RNA–Protein interactions for RNA: ENSMUST00000029871.11

Cdh17-201, Transcript of Cadherin-17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdh17, Length 3,462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17-201ENSMUST00000029871 Gm35339A0A140LHH9 1649 aa12.31□□□□□ -0.44
Cdh17-201ENSMUST00000029871 NischQ80TM9 1593 aa11.95□□□□□ -0.5
Cdh17-201ENSMUST00000029871 Abcc9P70170 1546 aa11.64□□□□□ -0.55
Cdh17-201ENSMUST00000029871 Abcc8B2RUS7 1588 aa11.62□□□□□ -0.55
Cdh17-201ENSMUST00000029871 ScribQ80U72 1612 aa11.22□□□□□ -0.61
Cdh17-201ENSMUST00000029871 NacadQ5SWP3 1504 aa10.84□□□□□ -0.67
Cdh17-201ENSMUST00000029871 Kdm5dQ62240 1548 aa10.81□□□□□ -0.68
Cdh17-201ENSMUST00000029871 Dcaf1Q80TR8 1506 aa10.78□□□□□ -0.68
Cdh17-201ENSMUST00000029871 Sycp2Q9CUU3 1500 aa10.64□□□□□ -0.71
Cdh17-201ENSMUST00000029871 BicraF8VPZ9 1578 aa10.51□□□□□ -0.73
Cdh17-201ENSMUST00000029871 Ccdc180J3QNE4 1664 aa10.45□□□□□ -0.74
Cdh17-201ENSMUST00000029871 Rb1cc1Q9ESK9 1588 aa10.4□□□□□ -0.74
Cdh17-201ENSMUST00000029871 Crybg2B7ZCC2 1516 aa10.36□□□□□ -0.75
Cdh17-201ENSMUST00000029871 Baz1aO88379 1555 aa10.3□□□□□ -0.76
Cdh17-201ENSMUST00000029871 Thoc2B1AZI6 1594 aaKnown RBP10.18□□□□□ -0.78
Cdh17-201ENSMUST00000029871 Pds5bQ4VA53 1446 aaKnown RBP10.17□□□□□ -0.78
Cdh17-201ENSMUST00000029871 Atad2bE9Q166 1460 aaKnown RBP10.08□□□□□ -0.8
Cdh17-201ENSMUST00000029871 Dnajc5bQ9CQ94 199 aa10.05□□□□□ -0.8
Cdh17-201ENSMUST00000029871 Smarca2Q6DIC0 1577 aa10.02□□□□□ -0.81
Cdh17-201ENSMUST00000029871 Smarca4Q3TKT4 1613 aaKnown RBP10□□□□□ -0.81
Cdh17-201ENSMUST00000029871 Zcchc6Q5BLK4 1491 aaKnown RBP9.98□□□□□ -0.81
Cdh17-201ENSMUST00000029871 Rhox8Q6VSS7 320 aa9.95□□□□□ -0.82
Cdh17-201ENSMUST00000029871 Fam135aQ6NS59 1506 aa9.94□□□□□ -0.82
Cdh17-201ENSMUST00000029871 Baz1bQ9Z277 1479 aa9.93□□□□□ -0.82
Cdh17-201ENSMUST00000029871 Iqgap2Q3UQ44 1575 aa9.93□□□□□ -0.82
Cdh17-201ENSMUST00000029871 Cc2d2aQ8CFW7 1633 aa9.91□□□□□ -0.82
Cdh17-201ENSMUST00000029871 Ercc6F8VPZ5 1481 aa9.9□□□□□ -0.82
Cdh17-201ENSMUST00000029871 Cecr2E9Q2Z1 1453 aa9.9□□□□□ -0.82
Cdh17-201ENSMUST00000029871 Wdr62Q3U3T8 1523 aa9.88□□□□□ -0.83
Cdh17-201ENSMUST00000029871 Frmpd1A2AKB4 1549 aa9.83□□□□□ -0.84
Cdh17-201ENSMUST00000029871 Rtl1Q7M732 1744 aa9.8□□□□□ -0.84
Cdh17-201ENSMUST00000029871 Phldb1Q6PDH0 1371 aaKnown RBP9.75□□□□□ -0.85
Cdh17-201ENSMUST00000029871 Unc13aQ4KUS2 1712 aa9.74□□□□□ -0.85
Cdh17-201ENSMUST00000029871 Cttnbp2B9EJA2 1648 aa9.73□□□□□ -0.85
Cdh17-201ENSMUST00000029871 CftrP26361 1476 aa9.71□□□□□ -0.86
Cdh17-201ENSMUST00000029871 Synj1Q8CHC4 1574 aa9.67□□□□□ -0.86
Cdh17-201ENSMUST00000029871 Brd4Q9ESU6 1400 aaKnown RBP9.64□□□□□ -0.87
Cdh17-201ENSMUST00000029871 Mrc2Q64449 1479 aa9.61□□□□□ -0.87
Cdh17-201ENSMUST00000029871 Ubl4bQ9CQ84 188 aa9.52□□□□□ -0.89
Cdh17-201ENSMUST00000029871 Lamc3Q9R0B6 1581 aa9.48□□□□□ -0.89
Cdh17-201ENSMUST00000029871 TnnQ80Z71 1560 aa9.42□□□□□ -0.9
Cdh17-201ENSMUST00000029871 Rsf1E9PWW9 1441 aaKnown RBP9.42□□□□□ -0.9
Cdh17-201ENSMUST00000029871 Lrriq1Q0P5X1 1673 aa9.41□□□□□ -0.9
Cdh17-201ENSMUST00000029871 Top2bQ64511 1612 aa9.39□□□□□ -0.91
Cdh17-201ENSMUST00000029871 Kif21aQ9QXL2 1672 aa9.39□□□□□ -0.91
Cdh17-201ENSMUST00000029871 Cux2P70298 1426 aa9.39□□□□□ -0.91
Cdh17-201ENSMUST00000029871 Kif15Q6P9L6 1387 aa9.36□□□□□ -0.91
Cdh17-201ENSMUST00000029871 Ccdc136Q3TVA9 1136 aa9.35□□□□□ -0.91
Cdh17-201ENSMUST00000029871 Trim41Q5NCC3 630 aa9.33□□□□□ -0.92
Cdh17-201ENSMUST00000029871 Eif4g3Q80XI3 1579 aaKnown RBP9.33□□□□□ -0.92
Cdh17-201ENSMUST00000029871 Golga3P55937 1487 aa9.3□□□□□ -0.92
Cdh17-201ENSMUST00000029871 Camsap1A2AHC3 1581 aa9.27□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Cep164Q5DU05 1446 aa9.26□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Esf1Q3V1V3 845 aaKnown RBP9.25□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Ube2uB1AUC4 352 aa9.25□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Shroom2A2ALU4 1481 aa9.24□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Urb2E9Q7L1 1524 aaKnown RBP9.23□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Ccdc18Q640L5 1455 aa9.23□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Fmn1Q05860 1466 aa9.22□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Chic1Q8CBW7 227 aa9.22□□□□□ -0.93
Cdh17-201ENSMUST00000029871 Crocc2F6XLV1 1638 aa9.2□□□□□ -0.94
Cdh17-201ENSMUST00000029871 Dhx29Q6PGC1 1365 aaKnown RBP9.2□□□□□ -0.94
Cdh17-201ENSMUST00000029871 LrpprcQ6PB66 1392 aaKnown RBP9.19□□□□□ -0.94
Cdh17-201ENSMUST00000029871 PogzQ8BZH4 1409 aaKnown RBP9.18□□□□□ -0.94
Cdh17-201ENSMUST00000029871 Plb1Q3TTY0 1478 aa9.18□□□□□ -0.94
Cdh17-201ENSMUST00000029871 Npm1Q61937 292 aaKnown RBP9.18□□□□□ -0.94
Cdh17-201ENSMUST00000029871 Gpatch8A2A6A1 1505 aa9.16□□□□□ -0.94
Cdh17-201ENSMUST00000029871 Dnajc5P60904 198 aa9.16□□□□□ -0.94
Cdh17-201ENSMUST00000029871 Ift140E9PY46 1464 aa9.16□□□□□ -0.94
Cdh17-201ENSMUST00000029871 Rusc2Q80U22 1514 aa9.15□□□□□ -0.94
Cdh17-201ENSMUST00000029871 Pbrm1Q8BSQ9 1634 aaKnown RBP9.13□□□□□ -0.95
Cdh17-201ENSMUST00000029871 Grin2bQ01097 1482 aa9.13□□□□□ -0.95
Cdh17-201ENSMUST00000029871 Duox2A2AQ99 1517 aa9.11□□□□□ -0.95
Cdh17-201ENSMUST00000029871 Rpgrip1Q9EPQ2 1331 aa9.11□□□□□ -0.95
Cdh17-201ENSMUST00000029871 Disp1Q3TDN0 1521 aa9.08□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Nup160Q9Z0W3 1402 aaKnown RBP9.08□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Top2aQ01320 1528 aaKnown RBP9.07□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Efcab5A0JP43 1406 aa9.07□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Samd9lQ69Z37 1561 aa9.07□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Col17a1Q07563 1470 aa9.06□□□□□ -0.96
Cdh17-201ENSMUST00000029871 NrkQ9R0G8 1455 aa9.05□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Setd1bQ8CFT2 1985 aa9.04□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Zcchc11B2RX14 1644 aaKnown RBP9.03□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Cc2d2bA0A286YDU8 1405 aa9.03□□□□□ -0.96
Cdh17-201ENSMUST00000029871 Magi3Q9EQJ9 1476 aa9□□□□□ -0.97
Cdh17-201ENSMUST00000029871 Cngb1E1AZ71 1325 aa9□□□□□ -0.97
Cdh17-201ENSMUST00000029871 Ccdc88bQ4QRL3 1481 aa8.99□□□□□ -0.97
Cdh17-201ENSMUST00000029871 AqrQ8CFQ3 1481 aaKnown RBP8.98□□□□□ -0.97
Cdh17-201ENSMUST00000029871 Shroom4Q1W617 1475 aa8.98□□□□□ -0.97
Cdh17-201ENSMUST00000029871 Grin2aP35436 1464 aa8.97□□□□□ -0.97
Cdh17-201ENSMUST00000029871 Il27Q8K3I6 234 aa8.97□□□□□ -0.97
Cdh17-201ENSMUST00000029871 HrcG5E8J6 738 aa8.96□□□□□ -0.98
Cdh17-201ENSMUST00000029871 SynmQ70IV5 1561 aa8.94□□□□□ -0.98
Cdh17-201ENSMUST00000029871 Pabpn1Q8CCS6 302 aaKnown RBP8.94□□□□□ -0.98
Cdh17-201ENSMUST00000029871 Pla2r1Q62028 1487 aa8.93□□□□□ -0.98
Cdh17-201ENSMUST00000029871 Mapk8ip2Q9ERE9 830 aa8.93□□□□□ -0.98
Cdh17-201ENSMUST00000029871 PtprkP35822 1457 aa8.92□□□□□ -0.98
Cdh17-201ENSMUST00000029871 Rad54l2Q99NG0 1466 aa8.92□□□□□ -0.98
Cdh17-201ENSMUST00000029871 Fgd6Q69ZL1 1399 aa8.89□□□□□ -0.99
Cdh17-201ENSMUST00000029871 Dnmt1P13864 1620 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms