RNA–Protein interactions for RNA: ENSMUST00000054594.14

Syne4-201, Transcript of Nesprin-4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Syne4, Length 1,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4-201ENSMUST00000054594 Gm35339A0A140LHH9 1649 aa35.49■■■■□ 3.27
Syne4-201ENSMUST00000054594 NischQ80TM9 1593 aa34.81■■■■□ 3.16
Syne4-201ENSMUST00000054594 Abcc8B2RUS7 1588 aa33.76■■■□□ 2.99
Syne4-201ENSMUST00000054594 Abcc9P70170 1546 aa33.71■■■□□ 2.99
Syne4-201ENSMUST00000054594 ScribQ80U72 1612 aa32.71■■■□□ 2.83
Syne4-201ENSMUST00000054594 NacadQ5SWP3 1504 aa31.61■■■□□ 2.65
Syne4-201ENSMUST00000054594 Kdm5dQ62240 1548 aa31.53■■■□□ 2.64
Syne4-201ENSMUST00000054594 Dcaf1Q80TR8 1506 aa31.04■■■□□ 2.56
Syne4-201ENSMUST00000054594 Sycp2Q9CUU3 1500 aa31.01■■■□□ 2.55
Syne4-201ENSMUST00000054594 BicraF8VPZ9 1578 aa30.63■■■□□ 2.49
Syne4-201ENSMUST00000054594 Rb1cc1Q9ESK9 1588 aa30.32■■■□□ 2.44
Syne4-201ENSMUST00000054594 Dnajc5bQ9CQ94 199 aa30■■■□□ 2.39
Syne4-201ENSMUST00000054594 Ccdc180J3QNE4 1664 aa29.95■■■□□ 2.38
Syne4-201ENSMUST00000054594 Baz1aO88379 1555 aa29.9■■■□□ 2.38
Syne4-201ENSMUST00000054594 Crybg2B7ZCC2 1516 aa29.87■■■□□ 2.37
Syne4-201ENSMUST00000054594 Pds5bQ4VA53 1446 aaKnown RBP29.78■■■□□ 2.36
Syne4-201ENSMUST00000054594 Thoc2B1AZI6 1594 aaKnown RBP29.67■■■□□ 2.34
Syne4-201ENSMUST00000054594 Rhox8Q6VSS7 320 aa29.64■■■□□ 2.33
Syne4-201ENSMUST00000054594 Atad2bE9Q166 1460 aaKnown RBP29.46■■■□□ 2.31
Syne4-201ENSMUST00000054594 Zcchc6Q5BLK4 1491 aaKnown RBP29.39■■■□□ 2.3
Syne4-201ENSMUST00000054594 Smarca4Q3TKT4 1613 aaKnown RBP29.14■■■□□ 2.26
Syne4-201ENSMUST00000054594 Cc2d2aQ8CFW7 1633 aa29.12■■■□□ 2.25
Syne4-201ENSMUST00000054594 Smarca2Q6DIC0 1577 aa29.12■■■□□ 2.25
Syne4-201ENSMUST00000054594 Ercc6F8VPZ5 1481 aa29.1■■■□□ 2.25
Syne4-201ENSMUST00000054594 Iqgap2Q3UQ44 1575 aa29.01■■■□□ 2.23
Syne4-201ENSMUST00000054594 Cecr2E9Q2Z1 1453 aa28.96■■■□□ 2.23
Syne4-201ENSMUST00000054594 Fam135aQ6NS59 1506 aa28.95■■■□□ 2.22
Syne4-201ENSMUST00000054594 Wdr62Q3U3T8 1523 aa28.82■■■□□ 2.2
Syne4-201ENSMUST00000054594 Frmpd1A2AKB4 1549 aa28.75■■■□□ 2.19
Syne4-201ENSMUST00000054594 Baz1bQ9Z277 1479 aa28.67■■■□□ 2.18
Syne4-201ENSMUST00000054594 Phldb1Q6PDH0 1371 aaKnown RBP28.62■■■□□ 2.17
Syne4-201ENSMUST00000054594 Unc13aQ4KUS2 1712 aa28.4■■■□□ 2.14
Syne4-201ENSMUST00000054594 Rtl1Q7M732 1744 aa28.35■■■□□ 2.13
Syne4-201ENSMUST00000054594 CftrP26361 1476 aa28.29■■■□□ 2.12
Syne4-201ENSMUST00000054594 Cttnbp2B9EJA2 1648 aa28.28■■■□□ 2.12
Syne4-201ENSMUST00000054594 Ubl4bQ9CQ84 188 aa28.27■■■□□ 2.12
Syne4-201ENSMUST00000054594 Mrc2Q64449 1479 aa28.21■■■□□ 2.11
Syne4-201ENSMUST00000054594 Synj1Q8CHC4 1574 aa28.19■■■□□ 2.1
Syne4-201ENSMUST00000054594 Brd4Q9ESU6 1400 aaKnown RBP28.13■■■□□ 2.09
Syne4-201ENSMUST00000054594 Ccdc136Q3TVA9 1136 aa27.8■■■□□ 2.04
Syne4-201ENSMUST00000054594 Rsf1E9PWW9 1441 aaKnown RBP27.64■■■□□ 2.02
Syne4-201ENSMUST00000054594 Cux2P70298 1426 aa27.64■■■□□ 2.01
Syne4-201ENSMUST00000054594 Lrriq1Q0P5X1 1673 aa27.63■■■□□ 2.01
Syne4-201ENSMUST00000054594 Esf1Q3V1V3 845 aaKnown RBP27.59■■■□□ 2.01
Syne4-201ENSMUST00000054594 Kif15Q6P9L6 1387 aa27.57■■■□□ 2
Syne4-201ENSMUST00000054594 Lamc3Q9R0B6 1581 aa27.54■■■□□ 2
Syne4-201ENSMUST00000054594 Kif21aQ9QXL2 1672 aa27.52■■■□□ 2
Syne4-201ENSMUST00000054594 Trim41Q5NCC3 630 aa27.42■■□□□ 1.98
Syne4-201ENSMUST00000054594 Dnajc5P60904 198 aa27.38■■□□□ 1.97
Syne4-201ENSMUST00000054594 Eif4g3Q80XI3 1579 aaKnown RBP27.26■■□□□ 1.95
Syne4-201ENSMUST00000054594 Npm1Q61937 292 aaKnown RBP27.25■■□□□ 1.95
Syne4-201ENSMUST00000054594 Cep164Q5DU05 1446 aa27.22■■□□□ 1.95
Syne4-201ENSMUST00000054594 TnnQ80Z71 1560 aa27.19■■□□□ 1.94
Syne4-201ENSMUST00000054594 Top2bQ64511 1612 aa27.12■■□□□ 1.93
Syne4-201ENSMUST00000054594 Urb2E9Q7L1 1524 aaKnown RBP27.08■■□□□ 1.93
Syne4-201ENSMUST00000054594 Ccdc18Q640L5 1455 aa27.07■■□□□ 1.92
Syne4-201ENSMUST00000054594 Shroom2A2ALU4 1481 aa27.06■■□□□ 1.92
Syne4-201ENSMUST00000054594 Golga3P55937 1487 aa27.05■■□□□ 1.92
Syne4-201ENSMUST00000054594 Dhx29Q6PGC1 1365 aaKnown RBP27.04■■□□□ 1.92
Syne4-201ENSMUST00000054594 Plb1Q3TTY0 1478 aa27■■□□□ 1.91
Syne4-201ENSMUST00000054594 Camsap1A2AHC3 1581 aa27■■□□□ 1.91
Syne4-201ENSMUST00000054594 LrpprcQ6PB66 1392 aaKnown RBP26.98■■□□□ 1.91
Syne4-201ENSMUST00000054594 Crocc2F6XLV1 1638 aa26.95■■□□□ 1.9
Syne4-201ENSMUST00000054594 Il27Q8K3I6 234 aa26.86■■□□□ 1.89
Syne4-201ENSMUST00000054594 PogzQ8BZH4 1409 aaKnown RBP26.82■■□□□ 1.88
Syne4-201ENSMUST00000054594 Fmn1Q05860 1466 aa26.81■■□□□ 1.88
Syne4-201ENSMUST00000054594 Ift140E9PY46 1464 aa26.79■■□□□ 1.88
Syne4-201ENSMUST00000054594 Cngb1E1AZ71 1325 aa26.77■■□□□ 1.88
Syne4-201ENSMUST00000054594 Rusc2Q80U22 1514 aa26.75■■□□□ 1.87
Syne4-201ENSMUST00000054594 Col17a1Q07563 1470 aa26.68■■□□□ 1.86
Syne4-201ENSMUST00000054594 Duox2A2AQ99 1517 aa26.67■■□□□ 1.86
Syne4-201ENSMUST00000054594 Pabpn1Q8CCS6 302 aaKnown RBP26.61■■□□□ 1.85
Syne4-201ENSMUST00000054594 Grin2bQ01097 1482 aa26.6■■□□□ 1.85
Syne4-201ENSMUST00000054594 Disp1Q3TDN0 1521 aa26.56■■□□□ 1.84
Syne4-201ENSMUST00000054594 Setd1bQ8CFT2 1985 aa26.5■■□□□ 1.83
Syne4-201ENSMUST00000054594 Pbrm1Q8BSQ9 1634 aaKnown RBP26.5■■□□□ 1.83
Syne4-201ENSMUST00000054594 Samd9lQ69Z37 1561 aa26.49■■□□□ 1.83
Syne4-201ENSMUST00000054594 Nup160Q9Z0W3 1402 aaKnown RBP26.47■■□□□ 1.83
Syne4-201ENSMUST00000054594 Efcab5A0JP43 1406 aa26.44■■□□□ 1.82
Syne4-201ENSMUST00000054594 Cc2d2bA0A286YDU8 1405 aa26.42■■□□□ 1.82
Syne4-201ENSMUST00000054594 Zcchc11B2RX14 1644 aaKnown RBP26.42■■□□□ 1.82
Syne4-201ENSMUST00000054594 Pelp1Q9DBD5 1123 aaKnown RBP26.34■■□□□ 1.81
Syne4-201ENSMUST00000054594 Top2aQ01320 1528 aaKnown RBP26.27■■□□□ 1.8
Syne4-201ENSMUST00000054594 NrkQ9R0G8 1455 aa26.27■■□□□ 1.8
Syne4-201ENSMUST00000054594 Grin2aP35436 1464 aa26.26■■□□□ 1.79
Syne4-201ENSMUST00000054594 Magi3Q9EQJ9 1476 aa26.26■■□□□ 1.79
Syne4-201ENSMUST00000054594 Ccdc88bQ4QRL3 1481 aa26.25■■□□□ 1.79
Syne4-201ENSMUST00000054594 Rad54l2Q99NG0 1466 aa26.25■■□□□ 1.79
Syne4-201ENSMUST00000054594 AqrQ8CFQ3 1481 aaKnown RBP26.23■■□□□ 1.79
Syne4-201ENSMUST00000054594 Gpatch8A2A6A1 1505 aa26.21■■□□□ 1.79
Syne4-201ENSMUST00000054594 Fgd6Q69ZL1 1399 aa26.15■■□□□ 1.78
Syne4-201ENSMUST00000054594 Shroom4Q1W617 1475 aa26.11■■□□□ 1.77
Syne4-201ENSMUST00000054594 PtprkP35822 1457 aa26.07■■□□□ 1.76
Syne4-201ENSMUST00000054594 Pla2r1Q62028 1487 aa26.07■■□□□ 1.76
Syne4-201ENSMUST00000054594 SynmQ70IV5 1561 aa26.06■■□□□ 1.76
Syne4-201ENSMUST00000054594 Adgrl3Q80TS3 1537 aa26.05■■□□□ 1.76
Syne4-201ENSMUST00000054594 Cep170Q6A065 1588 aa26.03■■□□□ 1.76
Syne4-201ENSMUST00000054594 Gapvd1Q6PAR5 1458 aa26■■□□□ 1.75
Syne4-201ENSMUST00000054594 Chic1Q8CBW7 227 aa25.96■■□□□ 1.75
Syne4-201ENSMUST00000054594 Arhgef5E9Q7D5 1581 aa25.95■■□□□ 1.74
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms