RNA–Protein interactions for RNA: ENSMUST00000044163.9

Cnot4-201, Transcript of CCR4-NOT transcription complex subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cnot4, Length 3,337 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot4-201ENSMUST00000044163 Chic1Q8CBW7 227 aa12.93□□□□□ -0.34
Cnot4-201ENSMUST00000044163 NischQ80TM9 1593 aa12.27□□□□□ -0.45
Cnot4-201ENSMUST00000044163 Gm35339A0A140LHH9 1649 aa12.16□□□□□ -0.46
Cnot4-201ENSMUST00000044163 Mapk8ip2Q9ERE9 830 aa12.1□□□□□ -0.47
Cnot4-201ENSMUST00000044163 Abcc9P70170 1546 aa11.97□□□□□ -0.49
Cnot4-201ENSMUST00000044163 Abcc8B2RUS7 1588 aa11.71□□□□□ -0.54
Cnot4-201ENSMUST00000044163 Phf23Q8BSN5 401 aa11.68□□□□□ -0.54
Cnot4-201ENSMUST00000044163 Plppr3Q7TPB0 716 aa11.6□□□□□ -0.55
Cnot4-201ENSMUST00000044163 Gab3Q8BSM5 595 aa11.29□□□□□ -0.6
Cnot4-201ENSMUST00000044163 Rhox8Q6VSS7 320 aa11.19□□□□□ -0.62
Cnot4-201ENSMUST00000044163 Rtl1Q7M732 1744 aa11.18□□□□□ -0.62
Cnot4-201ENSMUST00000044163 Ccdc180J3QNE4 1664 aa10.96□□□□□ -0.65
Cnot4-201ENSMUST00000044163 Dcaf1Q80TR8 1506 aa10.96□□□□□ -0.66
Cnot4-201ENSMUST00000044163 ScribQ80U72 1612 aa10.91□□□□□ -0.66
Cnot4-201ENSMUST00000044163 Kcna4Q61423 654 aa10.91□□□□□ -0.66
Cnot4-201ENSMUST00000044163 Senp3Q9EP97 568 aaKnown RBP10.87□□□□□ -0.67
Cnot4-201ENSMUST00000044163 Zcchc6Q5BLK4 1491 aaKnown RBP10.87□□□□□ -0.67
Cnot4-201ENSMUST00000044163 Rb1cc1Q9ESK9 1588 aa10.74□□□□□ -0.69
Cnot4-201ENSMUST00000044163 Kdm5dQ62240 1548 aa10.69□□□□□ -0.7
Cnot4-201ENSMUST00000044163 Baz1aO88379 1555 aa10.65□□□□□ -0.7
Cnot4-201ENSMUST00000044163 NacadQ5SWP3 1504 aa10.6□□□□□ -0.71
Cnot4-201ENSMUST00000044163 Crybg2B7ZCC2 1516 aa10.5□□□□□ -0.73
Cnot4-201ENSMUST00000044163 HrcG5E8J6 738 aa10.46□□□□□ -0.73
Cnot4-201ENSMUST00000044163 Smarca2Q6DIC0 1577 aa10.42□□□□□ -0.74
Cnot4-201ENSMUST00000044163 Ccdc136Q3TVA9 1136 aa10.4□□□□□ -0.74
Cnot4-201ENSMUST00000044163 Sycp2Q9CUU3 1500 aa10.39□□□□□ -0.75
Cnot4-201ENSMUST00000044163 Rpgrip1Q9EPQ2 1331 aa10.26□□□□□ -0.77
Cnot4-201ENSMUST00000044163 Trim41Q5NCC3 630 aa10.23□□□□□ -0.77
Cnot4-201ENSMUST00000044163 Cep164Q5DU05 1446 aa10.16□□□□□ -0.78
Cnot4-201ENSMUST00000044163 BicraF8VPZ9 1578 aa10.16□□□□□ -0.78
Cnot4-201ENSMUST00000044163 Acin1Q9JIX8 1338 aaKnown RBP10.16□□□□□ -0.78
Cnot4-201ENSMUST00000044163 Cecr2E9Q2Z1 1453 aa10.15□□□□□ -0.78
Cnot4-201ENSMUST00000044163 Brd4Q9ESU6 1400 aaKnown RBP10.11□□□□□ -0.79
Cnot4-201ENSMUST00000044163 Synj1Q8CHC4 1574 aa10.06□□□□□ -0.8
Cnot4-201ENSMUST00000044163 Rsf1E9PWW9 1441 aaKnown RBP10.04□□□□□ -0.8
Cnot4-201ENSMUST00000044163 Golga3P55937 1487 aa10.03□□□□□ -0.8
Cnot4-201ENSMUST00000044163 Ehmt2Q9Z148 1263 aaKnown RBP10.02□□□□□ -0.81
Cnot4-201ENSMUST00000044163 CftrP26361 1476 aa10.01□□□□□ -0.81
Cnot4-201ENSMUST00000044163 Ccdc88bQ4QRL3 1481 aa9.98□□□□□ -0.81
Cnot4-201ENSMUST00000044163 Top2bQ64511 1612 aa9.95□□□□□ -0.82
Cnot4-201ENSMUST00000044163 Cttnbp2B9EJA2 1648 aa9.94□□□□□ -0.82
Cnot4-201ENSMUST00000044163 Cngb1E1AZ71 1325 aa9.93□□□□□ -0.82
Cnot4-201ENSMUST00000044163 Smarca4Q3TKT4 1613 aaKnown RBP9.91□□□□□ -0.82
Cnot4-201ENSMUST00000044163 Ppargc1bQ8VHJ7 1014 aa9.9□□□□□ -0.82
Cnot4-201ENSMUST00000044163 Dmrt2Q8BG36 561 aa9.81□□□□□ -0.84
Cnot4-201ENSMUST00000044163 Cc2d2aQ8CFW7 1633 aa9.8□□□□□ -0.84
Cnot4-201ENSMUST00000044163 Esf1Q3V1V3 845 aaKnown RBP9.79□□□□□ -0.84
Cnot4-201ENSMUST00000044163 Fmn1Q05860 1466 aa9.77□□□□□ -0.85
Cnot4-201ENSMUST00000044163 Iqgap2Q3UQ44 1575 aa9.77□□□□□ -0.85
Cnot4-201ENSMUST00000044163 Rapgef2Q8CHG7 1496 aa9.75□□□□□ -0.85
Cnot4-201ENSMUST00000044163 Ube2uB1AUC4 352 aa9.75□□□□□ -0.85
Cnot4-201ENSMUST00000044163 Top2aQ01320 1528 aaKnown RBP9.75□□□□□ -0.85
Cnot4-201ENSMUST00000044163 Atad2bE9Q166 1460 aaKnown RBP9.73□□□□□ -0.85
Cnot4-201ENSMUST00000044163 Pcgf6Q99NA9 353 aa9.68□□□□□ -0.86
Cnot4-201ENSMUST00000044163 Pds5bQ4VA53 1446 aaKnown RBP9.67□□□□□ -0.86
Cnot4-201ENSMUST00000044163 TnnQ80Z71 1560 aa9.66□□□□□ -0.86
Cnot4-201ENSMUST00000044163 Cep162Q6ZQ06 1403 aa9.63□□□□□ -0.87
Cnot4-201ENSMUST00000044163 Eif4g1Q6NZJ6 1600 aaKnown RBP9.63□□□□□ -0.87
Cnot4-201ENSMUST00000044163 Mier1Q5UAK0 511 aa9.61□□□□□ -0.87
Cnot4-201ENSMUST00000044163 Frmpd1A2AKB4 1549 aa9.6□□□□□ -0.87
Cnot4-201ENSMUST00000044163 Wdr62Q3U3T8 1523 aa9.6□□□□□ -0.87
Cnot4-201ENSMUST00000044163 Slc4a1apE9PX68 744 aa9.57□□□□□ -0.88
Cnot4-201ENSMUST00000044163 NefmP08553 848 aa9.57□□□□□ -0.88
Cnot4-201ENSMUST00000044163 Lamc3Q9R0B6 1581 aa9.55□□□□□ -0.88
Cnot4-201ENSMUST00000044163 Supt5hO55201 1082 aaKnown RBP9.55□□□□□ -0.88
Cnot4-201ENSMUST00000044163 Trap1aP19473 224 aa9.54□□□□□ -0.88
Cnot4-201ENSMUST00000044163 NrkQ9R0G8 1455 aa9.51□□□□□ -0.89
Cnot4-201ENSMUST00000044163 Arhgap35Q91YM2 1499 aa9.49□□□□□ -0.89
Cnot4-201ENSMUST00000044163 PtprkP35822 1457 aa9.49□□□□□ -0.89
Cnot4-201ENSMUST00000044163 Hoxd11P23813 323 aa9.48□□□□□ -0.89
Cnot4-201ENSMUST00000044163 Unc13aQ4KUS2 1712 aa9.47□□□□□ -0.89
Cnot4-201ENSMUST00000044163 Ercc6F8VPZ5 1481 aa9.46□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Camsap1A2AHC3 1581 aa9.45□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Shroom4Q1W617 1475 aa9.44□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Clip1Q922J3 1391 aa9.44□□□□□ -0.9
Cnot4-201ENSMUST00000044163 UbtfP25976 765 aaKnown RBP9.43□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Myt1lP97500 1187 aa9.43□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Npm2Q80W85 207 aa9.43□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Kif15Q6P9L6 1387 aa9.43□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Map3k1P53349 1493 aa9.42□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Ncapd3Q6ZQK0 1506 aa9.4□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Zeb1Q64318 1117 aa9.4□□□□□ -0.9
Cnot4-201ENSMUST00000044163 Grin2bQ01097 1482 aa9.39□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Arap1Q4LDD4 1452 aa9.39□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Thoc2B1AZI6 1594 aaKnown RBP9.38□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Arhgef5E9Q7D5 1581 aa9.37□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Ccdc18Q640L5 1455 aa9.36□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Eea1Q8BL66 1411 aa9.36□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Sall2Q9QX96 1004 aa9.35□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Mroh2bQ7M6Y6 1581 aa9.35□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Phldb1Q6PDH0 1371 aaKnown RBP9.34□□□□□ -0.91
Cnot4-201ENSMUST00000044163 AqrQ8CFQ3 1481 aaKnown RBP9.34□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Plekhg3Q4VAC9 1341 aa9.34□□□□□ -0.91
Cnot4-201ENSMUST00000044163 Kdm5bQ80Y84 1544 aa9.32□□□□□ -0.92
Cnot4-201ENSMUST00000044163 Erich3F6QRE9 1637 aa9.32□□□□□ -0.92
Cnot4-201ENSMUST00000044163 Ankrd26Q811D2 1581 aa9.31□□□□□ -0.92
Cnot4-201ENSMUST00000044163 Il27Q8K3I6 234 aa9.3□□□□□ -0.92
Cnot4-201ENSMUST00000044163 Setd5Q5XJV7 1441 aa9.3□□□□□ -0.92
Cnot4-201ENSMUST00000044163 Tiam1Q60610 1591 aa9.3□□□□□ -0.92
Cnot4-201ENSMUST00000044163 Fam135aQ6NS59 1506 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms