RNA–Protein interactions for RNA: ENSMUST00000031598.10

Ddx54-201, Transcript of ATP-dependent RNA helicase DDX54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx54, Length 4,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54-201ENSMUST00000031598 Rhox8Q6VSS7 320 aa19.7■□□□□ 0.74
Ddx54-201ENSMUST00000031598 NischQ80TM9 1593 aa19.14■□□□□ 0.65
Ddx54-201ENSMUST00000031598 Rpgrip1Q9EPQ2 1331 aa18.51■□□□□ 0.55
Ddx54-201ENSMUST00000031598 Abcc9P70170 1546 aa18.23■□□□□ 0.51
Ddx54-201ENSMUST00000031598 Ehmt2Q9Z148 1263 aaKnown RBP18.14■□□□□ 0.5
Ddx54-201ENSMUST00000031598 Ccdc136Q3TVA9 1136 aa17.97■□□□□ 0.47
Ddx54-201ENSMUST00000031598 Abcc8B2RUS7 1588 aa17.84■□□□□ 0.45
Ddx54-201ENSMUST00000031598 Las1lA2BE28 776 aaKnown RBP17.76■□□□□ 0.43
Ddx54-201ENSMUST00000031598 Gm35339A0A140LHH9 1649 aa17.67■□□□□ 0.42
Ddx54-201ENSMUST00000031598 Ccdc180J3QNE4 1664 aa17.58■□□□□ 0.41
Ddx54-201ENSMUST00000031598 Rtl1Q7M732 1744 aa17.54■□□□□ 0.4
Ddx54-201ENSMUST00000031598 Trim41Q5NCC3 630 aa17.47■□□□□ 0.39
Ddx54-201ENSMUST00000031598 Myt1Q8CFC2 1127 aa17.41■□□□□ 0.38
Ddx54-201ENSMUST00000031598 Cngb1E1AZ71 1325 aa17.36■□□□□ 0.37
Ddx54-201ENSMUST00000031598 Pcgf6Q99NA9 353 aa17.35■□□□□ 0.37
Ddx54-201ENSMUST00000031598 CenpbP27790 599 aa17.33■□□□□ 0.36
Ddx54-201ENSMUST00000031598 DiexfQ8BTT6 772 aaKnown RBP17.32■□□□□ 0.36
Ddx54-201ENSMUST00000031598 Gab3Q8BSM5 595 aa17.29■□□□□ 0.36
Ddx54-201ENSMUST00000031598 Acin1Q9JIX8 1338 aaKnown RBP17.28■□□□□ 0.36
Ddx54-201ENSMUST00000031598 HrcG5E8J6 738 aa17.25■□□□□ 0.35
Ddx54-201ENSMUST00000031598 Zeb1Q64318 1117 aa17.24■□□□□ 0.35
Ddx54-201ENSMUST00000031598 Esf1Q3V1V3 845 aaKnown RBP17.17■□□□□ 0.34
Ddx54-201ENSMUST00000031598 Zcchc6Q5BLK4 1491 aaKnown RBP17.04■□□□□ 0.32
Ddx54-201ENSMUST00000031598 Wdr66E9Q743 1299 aa17.02■□□□□ 0.32
Ddx54-201ENSMUST00000031598 Amer1Q7TS75 1132 aa17.02■□□□□ 0.31
Ddx54-201ENSMUST00000031598 Rb1cc1Q9ESK9 1588 aa16.8■□□□□ 0.28
Ddx54-201ENSMUST00000031598 Myt1lP97500 1187 aa16.76■□□□□ 0.27
Ddx54-201ENSMUST00000031598 Dcaf1Q80TR8 1506 aa16.72■□□□□ 0.27
Ddx54-201ENSMUST00000031598 Supt5hO55201 1082 aaKnown RBP16.71■□□□□ 0.27
Ddx54-201ENSMUST00000031598 Neurod1Q60867 357 aa16.71■□□□□ 0.27
Ddx54-201ENSMUST00000031598 Npm2Q80W85 207 aa16.69■□□□□ 0.26
Ddx54-201ENSMUST00000031598 UbtfP25976 765 aaKnown RBP16.63■□□□□ 0.25
Ddx54-201ENSMUST00000031598 NefmP08553 848 aa16.57■□□□□ 0.24
Ddx54-201ENSMUST00000031598 Bcl11aQ9QYE3 773 aa16.54■□□□□ 0.24
Ddx54-201ENSMUST00000031598 Chic1Q8CBW7 227 aa16.5■□□□□ 0.23
Ddx54-201ENSMUST00000031598 Baz1aO88379 1555 aa16.49■□□□□ 0.23
Ddx54-201ENSMUST00000031598 1700123L14RikQ3V2K7 440 aa16.46■□□□□ 0.23
Ddx54-201ENSMUST00000031598 Cep164Q5DU05 1446 aa16.44■□□□□ 0.22
Ddx54-201ENSMUST00000031598 NacadQ5SWP3 1504 aa16.42■□□□□ 0.22
Ddx54-201ENSMUST00000031598 Ppargc1bQ8VHJ7 1014 aa16.42■□□□□ 0.22
Ddx54-201ENSMUST00000031598 Kdm5dQ62240 1548 aa16.41■□□□□ 0.22
Ddx54-201ENSMUST00000031598 Mier1Q5UAK0 511 aa16.38■□□□□ 0.21
Ddx54-201ENSMUST00000031598 Cdk11bP24788 784 aaKnown RBP16.33■□□□□ 0.21
Ddx54-201ENSMUST00000031598 Csrnp3P59055 597 aa16.33■□□□□ 0.2
Ddx54-201ENSMUST00000031598 Brd4Q9ESU6 1400 aaKnown RBP16.32■□□□□ 0.2
Ddx54-201ENSMUST00000031598 Il27Q8K3I6 234 aa16.32■□□□□ 0.2
Ddx54-201ENSMUST00000031598 Pelp1Q9DBD5 1123 aaKnown RBP16.31■□□□□ 0.2
Ddx54-201ENSMUST00000031598 ScribQ80U72 1612 aa16.25■□□□□ 0.19
Ddx54-201ENSMUST00000031598 Aplp2Q06335 707 aa16.24■□□□□ 0.19
Ddx54-201ENSMUST00000031598 Nop58Q6DFW4 536 aaKnown RBP16.23■□□□□ 0.19
Ddx54-201ENSMUST00000031598 Anks4bQ8K3X6 423 aa16.22■□□□□ 0.19
Ddx54-201ENSMUST00000031598 Ube2uB1AUC4 352 aa16.18■□□□□ 0.18
Ddx54-201ENSMUST00000031598 Ap3b1Q9Z1T1 1105 aa16.15■□□□□ 0.18
Ddx54-201ENSMUST00000031598 Rsf1E9PWW9 1441 aaKnown RBP16.12■□□□□ 0.17
Ddx54-201ENSMUST00000031598 Gm38655A0A286YDK6 273 aa16.08■□□□□ 0.16
Ddx54-201ENSMUST00000031598 Plekhg3Q4VAC9 1341 aa16.07■□□□□ 0.16
Ddx54-201ENSMUST00000031598 Slc24a1Q91WD8 1130 aa16.07■□□□□ 0.16
Ddx54-201ENSMUST00000031598 Golga3P55937 1487 aa16.04■□□□□ 0.16
Ddx54-201ENSMUST00000031598 Sall2Q9QX96 1004 aa16.03■□□□□ 0.16
Ddx54-201ENSMUST00000031598 PrkcshO08795 521 aa16■□□□□ 0.15
Ddx54-201ENSMUST00000031598 Ttbk1Q6PCN3 1308 aa15.98■□□□□ 0.15
Ddx54-201ENSMUST00000031598 TonslQ6NZL6 1363 aa15.98■□□□□ 0.15
Ddx54-201ENSMUST00000031598 Ccdc88bQ4QRL3 1481 aa15.95■□□□□ 0.14
Ddx54-201ENSMUST00000031598 Fam50aQ9WV03 339 aaKnown RBP15.94■□□□□ 0.14
Ddx54-201ENSMUST00000031598 Smarca2Q6DIC0 1577 aa15.91■□□□□ 0.14
Ddx54-201ENSMUST00000031598 Sycp2Q9CUU3 1500 aa15.89■□□□□ 0.14
Ddx54-201ENSMUST00000031598 Crybg2B7ZCC2 1516 aa15.88■□□□□ 0.13
Ddx54-201ENSMUST00000031598 Clip1Q922J3 1391 aa15.87■□□□□ 0.13
Ddx54-201ENSMUST00000031598 Rtl5Q5DTT4 599 aa15.87■□□□□ 0.13
Ddx54-201ENSMUST00000031598 Cecr2E9Q2Z1 1453 aa15.85■□□□□ 0.13
Ddx54-201ENSMUST00000031598 Stra8P70278 393 aa15.82■□□□□ 0.12
Ddx54-201ENSMUST00000031598 ClspnQ80YR7 1315 aa15.81■□□□□ 0.12
Ddx54-201ENSMUST00000031598 Eid3Q3V124 375 aa15.81■□□□□ 0.12
Ddx54-201ENSMUST00000031598 Lmod2Q3UHZ5 550 aa15.8■□□□□ 0.12
Ddx54-201ENSMUST00000031598 NclP09405 707 aaKnown RBP15.77■□□□□ 0.12
Ddx54-201ENSMUST00000031598 Tnnt3Q9QZ47 272 aa15.77■□□□□ 0.12
Ddx54-201ENSMUST00000031598 Fam71e1A1L3C1 212 aa15.73■□□□□ 0.11
Ddx54-201ENSMUST00000031598 Aebp2Q9Z248 504 aaKnown RBP15.72■□□□□ 0.11
Ddx54-201ENSMUST00000031598 Npm1Q61937 292 aaKnown RBP15.7■□□□□ 0.1
Ddx54-201ENSMUST00000031598 Eif5bQ05D44 1216 aaKnown RBP15.68■□□□□ 0.1
Ddx54-201ENSMUST00000031598 CftrP26361 1476 aa15.67■□□□□ 0.1
Ddx54-201ENSMUST00000031598 Mapk8ip2Q9ERE9 830 aa15.67■□□□□ 0.1
Ddx54-201ENSMUST00000031598 Synj1Q8CHC4 1574 aa15.66■□□□□ 0.1
Ddx54-201ENSMUST00000031598 Anp32aO35381 247 aa15.56■□□□□ 0.08
Ddx54-201ENSMUST00000031598 Cep162Q6ZQ06 1403 aa15.54■□□□□ 0.08
Ddx54-201ENSMUST00000031598 Setd5Q5XJV7 1441 aa15.54■□□□□ 0.08
Ddx54-201ENSMUST00000031598 4933416C03RikQ3V063 378 aa15.51■□□□□ 0.07
Ddx54-201ENSMUST00000031598 Fmn1Q05860 1466 aa15.51■□□□□ 0.07
Ddx54-201ENSMUST00000031598 Kif15Q6P9L6 1387 aa15.5■□□□□ 0.07
Ddx54-201ENSMUST00000031598 Pknox2Q8BG99 474 aa15.5■□□□□ 0.07
Ddx54-201ENSMUST00000031598 BlmO88700 1416 aa15.49■□□□□ 0.07
Ddx54-201ENSMUST00000031598 Ifnlr1Q8CGK5 535 aa15.49■□□□□ 0.07
Ddx54-201ENSMUST00000031598 Ubl4bQ9CQ84 188 aa15.47■□□□□ 0.07
Ddx54-201ENSMUST00000031598 NrdcQ8BHG1 1161 aa15.44■□□□□ 0.06
Ddx54-201ENSMUST00000031598 Eea1Q8BL66 1411 aa15.43■□□□□ 0.06
Ddx54-201ENSMUST00000031598 Rapgef2Q8CHG7 1496 aa15.41■□□□□ 0.06
Ddx54-201ENSMUST00000031598 Cttnbp2B9EJA2 1648 aa15.35■□□□□ 0.05
Ddx54-201ENSMUST00000031598 Chic2Q9D9G3 165 aa15.35■□□□□ 0.05
Ddx54-201ENSMUST00000031598 Smarca4Q3TKT4 1613 aaKnown RBP15.35■□□□□ 0.05
Ddx54-201ENSMUST00000031598 Hdac5Q9Z2V6 1113 aa15.34■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms