ENSMUST00000056601 Golga3P55937 1487 aa21.96■■□□□ 1.11
Vps53-201ENSMUST00000056601 Sycp2Q9CUU3 1500 aa21.93■■□□□ 1.1
Vps53-201ENSMUST00000056601 Cecr2E9Q2Z1 1453 aa21.88■■□□□ 1.09
Vps53-201ENSMUST00000056601 Esf1Q3V1V3 845 aaKnown RBP21.83■■□□□ 1.08
Vps53-201ENSMUST00000056601 Wdr66E9Q743 1299 aa21.8■■□□□ 1.08
Vps53-201ENSMUST00000056601 UbtfP25976 765 aaKnown RBP21.79■■□□□ 1.08
Vps53-201ENSMUST00000056601 Synj1Q8CHC4 1574 aa21.79■■□□□ 1.08
Vps53-201ENSMUST00000056601 Anks4bQ8K3X6 423 aa21.78■■□□□ 1.08
Vps53-201ENSMUST00000056601 Csrnp3P59055 597 aa21.69■■□□□ 1.06
Vps53-201ENSMUST00000056601 Aebp2Q9Z248 504 aaKnown RBP21.68■■□□□ 1.06
Vps53-201ENSMUST00000056601 1700123L14RikQ3V2K7 440 aa21.67■■□□□ 1.06
Vps53-201ENSMUST00000056601 CftrP26361 1476 aa21.57■■□□□ 1.04
Vps53-201ENSMUST00000056601 Cdk11bP24788 784 aaKnown RBP21.56■■□□□ 1.04
Vps53-201ENSMUST00000056601 Top2bQ64511 1612 aa21.56■■□□□ 1.04
Vps53-201ENSMUST00000056601 Ppargc1bQ8VHJ7 1014 aa21.55■■□□□ 1.04
Vps53-201ENSMUST00000056601 ClspnQ80YR7 1315 aa21.54■■□□□ 1.04
Vps53-201ENSMUST00000056601 Nop58Q6DFW4 536 aaKnown RBP21.53■■□□□ 1.04
Vps53-201ENSMUST00000056601 Myt1lP97500 1187 aa21.5■■□□□ 1.03
Vps53-201ENSMUST00000056601 Rapgef2Q8CHG7 1496 aa21.45■■□□□ 1.02
Vps53-201ENSMUST00000056601 Cc2d2aQ8CFW7 1633 aa21.45■■□□□ 1.02
Vps53-201ENSMUST00000056601 BicraF8VPZ9 1578 aa21.4■■□□□ 1.02
Vps53-201ENSMUST00000056601 Cttnbp2B9EJA2 1648 aa21.39■■□□□ 1.01
Vps53-201ENSMUST00000056601 TonslQ6NZL6 1363 aa21.39■■□□□ 1.01
Vps53-201ENSMUST00000056601 Cep162Q6ZQ06 1403 aa21.32■■□□□ 1
Vps53-201ENSMUST00000056601 Aplp2Q06335 707 aa21.32■■□□□ 1
Vps53-201ENSMUST00000056601 Npm2Q80W85 207 aa21.29■■□□□ 1
Vps53-201ENSMUST00000056601 Fmn1Q05860 1466 aa21.26■□□□□ 0.99
Vps53-201ENSMUST00000056601 Plekhg3Q4VAC9 1341 aa21.24■□□□□ 0.99
Vps53-201ENSMUST00000056601 Top2aQ01320 1528 aaKnown RBP21.24■□□□□ 0.99
Vps53-201ENSMUST00000056601 CenpbP27790 599 aa21.23■□□□□ 0.99
Vps53-201ENSMUST00000056601 Clip1Q922J3 1391 aa21.19■□□□□ 0.98
Vps53-201ENSMUST00000056601 Gm38655A0A286YDK6 273 aa21.18■□□□□ 0.98
Vps53-201ENSMUST00000056601 Smarca4Q3TKT4 1613 aaKnown RBP21.13■□□□□ 0.97
Vps53-201ENSMUST00000056601 Ncapd3Q6ZQK0 1506 aa21.05■□□□□ 0.96
Vps53-201ENSMUST00000056601 Myt1Q8CFC2 1127 aa21.04■□□□□ 0.96
Vps53-201ENSMUST00000056601 Eid3Q3V124 375 aa20.96■□□□□ 0.95
Vps53-201ENSMUST00000056601 Eif4g1Q6NZJ6 1600 aaKnown RBP20.92■□□□□ 0.94
Vps53-201ENSMUST00000056601 Ap3b1Q9Z1T1 1105 aa20.9■□□□□ 0.94
Vps53-201ENSMUST00000056601 Hnrnpul2Q00PI9 745 aaKnown RBP20.83■□□□□ 0.93
Vps53-201ENSMUST00000056601 Iqgap2Q3UQ44 1575 aa20.81■□□□□ 0.92
Vps53-201ENSMUST00000056601 Tnnt3Q9QZ47 272 aa20.8■□□□□ 0.92
Vps53-201ENSMUST00000056601 Eea1Q8BL66 1411 aa20.8■□□□□ 0.92
Vps53-201ENSMUST00000056601 Arhgap35Q91YM2 1499 aa20.79■□□□□ 0.92
Vps53-201ENSMUST00000056601 Arap1Q4LDD4 1452 aa20.78■□□□□ 0.92
Vps53-201ENSMUST00000056601 SafbD3YXK2 937 aaKnown RBP20.77■□□□□ 0.92
Vps53-201ENSMUST00000056601 Mapk8ip2Q9ERE9 830 aa20.74■□□□□ 0.91
Vps53-201ENSMUST00000056601 Setd5Q5XJV7 1441 aa20.72■□□□□ 0.91
Vps53-201ENSMUST00000056601 Kdm5bQ80Y84 1544 aa20.7■□□□□ 0.91
Vps53-201ENSMUST00000056601 PtprkP35822 1457 aa20.7■□□□□ 0.9
Vps53-201ENSMUST00000056601 Il27Q8K3I6 234 aa20.69■□□□□ 0.9
Vps53-201ENSMUST00000056601 Fam71e1A1L3C1 212 aa20.68■□□□□ 0.9
Vps53-201ENSMUST00000056601 Ccdc18Q640L5 1455 aa20.68■□□□□ 0.9
Vps53-201ENSMUST00000056601 Arhgef5E9Q7D5 1581 aa20.67■□□□□ 0.9
Vps53-201ENSMUST00000056601 TnnQ80Z71 1560 aa20.65■□□□□ 0.9
Vps53-201ENSMUST00000056601 Baz1bQ9Z277 1479 aa20.63■□□□□ 0.89
Vps53-201ENSMUST00000056601 NrkQ9R0G8 1455 aa20.62■□□□□ 0.89
Vps53-201ENSMUST00000056601 NclP09405 707 aaKnown RBP20.61■□□□□ 0.89
Vps53-201ENSMUST00000056601 Fam50aQ9WV03 339 aaKnown RBP20.59■□□□□ 0.89
Vps53-201ENSMUST00000056601 BlmO88700 1416 aa20.56■□□□□ 0.88
Vps53-201ENSMUST00000056601 Atad2bE9Q166 1460 aaKnown RBP20.54■□□□□ 0.88
Vps53-201ENSMUST00000056601 Rpap1Q80TE0 1409 aa20.54■□□□□ 0.88
Vps53-201ENSMUST00000056601 Stra8P70278 393 aa20.54■□□□□ 0.88
Vps53-201ENSMUST00000056601 Tiam1Q60610 1591 aa20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms