RNA–Protein interactions for RNA: ENSMUST00000056370.12

Pmf1-201, Transcript of Polyamine-modulated factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pmf1, Length 1,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pmf1-201ENSMUST00000056370 Gm35339A0A140LHH9 1649 aa34.52■■■■□ 3.12
Pmf1-201ENSMUST00000056370 NischQ80TM9 1593 aa33.94■■■■□ 3.02
Pmf1-201ENSMUST00000056370 Abcc8B2RUS7 1588 aa32.86■■■□□ 2.85
Pmf1-201ENSMUST00000056370 Abcc9P70170 1546 aa32.84■■■□□ 2.85
Pmf1-201ENSMUST00000056370 ScribQ80U72 1612 aa31.78■■■□□ 2.68
Pmf1-201ENSMUST00000056370 NacadQ5SWP3 1504 aa30.73■■■□□ 2.51
Pmf1-201ENSMUST00000056370 Kdm5dQ62240 1548 aa30.67■■■□□ 2.5
Pmf1-201ENSMUST00000056370 Dcaf1Q80TR8 1506 aa30.2■■■□□ 2.42
Pmf1-201ENSMUST00000056370 Sycp2Q9CUU3 1500 aa30.13■■■□□ 2.41
Pmf1-201ENSMUST00000056370 BicraF8VPZ9 1578 aa29.77■■■□□ 2.36
Pmf1-201ENSMUST00000056370 Rb1cc1Q9ESK9 1588 aa29.57■■■□□ 2.32
Pmf1-201ENSMUST00000056370 Ccdc180J3QNE4 1664 aa29.21■■■□□ 2.27
Pmf1-201ENSMUST00000056370 Baz1aO88379 1555 aa29.14■■■□□ 2.26
Pmf1-201ENSMUST00000056370 Rhox8Q6VSS7 320 aa29.1■■■□□ 2.25
Pmf1-201ENSMUST00000056370 Crybg2B7ZCC2 1516 aa29.08■■■□□ 2.25
Pmf1-201ENSMUST00000056370 Dnajc5bQ9CQ94 199 aa29.06■■■□□ 2.24
Pmf1-201ENSMUST00000056370 Pds5bQ4VA53 1446 aaKnown RBP28.89■■■□□ 2.22
Pmf1-201ENSMUST00000056370 Thoc2B1AZI6 1594 aaKnown RBP28.75■■■□□ 2.19
Pmf1-201ENSMUST00000056370 Zcchc6Q5BLK4 1491 aaKnown RBP28.68■■■□□ 2.18
Pmf1-201ENSMUST00000056370 Atad2bE9Q166 1460 aaKnown RBP28.61■■■□□ 2.17
Pmf1-201ENSMUST00000056370 Smarca4Q3TKT4 1613 aaKnown RBP28.36■■■□□ 2.13
Pmf1-201ENSMUST00000056370 Smarca2Q6DIC0 1577 aa28.31■■■□□ 2.12
Pmf1-201ENSMUST00000056370 Cc2d2aQ8CFW7 1633 aa28.27■■■□□ 2.12
Pmf1-201ENSMUST00000056370 Ercc6F8VPZ5 1481 aa28.27■■■□□ 2.12
Pmf1-201ENSMUST00000056370 Cecr2E9Q2Z1 1453 aa28.23■■■□□ 2.11
Pmf1-201ENSMUST00000056370 Iqgap2Q3UQ44 1575 aa28.21■■■□□ 2.11
Pmf1-201ENSMUST00000056370 Fam135aQ6NS59 1506 aa28.06■■■□□ 2.08
Pmf1-201ENSMUST00000056370 Wdr62Q3U3T8 1523 aa27.99■■■□□ 2.07
Pmf1-201ENSMUST00000056370 Frmpd1A2AKB4 1549 aa27.95■■■□□ 2.06
Pmf1-201ENSMUST00000056370 Rtl1Q7M732 1744 aa27.84■■■□□ 2.05
Pmf1-201ENSMUST00000056370 Phldb1Q6PDH0 1371 aaKnown RBP27.8■■■□□ 2.04
Pmf1-201ENSMUST00000056370 Baz1bQ9Z277 1479 aa27.72■■■□□ 2.03
Pmf1-201ENSMUST00000056370 Unc13aQ4KUS2 1712 aa27.68■■■□□ 2.02
Pmf1-201ENSMUST00000056370 Cttnbp2B9EJA2 1648 aa27.57■■■□□ 2
Pmf1-201ENSMUST00000056370 CftrP26361 1476 aa27.57■■■□□ 2
Pmf1-201ENSMUST00000056370 Ubl4bQ9CQ84 188 aa27.52■■■□□ 2
Pmf1-201ENSMUST00000056370 Synj1Q8CHC4 1574 aa27.52■■■□□ 2
Pmf1-201ENSMUST00000056370 Brd4Q9ESU6 1400 aaKnown RBP27.44■■□□□ 1.98
Pmf1-201ENSMUST00000056370 Mrc2Q64449 1479 aa27.38■■□□□ 1.97
Pmf1-201ENSMUST00000056370 Ccdc136Q3TVA9 1136 aa27.28■■□□□ 1.96
Pmf1-201ENSMUST00000056370 Esf1Q3V1V3 845 aaKnown RBP26.99■■□□□ 1.91
Pmf1-201ENSMUST00000056370 Rsf1E9PWW9 1441 aaKnown RBP26.92■■□□□ 1.9
Pmf1-201ENSMUST00000056370 Cux2P70298 1426 aa26.89■■□□□ 1.89
Pmf1-201ENSMUST00000056370 Trim41Q5NCC3 630 aa26.87■■□□□ 1.89
Pmf1-201ENSMUST00000056370 Kif15Q6P9L6 1387 aa26.86■■□□□ 1.89
Pmf1-201ENSMUST00000056370 Lrriq1Q0P5X1 1673 aa26.83■■□□□ 1.89
Pmf1-201ENSMUST00000056370 Lamc3Q9R0B6 1581 aa26.81■■□□□ 1.88
Pmf1-201ENSMUST00000056370 Kif21aQ9QXL2 1672 aa26.77■■□□□ 1.88
Pmf1-201ENSMUST00000056370 Npm1Q61937 292 aaKnown RBP26.57■■□□□ 1.84
Pmf1-201ENSMUST00000056370 Top2bQ64511 1612 aa26.5■■□□□ 1.83
Pmf1-201ENSMUST00000056370 Cep164Q5DU05 1446 aa26.49■■□□□ 1.83
Pmf1-201ENSMUST00000056370 TnnQ80Z71 1560 aa26.49■■□□□ 1.83
Pmf1-201ENSMUST00000056370 Golga3P55937 1487 aa26.44■■□□□ 1.82
Pmf1-201ENSMUST00000056370 Eif4g3Q80XI3 1579 aaKnown RBP26.44■■□□□ 1.82
Pmf1-201ENSMUST00000056370 Dnajc5P60904 198 aa26.39■■□□□ 1.82
Pmf1-201ENSMUST00000056370 Ccdc18Q640L5 1455 aa26.36■■□□□ 1.81
Pmf1-201ENSMUST00000056370 Urb2E9Q7L1 1524 aaKnown RBP26.32■■□□□ 1.8
Pmf1-201ENSMUST00000056370 Dhx29Q6PGC1 1365 aaKnown RBP26.32■■□□□ 1.8
Pmf1-201ENSMUST00000056370 Camsap1A2AHC3 1581 aa26.31■■□□□ 1.8
Pmf1-201ENSMUST00000056370 Cngb1E1AZ71 1325 aa26.27■■□□□ 1.8
Pmf1-201ENSMUST00000056370 Plb1Q3TTY0 1478 aa26.26■■□□□ 1.79
Pmf1-201ENSMUST00000056370 LrpprcQ6PB66 1392 aaKnown RBP26.26■■□□□ 1.79
Pmf1-201ENSMUST00000056370 Il27Q8K3I6 234 aa26.26■■□□□ 1.79
Pmf1-201ENSMUST00000056370 Crocc2F6XLV1 1638 aa26.23■■□□□ 1.79
Pmf1-201ENSMUST00000056370 Fmn1Q05860 1466 aa26.17■■□□□ 1.78
Pmf1-201ENSMUST00000056370 Shroom2A2ALU4 1481 aa26.15■■□□□ 1.78
Pmf1-201ENSMUST00000056370 PogzQ8BZH4 1409 aaKnown RBP26.11■■□□□ 1.77
Pmf1-201ENSMUST00000056370 Ift140E9PY46 1464 aa26.03■■□□□ 1.76
Pmf1-201ENSMUST00000056370 Duox2A2AQ99 1517 aa25.98■■□□□ 1.75
Pmf1-201ENSMUST00000056370 Rusc2Q80U22 1514 aa25.97■■□□□ 1.75
Pmf1-201ENSMUST00000056370 Grin2bQ01097 1482 aa25.92■■□□□ 1.74
Pmf1-201ENSMUST00000056370 Setd1bQ8CFT2 1985 aa25.89■■□□□ 1.74
Pmf1-201ENSMUST00000056370 Disp1Q3TDN0 1521 aa25.84■■□□□ 1.73
Pmf1-201ENSMUST00000056370 Pabpn1Q8CCS6 302 aaKnown RBP25.83■■□□□ 1.73
Pmf1-201ENSMUST00000056370 Col17a1Q07563 1470 aa25.8■■□□□ 1.72
Pmf1-201ENSMUST00000056370 Samd9lQ69Z37 1561 aa25.8■■□□□ 1.72
Pmf1-201ENSMUST00000056370 Pbrm1Q8BSQ9 1634 aaKnown RBP25.77■■□□□ 1.72
Pmf1-201ENSMUST00000056370 Efcab5A0JP43 1406 aa25.76■■□□□ 1.71
Pmf1-201ENSMUST00000056370 Nup160Q9Z0W3 1402 aaKnown RBP25.73■■□□□ 1.71
Pmf1-201ENSMUST00000056370 Ccdc88bQ4QRL3 1481 aa25.71■■□□□ 1.71
Pmf1-201ENSMUST00000056370 Cc2d2bA0A286YDU8 1405 aa25.68■■□□□ 1.7
Pmf1-201ENSMUST00000056370 Top2aQ01320 1528 aaKnown RBP25.67■■□□□ 1.7
Pmf1-201ENSMUST00000056370 NrkQ9R0G8 1455 aa25.62■■□□□ 1.69
Pmf1-201ENSMUST00000056370 Pelp1Q9DBD5 1123 aaKnown RBP25.62■■□□□ 1.69
Pmf1-201ENSMUST00000056370 Rad54l2Q99NG0 1466 aa25.6■■□□□ 1.69
Pmf1-201ENSMUST00000056370 Magi3Q9EQJ9 1476 aa25.56■■□□□ 1.68
Pmf1-201ENSMUST00000056370 Zcchc11B2RX14 1644 aaKnown RBP25.55■■□□□ 1.68
Pmf1-201ENSMUST00000056370 Grin2aP35436 1464 aa25.55■■□□□ 1.68
Pmf1-201ENSMUST00000056370 AqrQ8CFQ3 1481 aaKnown RBP25.5■■□□□ 1.67
Pmf1-201ENSMUST00000056370 Chic1Q8CBW7 227 aa25.49■■□□□ 1.67
Pmf1-201ENSMUST00000056370 Shroom4Q1W617 1475 aa25.48■■□□□ 1.67
Pmf1-201ENSMUST00000056370 PtprkP35822 1457 aa25.47■■□□□ 1.67
Pmf1-201ENSMUST00000056370 Gpatch8A2A6A1 1505 aa25.44■■□□□ 1.66
Pmf1-201ENSMUST00000056370 Fgd6Q69ZL1 1399 aa25.41■■□□□ 1.66
Pmf1-201ENSMUST00000056370 SynmQ70IV5 1561 aa25.4■■□□□ 1.66
Pmf1-201ENSMUST00000056370 Pla2r1Q62028 1487 aa25.39■■□□□ 1.65
Pmf1-201ENSMUST00000056370 Adgrl3Q80TS3 1537 aa25.26■■□□□ 1.63
Pmf1-201ENSMUST00000056370 Cep170Q6A065 1588 aa25.26■■□□□ 1.63
Pmf1-201ENSMUST00000056370 Gapvd1Q6PAR5 1458 aa25.24■■□□□ 1.63
Pmf1-201ENSMUST00000056370 Abcc1O35379 1528 aa25.21■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 80.5 ms