RNA–Protein interactions for RNA: ENSMUST00000053286.8

Ccdc84-201, Transcript of Coiled-coil domain-containing protein 84, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc84, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84-201ENSMUST00000053286 Gm35339A0A140LHH9 1649 aa42.63■■■■■ 4.41
Ccdc84-201ENSMUST00000053286 NischQ80TM9 1593 aa42.34■■■■■ 4.37
Ccdc84-201ENSMUST00000053286 Abcc9P70170 1546 aa41.02■■■■■ 4.16
Ccdc84-201ENSMUST00000053286 Abcc8B2RUS7 1588 aa40.79■■■■■ 4.12
Ccdc84-201ENSMUST00000053286 ScribQ80U72 1612 aa39.04■■■■□ 3.84
Ccdc84-201ENSMUST00000053286 Kdm5dQ62240 1548 aa37.89■■■■□ 3.66
Ccdc84-201ENSMUST00000053286 NacadQ5SWP3 1504 aa37.88■■■■□ 3.65
Ccdc84-201ENSMUST00000053286 Dcaf1Q80TR8 1506 aa37.65■■■■□ 3.62
Ccdc84-201ENSMUST00000053286 Rhox8Q6VSS7 320 aa37.15■■■■□ 3.54
Ccdc84-201ENSMUST00000053286 Sycp2Q9CUU3 1500 aa37.12■■■■□ 3.53
Ccdc84-201ENSMUST00000053286 Rb1cc1Q9ESK9 1588 aa36.95■■■■□ 3.51
Ccdc84-201ENSMUST00000053286 BicraF8VPZ9 1578 aa36.52■■■■□ 3.44
Ccdc84-201ENSMUST00000053286 Baz1aO88379 1555 aa36.45■■■■□ 3.43
Ccdc84-201ENSMUST00000053286 Ccdc180J3QNE4 1664 aa36.42■■■■□ 3.42
Ccdc84-201ENSMUST00000053286 Crybg2B7ZCC2 1516 aa36.2■■■■□ 3.39
Ccdc84-201ENSMUST00000053286 Zcchc6Q5BLK4 1491 aaKnown RBP35.89■■■■□ 3.34
Ccdc84-201ENSMUST00000053286 Smarca2Q6DIC0 1577 aa35.43■■■■□ 3.26
Ccdc84-201ENSMUST00000053286 Pds5bQ4VA53 1446 aaKnown RBP35.41■■■■□ 3.26
Ccdc84-201ENSMUST00000053286 Rtl1Q7M732 1744 aa35.23■■■■□ 3.23
Ccdc84-201ENSMUST00000053286 Atad2bE9Q166 1460 aaKnown RBP35.17■■■■□ 3.22
Ccdc84-201ENSMUST00000053286 Cecr2E9Q2Z1 1453 aa35.17■■■■□ 3.22
Ccdc84-201ENSMUST00000053286 Smarca4Q3TKT4 1613 aaKnown RBP35.07■■■■□ 3.2
Ccdc84-201ENSMUST00000053286 Thoc2B1AZI6 1594 aaKnown RBP34.91■■■■□ 3.18
Ccdc84-201ENSMUST00000053286 Dnajc5bQ9CQ94 199 aa34.86■■■■□ 3.17
Ccdc84-201ENSMUST00000053286 Iqgap2Q3UQ44 1575 aa34.82■■■■□ 3.17
Ccdc84-201ENSMUST00000053286 Ercc6F8VPZ5 1481 aa34.69■■■■□ 3.14
Ccdc84-201ENSMUST00000053286 Ccdc136Q3TVA9 1136 aa34.69■■■■□ 3.14
Ccdc84-201ENSMUST00000053286 Brd4Q9ESU6 1400 aaKnown RBP34.48■■■■□ 3.11
Ccdc84-201ENSMUST00000053286 Wdr62Q3U3T8 1523 aa34.45■■■■□ 3.1
Ccdc84-201ENSMUST00000053286 CftrP26361 1476 aa34.44■■■■□ 3.1
Ccdc84-201ENSMUST00000053286 Synj1Q8CHC4 1574 aa34.42■■■■□ 3.1
Ccdc84-201ENSMUST00000053286 Frmpd1A2AKB4 1549 aa34.41■■■■□ 3.1
Ccdc84-201ENSMUST00000053286 Cc2d2aQ8CFW7 1633 aa34.4■■■■□ 3.1
Ccdc84-201ENSMUST00000053286 Cttnbp2B9EJA2 1648 aa34.36■■■■□ 3.09
Ccdc84-201ENSMUST00000053286 Fam135aQ6NS59 1506 aa34.22■■■■□ 3.07
Ccdc84-201ENSMUST00000053286 Trim41Q5NCC3 630 aa34.14■■■■□ 3.06
Ccdc84-201ENSMUST00000053286 Phldb1Q6PDH0 1371 aaKnown RBP34.1■■■■□ 3.05
Ccdc84-201ENSMUST00000053286 Esf1Q3V1V3 845 aaKnown RBP33.91■■■■□ 3.02
Ccdc84-201ENSMUST00000053286 Unc13aQ4KUS2 1712 aa33.91■■■■□ 3.02
Ccdc84-201ENSMUST00000053286 Ubl4bQ9CQ84 188 aa33.81■■■■□ 3
Ccdc84-201ENSMUST00000053286 Baz1bQ9Z277 1479 aa33.78■■■■□ 3
Ccdc84-201ENSMUST00000053286 Golga3P55937 1487 aa33.46■■■□□ 2.95
Ccdc84-201ENSMUST00000053286 Rsf1E9PWW9 1441 aaKnown RBP33.46■■■□□ 2.95
Ccdc84-201ENSMUST00000053286 Mrc2Q64449 1479 aa33.45■■■□□ 2.94
Ccdc84-201ENSMUST00000053286 Kif15Q6P9L6 1387 aa33.38■■■□□ 2.93
Ccdc84-201ENSMUST00000053286 Cngb1E1AZ71 1325 aa33.37■■■□□ 2.93
Ccdc84-201ENSMUST00000053286 Top2bQ64511 1612 aa33.33■■■□□ 2.93
Ccdc84-201ENSMUST00000053286 Lamc3Q9R0B6 1581 aa33.3■■■□□ 2.92
Ccdc84-201ENSMUST00000053286 Cux2P70298 1426 aa33.24■■■□□ 2.91
Ccdc84-201ENSMUST00000053286 TnnQ80Z71 1560 aa33.07■■■□□ 2.88
Ccdc84-201ENSMUST00000053286 Fmn1Q05860 1466 aa32.97■■■□□ 2.87
Ccdc84-201ENSMUST00000053286 Npm1Q61937 292 aaKnown RBP32.93■■■□□ 2.86
Ccdc84-201ENSMUST00000053286 Kif21aQ9QXL2 1672 aa32.84■■■□□ 2.85
Ccdc84-201ENSMUST00000053286 Cep164Q5DU05 1446 aa32.83■■■□□ 2.85
Ccdc84-201ENSMUST00000053286 Ccdc18Q640L5 1455 aa32.83■■■□□ 2.85
Ccdc84-201ENSMUST00000053286 Il27Q8K3I6 234 aa32.8■■■□□ 2.84
Ccdc84-201ENSMUST00000053286 Camsap1A2AHC3 1581 aa32.77■■■□□ 2.84
Ccdc84-201ENSMUST00000053286 Ccdc88bQ4QRL3 1481 aa32.71■■■□□ 2.83
Ccdc84-201ENSMUST00000053286 Lrriq1Q0P5X1 1673 aa32.67■■■□□ 2.82
Ccdc84-201ENSMUST00000053286 LrpprcQ6PB66 1392 aaKnown RBP32.6■■■□□ 2.81
Ccdc84-201ENSMUST00000053286 Dhx29Q6PGC1 1365 aaKnown RBP32.58■■■□□ 2.81
Ccdc84-201ENSMUST00000053286 Chic1Q8CBW7 227 aa32.55■■■□□ 2.8
Ccdc84-201ENSMUST00000053286 Top2aQ01320 1528 aaKnown RBP32.44■■■□□ 2.78
Ccdc84-201ENSMUST00000053286 PogzQ8BZH4 1409 aaKnown RBP32.43■■■□□ 2.78
Ccdc84-201ENSMUST00000053286 Crocc2F6XLV1 1638 aa32.4■■■□□ 2.78
Ccdc84-201ENSMUST00000053286 Grin2bQ01097 1482 aa32.39■■■□□ 2.78
Ccdc84-201ENSMUST00000053286 Urb2E9Q7L1 1524 aaKnown RBP32.38■■■□□ 2.77
Ccdc84-201ENSMUST00000053286 Plb1Q3TTY0 1478 aa32.36■■■□□ 2.77
Ccdc84-201ENSMUST00000053286 HrcG5E8J6 738 aa32.34■■■□□ 2.77
Ccdc84-201ENSMUST00000053286 Duox2A2AQ99 1517 aa32.3■■■□□ 2.76
Ccdc84-201ENSMUST00000053286 Eif4g3Q80XI3 1579 aaKnown RBP32.21■■■□□ 2.75
Ccdc84-201ENSMUST00000053286 NrkQ9R0G8 1455 aa32.14■■■□□ 2.74
Ccdc84-201ENSMUST00000053286 Efcab5A0JP43 1406 aa32.13■■■□□ 2.73
Ccdc84-201ENSMUST00000053286 Ift140E9PY46 1464 aa32.09■■■□□ 2.73
Ccdc84-201ENSMUST00000053286 Samd9lQ69Z37 1561 aa32.05■■■□□ 2.72
Ccdc84-201ENSMUST00000053286 PtprkP35822 1457 aa32.03■■■□□ 2.72
Ccdc84-201ENSMUST00000053286 Shroom4Q1W617 1475 aa32.02■■■□□ 2.72
Ccdc84-201ENSMUST00000053286 Disp1Q3TDN0 1521 aa31.95■■■□□ 2.71
Ccdc84-201ENSMUST00000053286 Gab3Q8BSM5 595 aa31.86■■■□□ 2.69
Ccdc84-201ENSMUST00000053286 Rusc2Q80U22 1514 aa31.86■■■□□ 2.69
Ccdc84-201ENSMUST00000053286 Rad54l2Q99NG0 1466 aa31.86■■■□□ 2.69
Ccdc84-201ENSMUST00000053286 Npm2Q80W85 207 aa31.8■■■□□ 2.68
Ccdc84-201ENSMUST00000053286 Nup160Q9Z0W3 1402 aaKnown RBP31.78■■■□□ 2.68
Ccdc84-201ENSMUST00000053286 Pbrm1Q8BSQ9 1634 aaKnown RBP31.78■■■□□ 2.68
Ccdc84-201ENSMUST00000053286 Magi3Q9EQJ9 1476 aa31.73■■■□□ 2.67
Ccdc84-201ENSMUST00000053286 Zeb1Q64318 1117 aa31.72■■■□□ 2.67
Ccdc84-201ENSMUST00000053286 Grin2aP35436 1464 aa31.72■■■□□ 2.67
Ccdc84-201ENSMUST00000053286 SynmQ70IV5 1561 aa31.71■■■□□ 2.67
Ccdc84-201ENSMUST00000053286 Cc2d2bA0A286YDU8 1405 aa31.7■■■□□ 2.66
Ccdc84-201ENSMUST00000053286 Setd1bQ8CFT2 1985 aa31.68■■■□□ 2.66
Ccdc84-201ENSMUST00000053286 Rapgef2Q8CHG7 1496 aa31.66■■■□□ 2.66
Ccdc84-201ENSMUST00000053286 Mroh2bQ7M6Y6 1581 aa31.62■■■□□ 2.65
Ccdc84-201ENSMUST00000053286 Pla2r1Q62028 1487 aa31.6■■■□□ 2.65
Ccdc84-201ENSMUST00000053286 AqrQ8CFQ3 1481 aaKnown RBP31.52■■■□□ 2.64
Ccdc84-201ENSMUST00000053286 Shroom2A2ALU4 1481 aa31.52■■■□□ 2.64
Ccdc84-201ENSMUST00000053286 Arhgap35Q91YM2 1499 aa31.51■■■□□ 2.63
Ccdc84-201ENSMUST00000053286 Gpatch8A2A6A1 1505 aa31.49■■■□□ 2.63
Ccdc84-201ENSMUST00000053286 Cep162Q6ZQ06 1403 aa31.47■■■□□ 2.63
Ccdc84-201ENSMUST00000053286 Map3k1P53349 1493 aa31.43■■■□□ 2.62
Ccdc84-201ENSMUST00000053286 Eif4g1Q6NZJ6 1600 aaKnown RBP31.42■■■□□ 2.62
Retrieved 100 of 22,080 RNA–protein pairs in 147 ms