RNA–Protein interactions for RNA: ENSMUST00000040430.7

Vat1-201, Transcript of Synaptic vesicle membrane protein VAT-1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vat1, Length 2,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vat1-201ENSMUST00000040430 NischQ80TM9 1593 aa33.6■■■□□ 2.97
Vat1-201ENSMUST00000040430 Gm35339A0A140LHH9 1649 aa32.72■■■□□ 2.83
Vat1-201ENSMUST00000040430 Abcc9P70170 1546 aa32.65■■■□□ 2.82
Vat1-201ENSMUST00000040430 Abcc8B2RUS7 1588 aa31.75■■■□□ 2.67
Vat1-201ENSMUST00000040430 Rhox8Q6VSS7 320 aa31.73■■■□□ 2.67
Vat1-201ENSMUST00000040430 Rtl1Q7M732 1744 aa31.65■■■□□ 2.66
Vat1-201ENSMUST00000040430 Ccdc180J3QNE4 1664 aa31.2■■■□□ 2.59
Vat1-201ENSMUST00000040430 Zcchc6Q5BLK4 1491 aaKnown RBP30.45■■■□□ 2.47
Vat1-201ENSMUST00000040430 Rpgrip1Q9EPQ2 1331 aa30.42■■■□□ 2.46
Vat1-201ENSMUST00000040430 Acin1Q9JIX8 1338 aaKnown RBP29.85■■■□□ 2.37
Vat1-201ENSMUST00000040430 Dcaf1Q80TR8 1506 aa29.61■■■□□ 2.33
Vat1-201ENSMUST00000040430 HrcG5E8J6 738 aa29.6■■■□□ 2.33
Vat1-201ENSMUST00000040430 Ehmt2Q9Z148 1263 aaKnown RBP29.6■■■□□ 2.33
Vat1-201ENSMUST00000040430 Rb1cc1Q9ESK9 1588 aa29.51■■■□□ 2.31
Vat1-201ENSMUST00000040430 ScribQ80U72 1612 aa29.4■■■□□ 2.3
Vat1-201ENSMUST00000040430 Ccdc136Q3TVA9 1136 aa29.4■■■□□ 2.3
Vat1-201ENSMUST00000040430 Baz1aO88379 1555 aa29.13■■■□□ 2.25
Vat1-201ENSMUST00000040430 Pcgf6Q99NA9 353 aa28.96■■■□□ 2.23
Vat1-201ENSMUST00000040430 Trim41Q5NCC3 630 aa28.95■■■□□ 2.23
Vat1-201ENSMUST00000040430 Kdm5dQ62240 1548 aa28.94■■■□□ 2.22
Vat1-201ENSMUST00000040430 Cep164Q5DU05 1446 aa28.63■■■□□ 2.17
Vat1-201ENSMUST00000040430 NacadQ5SWP3 1504 aa28.56■■■□□ 2.16
Vat1-201ENSMUST00000040430 Smarca2Q6DIC0 1577 aa28.54■■■□□ 2.16
Vat1-201ENSMUST00000040430 Supt5hO55201 1082 aaKnown RBP28.38■■■□□ 2.13
Vat1-201ENSMUST00000040430 Crybg2B7ZCC2 1516 aa28.37■■■□□ 2.13
Vat1-201ENSMUST00000040430 Rsf1E9PWW9 1441 aaKnown RBP28.14■■■□□ 2.1
Vat1-201ENSMUST00000040430 Chic1Q8CBW7 227 aa28.11■■■□□ 2.09
Vat1-201ENSMUST00000040430 Cngb1E1AZ71 1325 aa28.05■■■□□ 2.08
Vat1-201ENSMUST00000040430 Gab3Q8BSM5 595 aa28.03■■■□□ 2.08
Vat1-201ENSMUST00000040430 Sycp2Q9CUU3 1500 aa27.95■■■□□ 2.06
Vat1-201ENSMUST00000040430 Ccdc88bQ4QRL3 1481 aa27.88■■■□□ 2.05
Vat1-201ENSMUST00000040430 Zeb1Q64318 1117 aa27.86■■■□□ 2.05
Vat1-201ENSMUST00000040430 Brd4Q9ESU6 1400 aaKnown RBP27.85■■■□□ 2.05
Vat1-201ENSMUST00000040430 Neurod1Q60867 357 aa27.84■■■□□ 2.05
Vat1-201ENSMUST00000040430 Mier1Q5UAK0 511 aa27.77■■■□□ 2.04
Vat1-201ENSMUST00000040430 Golga3P55937 1487 aa27.77■■■□□ 2.04
Vat1-201ENSMUST00000040430 Cecr2E9Q2Z1 1453 aa27.77■■■□□ 2.04
Vat1-201ENSMUST00000040430 NefmP08553 848 aa27.77■■■□□ 2.04
Vat1-201ENSMUST00000040430 Synj1Q8CHC4 1574 aa27.65■■■□□ 2.02
Vat1-201ENSMUST00000040430 Sall2Q9QX96 1004 aa27.54■■■□□ 2
Vat1-201ENSMUST00000040430 Top2bQ64511 1612 aa27.41■■□□□ 1.98
Vat1-201ENSMUST00000040430 CftrP26361 1476 aa27.37■■□□□ 1.97
Vat1-201ENSMUST00000040430 Esf1Q3V1V3 845 aaKnown RBP27.34■■□□□ 1.97
Vat1-201ENSMUST00000040430 BicraF8VPZ9 1578 aa27.32■■□□□ 1.96
Vat1-201ENSMUST00000040430 Cc2d2aQ8CFW7 1633 aa27.21■■□□□ 1.95
Vat1-201ENSMUST00000040430 Las1lA2BE28 776 aaKnown RBP27.2■■□□□ 1.94
Vat1-201ENSMUST00000040430 UbtfP25976 765 aaKnown RBP27.2■■□□□ 1.94
Vat1-201ENSMUST00000040430 Cttnbp2B9EJA2 1648 aa27.19■■□□□ 1.94
Vat1-201ENSMUST00000040430 Rapgef2Q8CHG7 1496 aa27.12■■□□□ 1.93
Vat1-201ENSMUST00000040430 Anks4bQ8K3X6 423 aa27.09■■□□□ 1.93
Vat1-201ENSMUST00000040430 Aebp2Q9Z248 504 aaKnown RBP27.09■■□□□ 1.93
Vat1-201ENSMUST00000040430 Wdr66E9Q743 1299 aa27.05■■□□□ 1.92
Vat1-201ENSMUST00000040430 Top2aQ01320 1528 aaKnown RBP26.93■■□□□ 1.9
Vat1-201ENSMUST00000040430 Csrnp3P59055 597 aa26.92■■□□□ 1.9
Vat1-201ENSMUST00000040430 1700123L14RikQ3V2K7 440 aa26.92■■□□□ 1.9
Vat1-201ENSMUST00000040430 Fmn1Q05860 1466 aa26.91■■□□□ 1.9
Vat1-201ENSMUST00000040430 Cep162Q6ZQ06 1403 aa26.9■■□□□ 1.9
Vat1-201ENSMUST00000040430 ClspnQ80YR7 1315 aa26.88■■□□□ 1.89
Vat1-201ENSMUST00000040430 Smarca4Q3TKT4 1613 aaKnown RBP26.87■■□□□ 1.89
Vat1-201ENSMUST00000040430 Myt1lP97500 1187 aa26.86■■□□□ 1.89
Vat1-201ENSMUST00000040430 Cdk11bP24788 784 aaKnown RBP26.79■■□□□ 1.88
Vat1-201ENSMUST00000040430 Ppargc1bQ8VHJ7 1014 aa26.78■■□□□ 1.88
Vat1-201ENSMUST00000040430 Nop58Q6DFW4 536 aaKnown RBP26.77■■□□□ 1.88
Vat1-201ENSMUST00000040430 TonslQ6NZL6 1363 aa26.7■■□□□ 1.86
Vat1-201ENSMUST00000040430 Npm2Q80W85 207 aa26.62■■□□□ 1.85
Vat1-201ENSMUST00000040430 Eif4g1Q6NZJ6 1600 aaKnown RBP26.61■■□□□ 1.85
Vat1-201ENSMUST00000040430 Clip1Q922J3 1391 aa26.61■■□□□ 1.85
Vat1-201ENSMUST00000040430 Plekhg3Q4VAC9 1341 aa26.6■■□□□ 1.85
Vat1-201ENSMUST00000040430 Ncapd3Q6ZQK0 1506 aa26.56■■□□□ 1.84
Vat1-201ENSMUST00000040430 Aplp2Q06335 707 aa26.49■■□□□ 1.83
Vat1-201ENSMUST00000040430 Iqgap2Q3UQ44 1575 aa26.47■■□□□ 1.83
Vat1-201ENSMUST00000040430 Arhgap35Q91YM2 1499 aa26.31■■□□□ 1.8
Vat1-201ENSMUST00000040430 TnnQ80Z71 1560 aa26.3■■□□□ 1.8
Vat1-201ENSMUST00000040430 Gm38655A0A286YDK6 273 aa26.27■■□□□ 1.8
Vat1-201ENSMUST00000040430 Arap1Q4LDD4 1452 aa26.26■■□□□ 1.79
Vat1-201ENSMUST00000040430 CenpbP27790 599 aa26.25■■□□□ 1.79
Vat1-201ENSMUST00000040430 Kdm5bQ80Y84 1544 aa26.22■■□□□ 1.79
Vat1-201ENSMUST00000040430 PtprkP35822 1457 aa26.21■■□□□ 1.79
Vat1-201ENSMUST00000040430 Eid3Q3V124 375 aa26.18■■□□□ 1.78
Vat1-201ENSMUST00000040430 Eea1Q8BL66 1411 aa26.18■■□□□ 1.78
Vat1-201ENSMUST00000040430 NrkQ9R0G8 1455 aa26.15■■□□□ 1.78
Vat1-201ENSMUST00000040430 Ap3b1Q9Z1T1 1105 aa26.14■■□□□ 1.78
Vat1-201ENSMUST00000040430 Arhgef5E9Q7D5 1581 aa26.13■■□□□ 1.77
Vat1-201ENSMUST00000040430 Atad2bE9Q166 1460 aaKnown RBP26.13■■□□□ 1.77
Vat1-201ENSMUST00000040430 Ccdc18Q640L5 1455 aa26.07■■□□□ 1.76
Vat1-201ENSMUST00000040430 Setd5Q5XJV7 1441 aa26.06■■□□□ 1.76
Vat1-201ENSMUST00000040430 Pds5bQ4VA53 1446 aaKnown RBP26.02■■□□□ 1.76
Vat1-201ENSMUST00000040430 Myt1Q8CFC2 1127 aa25.98■■□□□ 1.75
Vat1-201ENSMUST00000040430 Shroom4Q1W617 1475 aa25.97■■□□□ 1.75
Vat1-201ENSMUST00000040430 Tiam1Q60610 1591 aa25.97■■□□□ 1.75
Vat1-201ENSMUST00000040430 TchhA0A0B4J1F9 1599 aa25.96■■□□□ 1.75
Vat1-201ENSMUST00000040430 Hnrnpul2Q00PI9 745 aaKnown RBP25.95■■□□□ 1.75
Vat1-201ENSMUST00000040430 Il27Q8K3I6 234 aa25.95■■□□□ 1.74
Vat1-201ENSMUST00000040430 Baz1bQ9Z277 1479 aa25.95■■□□□ 1.74
Vat1-201ENSMUST00000040430 Lamc3Q9R0B6 1581 aa25.93■■□□□ 1.74
Vat1-201ENSMUST00000040430 Map3k1P53349 1493 aa25.93■■□□□ 1.74
Vat1-201ENSMUST00000040430 Frmpd1A2AKB4 1549 aa25.88■■□□□ 1.73
Vat1-201ENSMUST00000040430 Camsap1A2AHC3 1581 aa25.87■■□□□ 1.73
Vat1-201ENSMUST00000040430 Naip1Q9QWK5 1403 aa25.85■■□□□ 1.73
Vat1-201ENSMUST00000040430 AqrQ8CFQ3 1481 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 22,080 RNA–protein pairs in 119.2 ms