RNA–Protein interactions for RNA: ENSMUST00000045956.13

Cchcr1-201, Transcript of Coiled-coil alpha-helical rod protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cchcr1, Length 2,748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1-201ENSMUST00000045956 NischQ80TM9 1593 aa27.28■■□□□ 1.96
Cchcr1-201ENSMUST00000045956 Gm35339A0A140LHH9 1649 aa26.73■■□□□ 1.87
Cchcr1-201ENSMUST00000045956 Abcc9P70170 1546 aa26.46■■□□□ 1.83
Cchcr1-201ENSMUST00000045956 Abcc8B2RUS7 1588 aa25.91■■□□□ 1.74
Cchcr1-201ENSMUST00000045956 Rhox8Q6VSS7 320 aa25.72■■□□□ 1.71
Cchcr1-201ENSMUST00000045956 Rtl1Q7M732 1744 aa25.41■■□□□ 1.66
Cchcr1-201ENSMUST00000045956 Ccdc180J3QNE4 1664 aa25.08■■□□□ 1.61
Cchcr1-201ENSMUST00000045956 Rpgrip1Q9EPQ2 1331 aa24.58■■□□□ 1.53
Cchcr1-201ENSMUST00000045956 Zcchc6Q5BLK4 1491 aaKnown RBP24.36■■□□□ 1.49
Cchcr1-201ENSMUST00000045956 ScribQ80U72 1612 aa24.16■■□□□ 1.46
Cchcr1-201ENSMUST00000045956 Dcaf1Q80TR8 1506 aa24.1■■□□□ 1.45
Cchcr1-201ENSMUST00000045956 Acin1Q9JIX8 1338 aaKnown RBP24.05■■□□□ 1.44
Cchcr1-201ENSMUST00000045956 HrcG5E8J6 738 aa23.9■■□□□ 1.42
Cchcr1-201ENSMUST00000045956 Ehmt2Q9Z148 1263 aaKnown RBP23.9■■□□□ 1.42
Cchcr1-201ENSMUST00000045956 Rb1cc1Q9ESK9 1588 aa23.9■■□□□ 1.42
Cchcr1-201ENSMUST00000045956 Ccdc136Q3TVA9 1136 aa23.8■■□□□ 1.4
Cchcr1-201ENSMUST00000045956 Kdm5dQ62240 1548 aa23.74■■□□□ 1.39
Cchcr1-201ENSMUST00000045956 Baz1aO88379 1555 aa23.6■■□□□ 1.37
Cchcr1-201ENSMUST00000045956 NacadQ5SWP3 1504 aa23.53■■□□□ 1.36
Cchcr1-201ENSMUST00000045956 Trim41Q5NCC3 630 aa23.41■■□□□ 1.34
Cchcr1-201ENSMUST00000045956 Pcgf6Q99NA9 353 aa23.32■■□□□ 1.32
Cchcr1-201ENSMUST00000045956 Crybg2B7ZCC2 1516 aa23.12■■□□□ 1.29
Cchcr1-201ENSMUST00000045956 Smarca2Q6DIC0 1577 aa23.06■■□□□ 1.28
Cchcr1-201ENSMUST00000045956 Cep164Q5DU05 1446 aa23.04■■□□□ 1.28
Cchcr1-201ENSMUST00000045956 Sycp2Q9CUU3 1500 aa23.03■■□□□ 1.28
Cchcr1-201ENSMUST00000045956 Supt5hO55201 1082 aaKnown RBP22.85■■□□□ 1.25
Cchcr1-201ENSMUST00000045956 Cngb1E1AZ71 1325 aa22.73■■□□□ 1.23
Cchcr1-201ENSMUST00000045956 Gab3Q8BSM5 595 aa22.69■■□□□ 1.22
Cchcr1-201ENSMUST00000045956 Chic1Q8CBW7 227 aa22.65■■□□□ 1.22
Cchcr1-201ENSMUST00000045956 Rsf1E9PWW9 1441 aaKnown RBP22.61■■□□□ 1.21
Cchcr1-201ENSMUST00000045956 Cecr2E9Q2Z1 1453 aa22.58■■□□□ 1.21
Cchcr1-201ENSMUST00000045956 Brd4Q9ESU6 1400 aaKnown RBP22.55■■□□□ 1.2
Cchcr1-201ENSMUST00000045956 Zeb1Q64318 1117 aa22.53■■□□□ 1.2
Cchcr1-201ENSMUST00000045956 BicraF8VPZ9 1578 aa22.52■■□□□ 1.2
Cchcr1-201ENSMUST00000045956 NefmP08553 848 aa22.46■■□□□ 1.19
Cchcr1-201ENSMUST00000045956 Mier1Q5UAK0 511 aa22.4■■□□□ 1.18
Cchcr1-201ENSMUST00000045956 Neurod1Q60867 357 aa22.4■■□□□ 1.18
Cchcr1-201ENSMUST00000045956 Ccdc88bQ4QRL3 1481 aa22.39■■□□□ 1.18
Cchcr1-201ENSMUST00000045956 Synj1Q8CHC4 1574 aa22.36■■□□□ 1.17
Cchcr1-201ENSMUST00000045956 Golga3P55937 1487 aa22.35■■□□□ 1.17
Cchcr1-201ENSMUST00000045956 CftrP26361 1476 aa22.23■■□□□ 1.15
Cchcr1-201ENSMUST00000045956 Esf1Q3V1V3 845 aaKnown RBP22.22■■□□□ 1.15
Cchcr1-201ENSMUST00000045956 Sall2Q9QX96 1004 aa22.17■■□□□ 1.14
Cchcr1-201ENSMUST00000045956 Cttnbp2B9EJA2 1648 aa22.06■■□□□ 1.12
Cchcr1-201ENSMUST00000045956 Las1lA2BE28 776 aaKnown RBP22.04■■□□□ 1.12
Cchcr1-201ENSMUST00000045956 Smarca4Q3TKT4 1613 aaKnown RBP22.02■■□□□ 1.12
Cchcr1-201ENSMUST00000045956 UbtfP25976 765 aaKnown RBP22.01■■□□□ 1.11
Cchcr1-201ENSMUST00000045956 Top2bQ64511 1612 aa21.99■■□□□ 1.11
Cchcr1-201ENSMUST00000045956 Wdr66E9Q743 1299 aa21.92■■□□□ 1.1
Cchcr1-201ENSMUST00000045956 Anks4bQ8K3X6 423 aa21.84■■□□□ 1.09
Cchcr1-201ENSMUST00000045956 Cc2d2aQ8CFW7 1633 aa21.82■■□□□ 1.08
Cchcr1-201ENSMUST00000045956 Aebp2Q9Z248 504 aaKnown RBP21.8■■□□□ 1.08
Cchcr1-201ENSMUST00000045956 Rapgef2Q8CHG7 1496 aa21.78■■□□□ 1.08
Cchcr1-201ENSMUST00000045956 Myt1lP97500 1187 aa21.78■■□□□ 1.08
Cchcr1-201ENSMUST00000045956 Iqgap2Q3UQ44 1575 aa21.74■■□□□ 1.07
Cchcr1-201ENSMUST00000045956 Fmn1Q05860 1466 aa21.71■■□□□ 1.07
Cchcr1-201ENSMUST00000045956 ClspnQ80YR7 1315 aa21.69■■□□□ 1.06
Cchcr1-201ENSMUST00000045956 Csrnp3P59055 597 aa21.68■■□□□ 1.06
Cchcr1-201ENSMUST00000045956 Cdk11bP24788 784 aaKnown RBP21.67■■□□□ 1.06
Cchcr1-201ENSMUST00000045956 Cep162Q6ZQ06 1403 aa21.64■■□□□ 1.06
Cchcr1-201ENSMUST00000045956 1700123L14RikQ3V2K7 440 aa21.64■■□□□ 1.05
Cchcr1-201ENSMUST00000045956 Atad2bE9Q166 1460 aaKnown RBP21.64■■□□□ 1.05
Cchcr1-201ENSMUST00000045956 Nop58Q6DFW4 536 aaKnown RBP21.64■■□□□ 1.05
Cchcr1-201ENSMUST00000045956 Top2aQ01320 1528 aaKnown RBP21.62■■□□□ 1.05
Cchcr1-201ENSMUST00000045956 Npm2Q80W85 207 aa21.62■■□□□ 1.05
Cchcr1-201ENSMUST00000045956 Ppargc1bQ8VHJ7 1014 aa21.62■■□□□ 1.05
Cchcr1-201ENSMUST00000045956 TonslQ6NZL6 1363 aa21.58■■□□□ 1.05
Cchcr1-201ENSMUST00000045956 Pds5bQ4VA53 1446 aaKnown RBP21.53■■□□□ 1.04
Cchcr1-201ENSMUST00000045956 Plekhg3Q4VAC9 1341 aa21.49■■□□□ 1.03
Cchcr1-201ENSMUST00000045956 Clip1Q922J3 1391 aa21.48■■□□□ 1.03
Cchcr1-201ENSMUST00000045956 Aplp2Q06335 707 aa21.35■■□□□ 1.01
Cchcr1-201ENSMUST00000045956 Frmpd1A2AKB4 1549 aa21.34■■□□□ 1.01
Cchcr1-201ENSMUST00000045956 Ncapd3Q6ZQK0 1506 aa21.31■■□□□ 1
Cchcr1-201ENSMUST00000045956 TnnQ80Z71 1560 aa21.31■■□□□ 1
Cchcr1-201ENSMUST00000045956 Wdr62Q3U3T8 1523 aa21.3■■□□□ 1
Cchcr1-201ENSMUST00000045956 Eif4g1Q6NZJ6 1600 aaKnown RBP21.27■■□□□ 1
Cchcr1-201ENSMUST00000045956 CenpbP27790 599 aa21.24■□□□□ 0.99
Cchcr1-201ENSMUST00000045956 Ercc6F8VPZ5 1481 aa21.18■□□□□ 0.98
Cchcr1-201ENSMUST00000045956 Il27Q8K3I6 234 aa21.17■□□□□ 0.98
Cchcr1-201ENSMUST00000045956 Kif15Q6P9L6 1387 aa21.16■□□□□ 0.98
Cchcr1-201ENSMUST00000045956 Ap3b1Q9Z1T1 1105 aa21.16■□□□□ 0.98
Cchcr1-201ENSMUST00000045956 Eid3Q3V124 375 aa21.16■□□□□ 0.98
Cchcr1-201ENSMUST00000045956 Lamc3Q9R0B6 1581 aa21.15■□□□□ 0.98
Cchcr1-201ENSMUST00000045956 Eea1Q8BL66 1411 aa21.14■□□□□ 0.97
Cchcr1-201ENSMUST00000045956 Gm38655A0A286YDK6 273 aa21.13■□□□□ 0.97
Cchcr1-201ENSMUST00000045956 Arhgap35Q91YM2 1499 aa21.13■□□□□ 0.97
Cchcr1-201ENSMUST00000045956 PtprkP35822 1457 aa21.11■□□□□ 0.97
Cchcr1-201ENSMUST00000045956 Arap1Q4LDD4 1452 aa21.08■□□□□ 0.97
Cchcr1-201ENSMUST00000045956 Setd5Q5XJV7 1441 aa21.04■□□□□ 0.96
Cchcr1-201ENSMUST00000045956 NrkQ9R0G8 1455 aa21.04■□□□□ 0.96
Cchcr1-201ENSMUST00000045956 Unc13aQ4KUS2 1712 aa21.02■□□□□ 0.96
Cchcr1-201ENSMUST00000045956 Myt1Q8CFC2 1127 aa21.02■□□□□ 0.96
Cchcr1-201ENSMUST00000045956 Ccdc18Q640L5 1455 aa21■□□□□ 0.95
Cchcr1-201ENSMUST00000045956 Camsap1A2AHC3 1581 aa21■□□□□ 0.95
Cchcr1-201ENSMUST00000045956 Arhgef5E9Q7D5 1581 aa20.99■□□□□ 0.95
Cchcr1-201ENSMUST00000045956 Shroom4Q1W617 1475 aa20.97■□□□□ 0.95
Cchcr1-201ENSMUST00000045956 Kdm5bQ80Y84 1544 aa20.96■□□□□ 0.95
Cchcr1-201ENSMUST00000045956 Tnnt3Q9QZ47 272 aa20.93■□□□□ 0.94
Cchcr1-201ENSMUST00000045956 Hnrnpul2Q00PI9 745 aaKnown RBP20.9■□□□□ 0.94
Cchcr1-201ENSMUST00000045956 Baz1bQ9Z277 1479 aa20.89■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms