RNA–Protein interactions for RNA: ENSMUST00000047362.10

Rccd1-201, Transcript of RCC1 domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rccd1, Length 3,336 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rccd1-201ENSMUST00000047362 NischQ80TM9 1593 aa23.46■■□□□ 1.35
Rccd1-201ENSMUST00000047362 Abcc9P70170 1546 aa22.74■■□□□ 1.23
Rccd1-201ENSMUST00000047362 Gm35339A0A140LHH9 1649 aa22.7■■□□□ 1.22
Rccd1-201ENSMUST00000047362 Rhox8Q6VSS7 320 aa22.36■■□□□ 1.17
Rccd1-201ENSMUST00000047362 Abcc8B2RUS7 1588 aa22.16■■□□□ 1.14
Rccd1-201ENSMUST00000047362 Rtl1Q7M732 1744 aa21.89■■□□□ 1.09
Rccd1-201ENSMUST00000047362 Ccdc180J3QNE4 1664 aa21.67■■□□□ 1.06
Rccd1-201ENSMUST00000047362 Ehmt2Q9Z148 1263 aaKnown RBP21.35■■□□□ 1.01
Rccd1-201ENSMUST00000047362 Rpgrip1Q9EPQ2 1331 aa21.23■□□□□ 0.99
Rccd1-201ENSMUST00000047362 Zcchc6Q5BLK4 1491 aaKnown RBP21.2■□□□□ 0.98
Rccd1-201ENSMUST00000047362 Acin1Q9JIX8 1338 aaKnown RBP20.87■□□□□ 0.93
Rccd1-201ENSMUST00000047362 Pcgf6Q99NA9 353 aa20.81■□□□□ 0.92
Rccd1-201ENSMUST00000047362 Ccdc136Q3TVA9 1136 aa20.73■□□□□ 0.91
Rccd1-201ENSMUST00000047362 HrcG5E8J6 738 aa20.72■□□□□ 0.91
Rccd1-201ENSMUST00000047362 Dcaf1Q80TR8 1506 aa20.6■□□□□ 0.89
Rccd1-201ENSMUST00000047362 Rb1cc1Q9ESK9 1588 aa20.57■□□□□ 0.88
Rccd1-201ENSMUST00000047362 ScribQ80U72 1612 aa20.5■□□□□ 0.87
Rccd1-201ENSMUST00000047362 Trim41Q5NCC3 630 aa20.35■□□□□ 0.85
Rccd1-201ENSMUST00000047362 Supt5hO55201 1082 aaKnown RBP20.31■□□□□ 0.84
Rccd1-201ENSMUST00000047362 Baz1aO88379 1555 aa20.3■□□□□ 0.84
Rccd1-201ENSMUST00000047362 Kdm5dQ62240 1548 aa20.21■□□□□ 0.83
Rccd1-201ENSMUST00000047362 Neurod1Q60867 357 aa20.17■□□□□ 0.82
Rccd1-201ENSMUST00000047362 Zeb1Q64318 1117 aa20.02■□□□□ 0.79
Rccd1-201ENSMUST00000047362 Cep164Q5DU05 1446 aa19.98■□□□□ 0.79
Rccd1-201ENSMUST00000047362 NacadQ5SWP3 1504 aa19.95■□□□□ 0.78
Rccd1-201ENSMUST00000047362 Smarca2Q6DIC0 1577 aa19.88■□□□□ 0.77
Rccd1-201ENSMUST00000047362 Las1lA2BE28 776 aaKnown RBP19.84■□□□□ 0.77
Rccd1-201ENSMUST00000047362 Chic1Q8CBW7 227 aa19.78■□□□□ 0.76
Rccd1-201ENSMUST00000047362 Gab3Q8BSM5 595 aa19.77■□□□□ 0.75
Rccd1-201ENSMUST00000047362 Crybg2B7ZCC2 1516 aa19.76■□□□□ 0.75
Rccd1-201ENSMUST00000047362 Cngb1E1AZ71 1325 aa19.76■□□□□ 0.75
Rccd1-201ENSMUST00000047362 Rsf1E9PWW9 1441 aaKnown RBP19.7■□□□□ 0.74
Rccd1-201ENSMUST00000047362 1700123L14RikQ3V2K7 440 aa19.67■□□□□ 0.74
Rccd1-201ENSMUST00000047362 Csrnp3P59055 597 aa19.66■□□□□ 0.74
Rccd1-201ENSMUST00000047362 Gm38655A0A286YDK6 273 aa19.56■□□□□ 0.72
Rccd1-201ENSMUST00000047362 Ccdc88bQ4QRL3 1481 aa19.53■□□□□ 0.72
Rccd1-201ENSMUST00000047362 Sycp2Q9CUU3 1500 aa19.52■□□□□ 0.72
Rccd1-201ENSMUST00000047362 Mier1Q5UAK0 511 aa19.5■□□□□ 0.71
Rccd1-201ENSMUST00000047362 Brd4Q9ESU6 1400 aaKnown RBP19.47■□□□□ 0.71
Rccd1-201ENSMUST00000047362 Cecr2E9Q2Z1 1453 aa19.46■□□□□ 0.71
Rccd1-201ENSMUST00000047362 Ppargc1bQ8VHJ7 1014 aa19.45■□□□□ 0.7
Rccd1-201ENSMUST00000047362 CenpbP27790 599 aa19.44■□□□□ 0.7
Rccd1-201ENSMUST00000047362 NefmP08553 848 aa19.43■□□□□ 0.7
Rccd1-201ENSMUST00000047362 Golga3P55937 1487 aa19.41■□□□□ 0.7
Rccd1-201ENSMUST00000047362 Sall2Q9QX96 1004 aa19.41■□□□□ 0.7
Rccd1-201ENSMUST00000047362 Wdr66E9Q743 1299 aa19.36■□□□□ 0.69
Rccd1-201ENSMUST00000047362 Synj1Q8CHC4 1574 aa19.31■□□□□ 0.68
Rccd1-201ENSMUST00000047362 Esf1Q3V1V3 845 aaKnown RBP19.28■□□□□ 0.68
Rccd1-201ENSMUST00000047362 DiexfQ8BTT6 772 aaKnown RBP19.24■□□□□ 0.67
Rccd1-201ENSMUST00000047362 Anks4bQ8K3X6 423 aa19.19■□□□□ 0.66
Rccd1-201ENSMUST00000047362 UbtfP25976 765 aaKnown RBP19.15■□□□□ 0.66
Rccd1-201ENSMUST00000047362 CftrP26361 1476 aa19.14■□□□□ 0.65
Rccd1-201ENSMUST00000047362 BicraF8VPZ9 1578 aa19.08■□□□□ 0.65
Rccd1-201ENSMUST00000047362 Top2bQ64511 1612 aa19.06■□□□□ 0.64
Rccd1-201ENSMUST00000047362 Cdk11bP24788 784 aaKnown RBP19.03■□□□□ 0.64
Rccd1-201ENSMUST00000047362 Aebp2Q9Z248 504 aaKnown RBP19.03■□□□□ 0.64
Rccd1-201ENSMUST00000047362 Nop58Q6DFW4 536 aaKnown RBP18.99■□□□□ 0.63
Rccd1-201ENSMUST00000047362 Myt1Q8CFC2 1127 aa18.96■□□□□ 0.63
Rccd1-201ENSMUST00000047362 Cc2d2aQ8CFW7 1633 aa18.95■□□□□ 0.62
Rccd1-201ENSMUST00000047362 Myt1lP97500 1187 aa18.94■□□□□ 0.62
Rccd1-201ENSMUST00000047362 Rapgef2Q8CHG7 1496 aa18.93■□□□□ 0.62
Rccd1-201ENSMUST00000047362 Cttnbp2B9EJA2 1648 aa18.92■□□□□ 0.62
Rccd1-201ENSMUST00000047362 Bcl11aQ9QYE3 773 aa18.92■□□□□ 0.62
Rccd1-201ENSMUST00000047362 Aplp2Q06335 707 aa18.91■□□□□ 0.62
Rccd1-201ENSMUST00000047362 Mapk8ip2Q9ERE9 830 aa18.85■□□□□ 0.61
Rccd1-201ENSMUST00000047362 Cep162Q6ZQ06 1403 aa18.82■□□□□ 0.6
Rccd1-201ENSMUST00000047362 ClspnQ80YR7 1315 aa18.8■□□□□ 0.6
Rccd1-201ENSMUST00000047362 Fmn1Q05860 1466 aa18.78■□□□□ 0.6
Rccd1-201ENSMUST00000047362 Top2aQ01320 1528 aaKnown RBP18.76■□□□□ 0.59
Rccd1-201ENSMUST00000047362 Npm2Q80W85 207 aa18.75■□□□□ 0.59
Rccd1-201ENSMUST00000047362 Smarca4Q3TKT4 1613 aaKnown RBP18.74■□□□□ 0.59
Rccd1-201ENSMUST00000047362 Fam71e1A1L3C1 212 aa18.74■□□□□ 0.59
Rccd1-201ENSMUST00000047362 Plekhg3Q4VAC9 1341 aa18.73■□□□□ 0.59
Rccd1-201ENSMUST00000047362 TonslQ6NZL6 1363 aa18.71■□□□□ 0.59
Rccd1-201ENSMUST00000047362 SafbD3YXK2 937 aaKnown RBP18.68■□□□□ 0.58
Rccd1-201ENSMUST00000047362 Clip1Q922J3 1391 aa18.66■□□□□ 0.58
Rccd1-201ENSMUST00000047362 PrkcshO08795 521 aa18.65■□□□□ 0.58
Rccd1-201ENSMUST00000047362 Ifnlr1Q8CGK5 535 aa18.64■□□□□ 0.58
Rccd1-201ENSMUST00000047362 Ncapd3Q6ZQK0 1506 aa18.53■□□□□ 0.56
Rccd1-201ENSMUST00000047362 Ap3b1Q9Z1T1 1105 aa18.52■□□□□ 0.56
Rccd1-201ENSMUST00000047362 Eif4g1Q6NZJ6 1600 aaKnown RBP18.49■□□□□ 0.55
Rccd1-201ENSMUST00000047362 Ttbk1Q6PCN3 1308 aa18.49■□□□□ 0.55
Rccd1-201ENSMUST00000047362 Iqgap2Q3UQ44 1575 aa18.48■□□□□ 0.55
Rccd1-201ENSMUST00000047362 Hnrnpul2Q00PI9 745 aaKnown RBP18.47■□□□□ 0.55
Rccd1-201ENSMUST00000047362 Eid3Q3V124 375 aa18.45■□□□□ 0.54
Rccd1-201ENSMUST00000047362 Arhgap35Q91YM2 1499 aa18.39■□□□□ 0.53
Rccd1-201ENSMUST00000047362 PtprkP35822 1457 aa18.37■□□□□ 0.53
Rccd1-201ENSMUST00000047362 Arap1Q4LDD4 1452 aa18.35■□□□□ 0.53
Rccd1-201ENSMUST00000047362 Il27Q8K3I6 234 aa18.34■□□□□ 0.53
Rccd1-201ENSMUST00000047362 Eea1Q8BL66 1411 aa18.33■□□□□ 0.52
Rccd1-201ENSMUST00000047362 TnnQ80Z71 1560 aa18.29■□□□□ 0.52
Rccd1-201ENSMUST00000047362 Setd5Q5XJV7 1441 aa18.28■□□□□ 0.52
Rccd1-201ENSMUST00000047362 Atad2bE9Q166 1460 aaKnown RBP18.28■□□□□ 0.52
Rccd1-201ENSMUST00000047362 Kdm5bQ80Y84 1544 aa18.26■□□□□ 0.51
Rccd1-201ENSMUST00000047362 NrkQ9R0G8 1455 aa18.24■□□□□ 0.51
Rccd1-201ENSMUST00000047362 Arhgef5E9Q7D5 1581 aa18.23■□□□□ 0.51
Rccd1-201ENSMUST00000047362 Amer1Q7TS75 1132 aa18.2■□□□□ 0.5
Rccd1-201ENSMUST00000047362 Ccdc18Q640L5 1455 aa18.19■□□□□ 0.5
Rccd1-201ENSMUST00000047362 Slc24a1Q91WD8 1130 aa18.18■□□□□ 0.5
Rccd1-201ENSMUST00000047362 Shroom4Q1W617 1475 aa18.13■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms