RNA–Protein interactions for RNA: ENSMUST00000053872.11

Cdc42se1-201, Transcript of CDC42 small effector protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc42se1, Length 2,805 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42se1-201ENSMUST00000053872 NischQ80TM9 1593 aa26.55■■□□□ 1.84
Cdc42se1-201ENSMUST00000053872 Gm35339A0A140LHH9 1649 aa26.48■■□□□ 1.83
Cdc42se1-201ENSMUST00000053872 Abcc9P70170 1546 aa25.79■■□□□ 1.72
Cdc42se1-201ENSMUST00000053872 Abcc8B2RUS7 1588 aa25.39■■□□□ 1.66
Cdc42se1-201ENSMUST00000053872 ScribQ80U72 1612 aa23.9■■□□□ 1.42
Cdc42se1-201ENSMUST00000053872 Rhox8Q6VSS7 320 aa23.88■■□□□ 1.41
Cdc42se1-201ENSMUST00000053872 Dcaf1Q80TR8 1506 aa23.7■■□□□ 1.38
Cdc42se1-201ENSMUST00000053872 Kdm5dQ62240 1548 aa23.35■■□□□ 1.33
Cdc42se1-201ENSMUST00000053872 Rtl1Q7M732 1744 aa23.3■■□□□ 1.32
Cdc42se1-201ENSMUST00000053872 NacadQ5SWP3 1504 aa23.3■■□□□ 1.32
Cdc42se1-201ENSMUST00000053872 Rb1cc1Q9ESK9 1588 aa23.22■■□□□ 1.31
Cdc42se1-201ENSMUST00000053872 Ccdc180J3QNE4 1664 aa23.12■■□□□ 1.29
Cdc42se1-201ENSMUST00000053872 Baz1aO88379 1555 aa22.97■■□□□ 1.27
Cdc42se1-201ENSMUST00000053872 Sycp2Q9CUU3 1500 aa22.8■■□□□ 1.24
Cdc42se1-201ENSMUST00000053872 Crybg2B7ZCC2 1516 aa22.77■■□□□ 1.24
Cdc42se1-201ENSMUST00000053872 Zcchc6Q5BLK4 1491 aaKnown RBP22.53■■□□□ 1.2
Cdc42se1-201ENSMUST00000053872 Smarca2Q6DIC0 1577 aa22.4■■□□□ 1.18
Cdc42se1-201ENSMUST00000053872 BicraF8VPZ9 1578 aa22.31■■□□□ 1.16
Cdc42se1-201ENSMUST00000053872 Ccdc136Q3TVA9 1136 aa22.18■■□□□ 1.14
Cdc42se1-201ENSMUST00000053872 Trim41Q5NCC3 630 aa21.93■■□□□ 1.1
Cdc42se1-201ENSMUST00000053872 Cecr2E9Q2Z1 1453 aa21.91■■□□□ 1.1
Cdc42se1-201ENSMUST00000053872 Brd4Q9ESU6 1400 aaKnown RBP21.84■■□□□ 1.09
Cdc42se1-201ENSMUST00000053872 HrcG5E8J6 738 aa21.71■■□□□ 1.07
Cdc42se1-201ENSMUST00000053872 Smarca4Q3TKT4 1613 aaKnown RBP21.7■■□□□ 1.06
Cdc42se1-201ENSMUST00000053872 Synj1Q8CHC4 1574 aa21.66■■□□□ 1.06
Cdc42se1-201ENSMUST00000053872 CftrP26361 1476 aa21.61■■□□□ 1.05
Cdc42se1-201ENSMUST00000053872 Cttnbp2B9EJA2 1648 aa21.56■■□□□ 1.04
Cdc42se1-201ENSMUST00000053872 Pds5bQ4VA53 1446 aaKnown RBP21.51■■□□□ 1.03
Cdc42se1-201ENSMUST00000053872 Atad2bE9Q166 1460 aaKnown RBP21.5■■□□□ 1.03
Cdc42se1-201ENSMUST00000053872 Iqgap2Q3UQ44 1575 aa21.44■■□□□ 1.02
Cdc42se1-201ENSMUST00000053872 Golga3P55937 1487 aa21.41■■□□□ 1.02
Cdc42se1-201ENSMUST00000053872 Esf1Q3V1V3 845 aaKnown RBP21.3■■□□□ 1
Cdc42se1-201ENSMUST00000053872 Cngb1E1AZ71 1325 aa21.29■■□□□ 1
Cdc42se1-201ENSMUST00000053872 Top2bQ64511 1612 aa21.26■□□□□ 0.99
Cdc42se1-201ENSMUST00000053872 Cep164Q5DU05 1446 aa21.22■□□□□ 0.99
Cdc42se1-201ENSMUST00000053872 Rsf1E9PWW9 1441 aaKnown RBP21.12■□□□□ 0.97
Cdc42se1-201ENSMUST00000053872 Wdr62Q3U3T8 1523 aa21.1■□□□□ 0.97
Cdc42se1-201ENSMUST00000053872 Ercc6F8VPZ5 1481 aa21.07■□□□□ 0.96
Cdc42se1-201ENSMUST00000053872 Frmpd1A2AKB4 1549 aa21.07■□□□□ 0.96
Cdc42se1-201ENSMUST00000053872 Ccdc88bQ4QRL3 1481 aa21.06■□□□□ 0.96
Cdc42se1-201ENSMUST00000053872 Chic1Q8CBW7 227 aa21.04■□□□□ 0.96
Cdc42se1-201ENSMUST00000053872 Cc2d2aQ8CFW7 1633 aa20.99■□□□□ 0.95
Cdc42se1-201ENSMUST00000053872 Fmn1Q05860 1466 aa20.97■□□□□ 0.95
Cdc42se1-201ENSMUST00000053872 Thoc2B1AZI6 1594 aaKnown RBP20.95■□□□□ 0.94
Cdc42se1-201ENSMUST00000053872 Unc13aQ4KUS2 1712 aa20.83■□□□□ 0.92
Cdc42se1-201ENSMUST00000053872 TnnQ80Z71 1560 aa20.81■□□□□ 0.92
Cdc42se1-201ENSMUST00000053872 Lamc3Q9R0B6 1581 aa20.77■□□□□ 0.92
Cdc42se1-201ENSMUST00000053872 Top2aQ01320 1528 aaKnown RBP20.76■□□□□ 0.91
Cdc42se1-201ENSMUST00000053872 Phldb1Q6PDH0 1371 aaKnown RBP20.75■□□□□ 0.91
Cdc42se1-201ENSMUST00000053872 Gab3Q8BSM5 595 aa20.69■□□□□ 0.9
Cdc42se1-201ENSMUST00000053872 Fam135aQ6NS59 1506 aa20.68■□□□□ 0.9
Cdc42se1-201ENSMUST00000053872 Kif15Q6P9L6 1387 aa20.64■□□□□ 0.89
Cdc42se1-201ENSMUST00000053872 Rapgef2Q8CHG7 1496 aa20.55■□□□□ 0.88
Cdc42se1-201ENSMUST00000053872 Ubl4bQ9CQ84 188 aa20.51■□□□□ 0.87
Cdc42se1-201ENSMUST00000053872 Camsap1A2AHC3 1581 aa20.49■□□□□ 0.87
Cdc42se1-201ENSMUST00000053872 Baz1bQ9Z277 1479 aa20.48■□□□□ 0.87
Cdc42se1-201ENSMUST00000053872 Ccdc18Q640L5 1455 aa20.45■□□□□ 0.86
Cdc42se1-201ENSMUST00000053872 Cux2P70298 1426 aa20.41■□□□□ 0.86
Cdc42se1-201ENSMUST00000053872 Cep162Q6ZQ06 1403 aa20.37■□□□□ 0.85
Cdc42se1-201ENSMUST00000053872 NrkQ9R0G8 1455 aa20.35■□□□□ 0.85
Cdc42se1-201ENSMUST00000053872 Il27Q8K3I6 234 aa20.34■□□□□ 0.85
Cdc42se1-201ENSMUST00000053872 Grin2bQ01097 1482 aa20.31■□□□□ 0.84
Cdc42se1-201ENSMUST00000053872 Ehmt2Q9Z148 1263 aaKnown RBP20.31■□□□□ 0.84
Cdc42se1-201ENSMUST00000053872 Eif4g1Q6NZJ6 1600 aaKnown RBP20.31■□□□□ 0.84
Cdc42se1-201ENSMUST00000053872 Npm2Q80W85 207 aa20.3■□□□□ 0.84
Cdc42se1-201ENSMUST00000053872 Npm1Q61937 292 aaKnown RBP20.29■□□□□ 0.84
Cdc42se1-201ENSMUST00000053872 Shroom4Q1W617 1475 aa20.29■□□□□ 0.84
Cdc42se1-201ENSMUST00000053872 Dnajc5bQ9CQ94 199 aa20.26■□□□□ 0.83
Cdc42se1-201ENSMUST00000053872 PtprkP35822 1457 aa20.26■□□□□ 0.83
Cdc42se1-201ENSMUST00000053872 Rpgrip1Q9EPQ2 1331 aa20.21■□□□□ 0.83
Cdc42se1-201ENSMUST00000053872 LrpprcQ6PB66 1392 aaKnown RBP20.2■□□□□ 0.82
Cdc42se1-201ENSMUST00000053872 Mrc2Q64449 1479 aa20.2■□□□□ 0.82
Cdc42se1-201ENSMUST00000053872 Arhgap35Q91YM2 1499 aa20.18■□□□□ 0.82
Cdc42se1-201ENSMUST00000053872 Acin1Q9JIX8 1338 aaKnown RBP20.18■□□□□ 0.82
Cdc42se1-201ENSMUST00000053872 PogzQ8BZH4 1409 aaKnown RBP20.15■□□□□ 0.82
Cdc42se1-201ENSMUST00000053872 Efcab5A0JP43 1406 aa20.15■□□□□ 0.82
Cdc42se1-201ENSMUST00000053872 Map3k1P53349 1493 aa20.13■□□□□ 0.81
Cdc42se1-201ENSMUST00000053872 Myt1lP97500 1187 aa20.12■□□□□ 0.81
Cdc42se1-201ENSMUST00000053872 Duox2A2AQ99 1517 aa20.08■□□□□ 0.81
Cdc42se1-201ENSMUST00000053872 Mroh2bQ7M6Y6 1581 aa20.07■□□□□ 0.8
Cdc42se1-201ENSMUST00000053872 Dhx29Q6PGC1 1365 aaKnown RBP20.05■□□□□ 0.8
Cdc42se1-201ENSMUST00000053872 Kif21aQ9QXL2 1672 aa20.03■□□□□ 0.8
Cdc42se1-201ENSMUST00000053872 AqrQ8CFQ3 1481 aaKnown RBP19.99■□□□□ 0.79
Cdc42se1-201ENSMUST00000053872 Clip1Q922J3 1391 aa19.98■□□□□ 0.79
Cdc42se1-201ENSMUST00000053872 Crocc2F6XLV1 1638 aa19.97■□□□□ 0.79
Cdc42se1-201ENSMUST00000053872 Zeb1Q64318 1117 aa19.96■□□□□ 0.79
Cdc42se1-201ENSMUST00000053872 Samd9lQ69Z37 1561 aa19.92■□□□□ 0.78
Cdc42se1-201ENSMUST00000053872 Eea1Q8BL66 1411 aa19.89■□□□□ 0.77
Cdc42se1-201ENSMUST00000053872 Carmil1Q6EDY6 1374 aa19.88■□□□□ 0.77
Cdc42se1-201ENSMUST00000053872 SynmQ70IV5 1561 aa19.88■□□□□ 0.77
Cdc42se1-201ENSMUST00000053872 Setd5Q5XJV7 1441 aa19.81■□□□□ 0.76
Cdc42se1-201ENSMUST00000053872 Erich3F6QRE9 1637 aa19.8■□□□□ 0.76
Cdc42se1-201ENSMUST00000053872 Plb1Q3TTY0 1478 aa19.8■□□□□ 0.76
Cdc42se1-201ENSMUST00000053872 Ankrd26Q811D2 1581 aa19.78■□□□□ 0.76
Cdc42se1-201ENSMUST00000053872 Arap1Q4LDD4 1452 aa19.78■□□□□ 0.76
Cdc42se1-201ENSMUST00000053872 Rad54l2Q99NG0 1466 aa19.78■□□□□ 0.76
Cdc42se1-201ENSMUST00000053872 Urb2E9Q7L1 1524 aaKnown RBP19.77■□□□□ 0.76
Cdc42se1-201ENSMUST00000053872 Arhgef5E9Q7D5 1581 aa19.76■□□□□ 0.75
Cdc42se1-201ENSMUST00000053872 Polr1aO35134 1717 aaKnown RBP19.75■□□□□ 0.75
Cdc42se1-201ENSMUST00000053872 Rpap1Q80TE0 1409 aa19.71■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms