RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Rpgrip1Q9EPQ2 1331 aa18.3■□□□□ 0.52
Nipbl-201ENSMUST00000052965 Rhox8Q6VSS7 320 aa18.09■□□□□ 0.49
Nipbl-201ENSMUST00000052965 Las1lA2BE28 776 aaKnown RBP17.64■□□□□ 0.41
Nipbl-201ENSMUST00000052965 Cngb1E1AZ71 1325 aa17.46■□□□□ 0.39
Nipbl-201ENSMUST00000052965 Pelp1Q9DBD5 1123 aaKnown RBP17■□□□□ 0.31
Nipbl-201ENSMUST00000052965 Rtl1Q7M732 1744 aa16.88■□□□□ 0.29
Nipbl-201ENSMUST00000052965 Myt1Q8CFC2 1127 aa16.72■□□□□ 0.27
Nipbl-201ENSMUST00000052965 CenpbP27790 599 aa16.6■□□□□ 0.25
Nipbl-201ENSMUST00000052965 Ehmt2Q9Z148 1263 aaKnown RBP16.59■□□□□ 0.25
Nipbl-201ENSMUST00000052965 Ccdc180J3QNE4 1664 aa16.57■□□□□ 0.24
Nipbl-201ENSMUST00000052965 NischQ80TM9 1593 aa16.53■□□□□ 0.24
Nipbl-201ENSMUST00000052965 Acin1Q9JIX8 1338 aaKnown RBP16.52■□□□□ 0.23
Nipbl-201ENSMUST00000052965 Wdr66E9Q743 1299 aa16.4■□□□□ 0.22
Nipbl-201ENSMUST00000052965 Zeb1Q64318 1117 aa16.35■□□□□ 0.21
Nipbl-201ENSMUST00000052965 Amer1Q7TS75 1132 aa16.21■□□□□ 0.19
Nipbl-201ENSMUST00000052965 NefmP08553 848 aa16.11■□□□□ 0.17
Nipbl-201ENSMUST00000052965 Ccdc136Q3TVA9 1136 aa16.08■□□□□ 0.17
Nipbl-201ENSMUST00000052965 Stra8P70278 393 aa16.08■□□□□ 0.16
Nipbl-201ENSMUST00000052965 Pcgf6Q99NA9 353 aa16.05■□□□□ 0.16
Nipbl-201ENSMUST00000052965 Trim41Q5NCC3 630 aa15.99■□□□□ 0.15
Nipbl-201ENSMUST00000052965 Esf1Q3V1V3 845 aaKnown RBP15.98■□□□□ 0.15
Nipbl-201ENSMUST00000052965 DiexfQ8BTT6 772 aaKnown RBP15.87■□□□□ 0.13
Nipbl-201ENSMUST00000052965 Cdk11bP24788 784 aaKnown RBP15.83■□□□□ 0.12
Nipbl-201ENSMUST00000052965 Rtl5Q5DTT4 599 aa15.82■□□□□ 0.12
Nipbl-201ENSMUST00000052965 Tnnt3Q9QZ47 272 aa15.81■□□□□ 0.12
Nipbl-201ENSMUST00000052965 4930567H17RikQ3V0K5 233 aa15.72■□□□□ 0.11
Nipbl-201ENSMUST00000052965 Gab3Q8BSM5 595 aa15.69■□□□□ 0.1
Nipbl-201ENSMUST00000052965 Ube2uB1AUC4 352 aa15.68■□□□□ 0.1
Nipbl-201ENSMUST00000052965 Npm2Q80W85 207 aa15.67■□□□□ 0.1
Nipbl-201ENSMUST00000052965 Ttbk1Q6PCN3 1308 aa15.65■□□□□ 0.1
Nipbl-201ENSMUST00000052965 Nop58Q6DFW4 536 aaKnown RBP15.58■□□□□ 0.08
Nipbl-201ENSMUST00000052965 HrcG5E8J6 738 aa15.56■□□□□ 0.08
Nipbl-201ENSMUST00000052965 4933416C03RikQ3V063 378 aa15.53■□□□□ 0.08
Nipbl-201ENSMUST00000052965 Supt5hO55201 1082 aaKnown RBP15.5■□□□□ 0.07
Nipbl-201ENSMUST00000052965 Myt1lP97500 1187 aa15.48■□□□□ 0.07
Nipbl-201ENSMUST00000052965 Abcc9P70170 1546 aa15.43■□□□□ 0.06
Nipbl-201ENSMUST00000052965 UbtfP25976 765 aaKnown RBP15.34■□□□□ 0.05
Nipbl-201ENSMUST00000052965 Slc24a1Q91WD8 1130 aa15.29■□□□□ 0.04
Nipbl-201ENSMUST00000052965 NeflP08551 543 aa15.28■□□□□ 0.04
Nipbl-201ENSMUST00000052965 Anp32aO35381 247 aa15.27■□□□□ 0.04
Nipbl-201ENSMUST00000052965 Aplp2Q06335 707 aa15.23■□□□□ 0.03
Nipbl-201ENSMUST00000052965 Anks4bQ8K3X6 423 aa15.22■□□□□ 0.03
Nipbl-201ENSMUST00000052965 Neurod1Q60867 357 aa15.22■□□□□ 0.03
Nipbl-201ENSMUST00000052965 NrdcQ8BHG1 1161 aa15.18■□□□□ 0.02
Nipbl-201ENSMUST00000052965 ClspnQ80YR7 1315 aa15.15■□□□□ 0.02
Nipbl-201ENSMUST00000052965 Dcaf1Q80TR8 1506 aa15.13■□□□□ 0.01
Nipbl-201ENSMUST00000052965 TonslQ6NZL6 1363 aa15.13■□□□□ 0.01
Nipbl-201ENSMUST00000052965 Zcchc6Q5BLK4 1491 aaKnown RBP15.09■□□□□ 0.01
Nipbl-201ENSMUST00000052965 Ccdc9Q8VC31 543 aaKnown RBP15.07■□□□□ 0
Nipbl-201ENSMUST00000052965 Anp32bQ9EST5 272 aaKnown RBP15.07■□□□□ 0
Nipbl-201ENSMUST00000052965 Csrnp3P59055 597 aa15.04■□□□□ -0
Nipbl-201ENSMUST00000052965 NclP09405 707 aaKnown RBP15.02□□□□□ -0.01
Nipbl-201ENSMUST00000052965 Eif5bQ05D44 1216 aaKnown RBP14.97□□□□□ -0.01
Nipbl-201ENSMUST00000052965 DaxxO35613 739 aa14.96□□□□□ -0.01
Nipbl-201ENSMUST00000052965 Gm35339A0A140LHH9 1649 aa14.95□□□□□ -0.02
Nipbl-201ENSMUST00000052965 Abcc8B2RUS7 1588 aa14.94□□□□□ -0.02
Nipbl-201ENSMUST00000052965 Mier1Q5UAK0 511 aa14.92□□□□□ -0.02
Nipbl-201ENSMUST00000052965 Ythdc1E9Q5K9 736 aaKnown RBP14.85□□□□□ -0.03
Nipbl-201ENSMUST00000052965 Fam50aQ9WV03 339 aaKnown RBP14.81□□□□□ -0.04
Nipbl-201ENSMUST00000052965 Il27Q8K3I6 234 aa14.79□□□□□ -0.04
Nipbl-201ENSMUST00000052965 Ppargc1bQ8VHJ7 1014 aa14.79□□□□□ -0.04
Nipbl-201ENSMUST00000052965 1700123L14RikQ3V2K7 440 aa14.77□□□□□ -0.04
Nipbl-201ENSMUST00000052965 Bcl11aQ9QYE3 773 aa14.77□□□□□ -0.05
Nipbl-201ENSMUST00000052965 Hsp90aa1P07901 733 aaKnown RBP14.71□□□□□ -0.05
Nipbl-201ENSMUST00000052965 Sall2Q9QX96 1004 aa14.71□□□□□ -0.05
Nipbl-201ENSMUST00000052965 Rb1cc1Q9ESK9 1588 aa14.7□□□□□ -0.06
Nipbl-201ENSMUST00000052965 Gm38655A0A286YDK6 273 aa14.67□□□□□ -0.06
Nipbl-201ENSMUST00000052965 Ap3b1Q9Z1T1 1105 aa14.67□□□□□ -0.06
Nipbl-201ENSMUST00000052965 Calr4Q3TQS0 420 aa14.65□□□□□ -0.06
Nipbl-201ENSMUST00000052965 Brd4Q9ESU6 1400 aaKnown RBP14.59□□□□□ -0.07
Nipbl-201ENSMUST00000052965 Cep164Q5DU05 1446 aa14.58□□□□□ -0.08
Nipbl-201ENSMUST00000052965 Fam71e1A1L3C1 212 aa14.56□□□□□ -0.08
Nipbl-201ENSMUST00000052965 Wdr43Q6ZQL4 677 aaKnown RBP14.56□□□□□ -0.08
Nipbl-201ENSMUST00000052965 Ppp4r2Q0VGB7 417 aa14.54□□□□□ -0.08
Nipbl-201ENSMUST00000052965 Ccdc27Q3V036 639 aa14.54□□□□□ -0.08
Nipbl-201ENSMUST00000052965 Os9Q8K2C7 672 aa14.51□□□□□ -0.09
Nipbl-201ENSMUST00000052965 Upf2A2AT37 1269 aaKnown RBP14.47□□□□□ -0.09
Nipbl-201ENSMUST00000052965 Irx3P81067 507 aa14.43□□□□□ -0.1
Nipbl-201ENSMUST00000052965 Plekhg3Q4VAC9 1341 aa14.38□□□□□ -0.11
Nipbl-201ENSMUST00000052965 Mapk8ip2Q9ERE9 830 aa14.37□□□□□ -0.11
Nipbl-201ENSMUST00000052965 Trim44Q9QXA7 346 aa14.36□□□□□ -0.11
Nipbl-201ENSMUST00000052965 Npm1Q61937 292 aaKnown RBP14.35□□□□□ -0.11
Nipbl-201ENSMUST00000052965 CatipB9EKE5 520 aa14.34□□□□□ -0.11
Nipbl-201ENSMUST00000052965 Hdac5Q9Z2V6 1113 aa14.32□□□□□ -0.12
Nipbl-201ENSMUST00000052965 Clip1Q922J3 1391 aa14.31□□□□□ -0.12
Nipbl-201ENSMUST00000052965 Ccer2J3QPU5 274 aa14.3□□□□□ -0.12
Nipbl-201ENSMUST00000052965 Baz1aO88379 1555 aa14.28□□□□□ -0.12
Nipbl-201ENSMUST00000052965 Htatsf1Q8BGC0 757 aa14.26□□□□□ -0.13
Nipbl-201ENSMUST00000052965 Lmod2Q3UHZ5 550 aa14.24□□□□□ -0.13
Nipbl-201ENSMUST00000052965 CanxP35564 591 aaKnown RBP14.22□□□□□ -0.13
Nipbl-201ENSMUST00000052965 Lmod3E9QA62 571 aa14.2□□□□□ -0.14
Nipbl-201ENSMUST00000052965 AU015836B2RUM3 263 aa14.2□□□□□ -0.14
Nipbl-201ENSMUST00000052965 ArxO35085 564 aa14.19□□□□□ -0.14
Nipbl-201ENSMUST00000052965 NacadQ5SWP3 1504 aa14.18□□□□□ -0.14
Nipbl-201ENSMUST00000052965 Tnnt2P50752 301 aa14.16□□□□□ -0.14
Nipbl-201ENSMUST00000052965 Nlrp6Q91WS2 869 aa14.16□□□□□ -0.14
Nipbl-201ENSMUST00000052965 DekQ7TNV0 380 aaKnown RBP14.15□□□□□ -0.14
Nipbl-201ENSMUST00000052965 Eid3Q3V124 375 aa14.14□□□□□ -0.15
Nipbl-201ENSMUST00000052965 Hnrnpul2Q00PI9 745 aaKnown RBP14.12□□□□□ -0.15
Nipbl-201ENSMUST00000052965 Ppm1gQ61074 542 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms