RNA–Protein interactions for RNA: ENSMUST00000034928.11

Tpm1-202, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-202ENSMUST00000034928 NischQ80TM9 1593 aa27.57■■■□□ 2
Tpm1-202ENSMUST00000034928 Gm35339A0A140LHH9 1649 aa27.29■■□□□ 1.96
Tpm1-202ENSMUST00000034928 Abcc9P70170 1546 aa26.85■■□□□ 1.89
Tpm1-202ENSMUST00000034928 Abcc8B2RUS7 1588 aa26.23■■□□□ 1.79
Tpm1-202ENSMUST00000034928 Rtl1Q7M732 1744 aa25.42■■□□□ 1.66
Tpm1-202ENSMUST00000034928 Rhox8Q6VSS7 320 aa25.26■■□□□ 1.63
Tpm1-202ENSMUST00000034928 Ccdc180J3QNE4 1664 aa24.86■■□□□ 1.57
Tpm1-202ENSMUST00000034928 Dcaf1Q80TR8 1506 aa24.73■■□□□ 1.55
Tpm1-202ENSMUST00000034928 ScribQ80U72 1612 aa24.33■■□□□ 1.49
Tpm1-202ENSMUST00000034928 Zcchc6Q5BLK4 1491 aaKnown RBP24.27■■□□□ 1.48
Tpm1-202ENSMUST00000034928 Rb1cc1Q9ESK9 1588 aa24.13■■□□□ 1.45
Tpm1-202ENSMUST00000034928 Baz1aO88379 1555 aa23.95■■□□□ 1.42
Tpm1-202ENSMUST00000034928 Kdm5dQ62240 1548 aa23.92■■□□□ 1.42
Tpm1-202ENSMUST00000034928 NacadQ5SWP3 1504 aa23.88■■□□□ 1.41
Tpm1-202ENSMUST00000034928 Crybg2B7ZCC2 1516 aa23.74■■□□□ 1.39
Tpm1-202ENSMUST00000034928 HrcG5E8J6 738 aa23.71■■□□□ 1.39
Tpm1-202ENSMUST00000034928 Rpgrip1Q9EPQ2 1331 aa23.5■■□□□ 1.35
Tpm1-202ENSMUST00000034928 Smarca2Q6DIC0 1577 aa23.4■■□□□ 1.34
Tpm1-202ENSMUST00000034928 Ccdc136Q3TVA9 1136 aa23.36■■□□□ 1.33
Tpm1-202ENSMUST00000034928 Sycp2Q9CUU3 1500 aa23.32■■□□□ 1.32
Tpm1-202ENSMUST00000034928 Trim41Q5NCC3 630 aa23.24■■□□□ 1.31
Tpm1-202ENSMUST00000034928 Acin1Q9JIX8 1338 aaKnown RBP22.94■■□□□ 1.26
Tpm1-202ENSMUST00000034928 Cep164Q5DU05 1446 aa22.92■■□□□ 1.26
Tpm1-202ENSMUST00000034928 Brd4Q9ESU6 1400 aaKnown RBP22.88■■□□□ 1.25
Tpm1-202ENSMUST00000034928 BicraF8VPZ9 1578 aa22.68■■□□□ 1.22
Tpm1-202ENSMUST00000034928 Cecr2E9Q2Z1 1453 aa22.63■■□□□ 1.21
Tpm1-202ENSMUST00000034928 Golga3P55937 1487 aa22.59■■□□□ 1.21
Tpm1-202ENSMUST00000034928 Synj1Q8CHC4 1574 aa22.53■■□□□ 1.2
Tpm1-202ENSMUST00000034928 Rsf1E9PWW9 1441 aaKnown RBP22.47■■□□□ 1.19
Tpm1-202ENSMUST00000034928 CftrP26361 1476 aa22.47■■□□□ 1.19
Tpm1-202ENSMUST00000034928 Cngb1E1AZ71 1325 aa22.4■■□□□ 1.18
Tpm1-202ENSMUST00000034928 Cttnbp2B9EJA2 1648 aa22.4■■□□□ 1.18
Tpm1-202ENSMUST00000034928 Ehmt2Q9Z148 1263 aaKnown RBP22.34■■□□□ 1.17
Tpm1-202ENSMUST00000034928 Top2bQ64511 1612 aa22.34■■□□□ 1.17
Tpm1-202ENSMUST00000034928 Chic1Q8CBW7 227 aa22.32■■□□□ 1.16
Tpm1-202ENSMUST00000034928 Smarca4Q3TKT4 1613 aaKnown RBP22.3■■□□□ 1.16
Tpm1-202ENSMUST00000034928 Ccdc88bQ4QRL3 1481 aa22.28■■□□□ 1.16
Tpm1-202ENSMUST00000034928 Esf1Q3V1V3 845 aaKnown RBP22.16■■□□□ 1.14
Tpm1-202ENSMUST00000034928 Fmn1Q05860 1466 aa22.04■■□□□ 1.12
Tpm1-202ENSMUST00000034928 Gab3Q8BSM5 595 aa22.02■■□□□ 1.12
Tpm1-202ENSMUST00000034928 Iqgap2Q3UQ44 1575 aa21.95■■□□□ 1.1
Tpm1-202ENSMUST00000034928 Atad2bE9Q166 1460 aaKnown RBP21.93■■□□□ 1.1
Tpm1-202ENSMUST00000034928 Cc2d2aQ8CFW7 1633 aa21.93■■□□□ 1.1
Tpm1-202ENSMUST00000034928 Pds5bQ4VA53 1446 aaKnown RBP21.92■■□□□ 1.1
Tpm1-202ENSMUST00000034928 Rapgef2Q8CHG7 1496 aa21.9■■□□□ 1.1
Tpm1-202ENSMUST00000034928 Top2aQ01320 1528 aaKnown RBP21.89■■□□□ 1.1
Tpm1-202ENSMUST00000034928 NefmP08553 848 aa21.8■■□□□ 1.08
Tpm1-202ENSMUST00000034928 Pcgf6Q99NA9 353 aa21.78■■□□□ 1.08
Tpm1-202ENSMUST00000034928 TnnQ80Z71 1560 aa21.68■■□□□ 1.06
Tpm1-202ENSMUST00000034928 Cep162Q6ZQ06 1403 aa21.67■■□□□ 1.06
Tpm1-202ENSMUST00000034928 Mier1Q5UAK0 511 aa21.59■■□□□ 1.05
Tpm1-202ENSMUST00000034928 Eif4g1Q6NZJ6 1600 aaKnown RBP21.54■■□□□ 1.04
Tpm1-202ENSMUST00000034928 Wdr62Q3U3T8 1523 aa21.54■■□□□ 1.04
Tpm1-202ENSMUST00000034928 Ercc6F8VPZ5 1481 aa21.5■■□□□ 1.03
Tpm1-202ENSMUST00000034928 Frmpd1A2AKB4 1549 aa21.49■■□□□ 1.03
Tpm1-202ENSMUST00000034928 Lamc3Q9R0B6 1581 aa21.48■■□□□ 1.03
Tpm1-202ENSMUST00000034928 Thoc2B1AZI6 1594 aaKnown RBP21.44■■□□□ 1.02
Tpm1-202ENSMUST00000034928 Supt5hO55201 1082 aaKnown RBP21.39■■□□□ 1.01
Tpm1-202ENSMUST00000034928 Npm2Q80W85 207 aa21.38■■□□□ 1.01
Tpm1-202ENSMUST00000034928 NrkQ9R0G8 1455 aa21.38■■□□□ 1.01
Tpm1-202ENSMUST00000034928 Clip1Q922J3 1391 aa21.3■■□□□ 1
Tpm1-202ENSMUST00000034928 Arhgap35Q91YM2 1499 aa21.28■■□□□ 1
Tpm1-202ENSMUST00000034928 Myt1lP97500 1187 aa21.28■■□□□ 1
Tpm1-202ENSMUST00000034928 Map3k1P53349 1493 aa21.27■■□□□ 1
Tpm1-202ENSMUST00000034928 Dnajc5bQ9CQ94 199 aa21.26■□□□□ 0.99
Tpm1-202ENSMUST00000034928 UbtfP25976 765 aaKnown RBP21.25■□□□□ 0.99
Tpm1-202ENSMUST00000034928 Shroom4Q1W617 1475 aa21.25■□□□□ 0.99
Tpm1-202ENSMUST00000034928 Kif15Q6P9L6 1387 aa21.24■□□□□ 0.99
Tpm1-202ENSMUST00000034928 Camsap1A2AHC3 1581 aa21.23■□□□□ 0.99
Tpm1-202ENSMUST00000034928 Ccdc18Q640L5 1455 aa21.2■□□□□ 0.98
Tpm1-202ENSMUST00000034928 Unc13aQ4KUS2 1712 aa21.19■□□□□ 0.98
Tpm1-202ENSMUST00000034928 Zeb1Q64318 1117 aa21.18■□□□□ 0.98
Tpm1-202ENSMUST00000034928 Eea1Q8BL66 1411 aa21.17■□□□□ 0.98
Tpm1-202ENSMUST00000034928 PtprkP35822 1457 aa21.17■□□□□ 0.98
Tpm1-202ENSMUST00000034928 Phldb1Q6PDH0 1371 aaKnown RBP21.13■□□□□ 0.97
Tpm1-202ENSMUST00000034928 Grin2bQ01097 1482 aa21.11■□□□□ 0.97
Tpm1-202ENSMUST00000034928 Las1lA2BE28 776 aaKnown RBP21.1■□□□□ 0.97
Tpm1-202ENSMUST00000034928 Ncapd3Q6ZQK0 1506 aa21.09■□□□□ 0.97
Tpm1-202ENSMUST00000034928 Fam135aQ6NS59 1506 aa21.08■□□□□ 0.97
Tpm1-202ENSMUST00000034928 AqrQ8CFQ3 1481 aaKnown RBP21.05■□□□□ 0.96
Tpm1-202ENSMUST00000034928 Arhgef5E9Q7D5 1581 aa21.05■□□□□ 0.96
Tpm1-202ENSMUST00000034928 Mroh2bQ7M6Y6 1581 aa21.04■□□□□ 0.96
Tpm1-202ENSMUST00000034928 Arap1Q4LDD4 1452 aa21.03■□□□□ 0.96
Tpm1-202ENSMUST00000034928 Setd5Q5XJV7 1441 aa20.99■□□□□ 0.95
Tpm1-202ENSMUST00000034928 Ubl4bQ9CQ84 188 aa20.99■□□□□ 0.95
Tpm1-202ENSMUST00000034928 Erich3F6QRE9 1637 aa20.97■□□□□ 0.95
Tpm1-202ENSMUST00000034928 Sall2Q9QX96 1004 aa20.97■□□□□ 0.95
Tpm1-202ENSMUST00000034928 Plekhg3Q4VAC9 1341 aa20.95■□□□□ 0.95
Tpm1-202ENSMUST00000034928 Efcab5A0JP43 1406 aa20.95■□□□□ 0.94
Tpm1-202ENSMUST00000034928 Il27Q8K3I6 234 aa20.94■□□□□ 0.94
Tpm1-202ENSMUST00000034928 Tiam1Q60610 1591 aa20.92■□□□□ 0.94
Tpm1-202ENSMUST00000034928 TonslQ6NZL6 1363 aa20.89■□□□□ 0.93
Tpm1-202ENSMUST00000034928 Cux2P70298 1426 aa20.88■□□□□ 0.93
Tpm1-202ENSMUST00000034928 Baz1bQ9Z277 1479 aa20.88■□□□□ 0.93
Tpm1-202ENSMUST00000034928 ClspnQ80YR7 1315 aa20.85■□□□□ 0.93
Tpm1-202ENSMUST00000034928 TchhA0A0B4J1F9 1599 aa20.85■□□□□ 0.93
Tpm1-202ENSMUST00000034928 Ankrd26Q811D2 1581 aa20.85■□□□□ 0.93
Tpm1-202ENSMUST00000034928 Carmil1Q6EDY6 1374 aa20.84■□□□□ 0.93
Tpm1-202ENSMUST00000034928 LrpprcQ6PB66 1392 aaKnown RBP20.82■□□□□ 0.92
Tpm1-202ENSMUST00000034928 Npm1Q61937 292 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms