RNA–Protein interactions for RNA: ENSMUST00000029753.12

Ecm1-201, Transcript of Extracellular matrix protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ecm1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1-201ENSMUST00000029753 NischQ80TM9 1593 aa30.43■■■□□ 2.46
Ecm1-201ENSMUST00000029753 Gm35339A0A140LHH9 1649 aa30.23■■■□□ 2.43
Ecm1-201ENSMUST00000029753 Abcc9P70170 1546 aa29.63■■■□□ 2.33
Ecm1-201ENSMUST00000029753 Abcc8B2RUS7 1588 aa29■■■□□ 2.23
Ecm1-201ENSMUST00000029753 Rhox8Q6VSS7 320 aa27.67■■■□□ 2.02
Ecm1-201ENSMUST00000029753 Rtl1Q7M732 1744 aa27.66■■■□□ 2.02
Ecm1-201ENSMUST00000029753 ScribQ80U72 1612 aa27.4■■□□□ 1.98
Ecm1-201ENSMUST00000029753 Dcaf1Q80TR8 1506 aa27.2■■□□□ 1.95
Ecm1-201ENSMUST00000029753 Ccdc180J3QNE4 1664 aa27■■□□□ 1.91
Ecm1-201ENSMUST00000029753 Rb1cc1Q9ESK9 1588 aa26.64■■□□□ 1.86
Ecm1-201ENSMUST00000029753 Zcchc6Q5BLK4 1491 aaKnown RBP26.59■■□□□ 1.85
Ecm1-201ENSMUST00000029753 Kdm5dQ62240 1548 aa26.53■■□□□ 1.84
Ecm1-201ENSMUST00000029753 NacadQ5SWP3 1504 aa26.45■■□□□ 1.82
Ecm1-201ENSMUST00000029753 Baz1aO88379 1555 aa26.4■■□□□ 1.82
Ecm1-201ENSMUST00000029753 Crybg2B7ZCC2 1516 aa26.1■■□□□ 1.77
Ecm1-201ENSMUST00000029753 Sycp2Q9CUU3 1500 aa25.96■■□□□ 1.75
Ecm1-201ENSMUST00000029753 Smarca2Q6DIC0 1577 aa25.8■■□□□ 1.72
Ecm1-201ENSMUST00000029753 HrcG5E8J6 738 aa25.7■■□□□ 1.71
Ecm1-201ENSMUST00000029753 BicraF8VPZ9 1578 aa25.67■■□□□ 1.7
Ecm1-201ENSMUST00000029753 Ccdc136Q3TVA9 1136 aa25.65■■□□□ 1.7
Ecm1-201ENSMUST00000029753 Trim41Q5NCC3 630 aa25.38■■□□□ 1.65
Ecm1-201ENSMUST00000029753 Dnajc5bQ9CQ94 199 aa25.26■■□□□ 1.63
Ecm1-201ENSMUST00000029753 Brd4Q9ESU6 1400 aaKnown RBP25.12■■□□□ 1.61
Ecm1-201ENSMUST00000029753 Cecr2E9Q2Z1 1453 aa25.06■■□□□ 1.6
Ecm1-201ENSMUST00000029753 Rpgrip1Q9EPQ2 1331 aa25.03■■□□□ 1.6
Ecm1-201ENSMUST00000029753 Cep164Q5DU05 1446 aa25■■□□□ 1.59
Ecm1-201ENSMUST00000029753 Pds5bQ4VA53 1446 aaKnown RBP24.91■■□□□ 1.58
Ecm1-201ENSMUST00000029753 Synj1Q8CHC4 1574 aa24.88■■□□□ 1.57
Ecm1-201ENSMUST00000029753 Thoc2B1AZI6 1594 aaKnown RBP24.83■■□□□ 1.56
Ecm1-201ENSMUST00000029753 Golga3P55937 1487 aa24.79■■□□□ 1.56
Ecm1-201ENSMUST00000029753 CftrP26361 1476 aa24.78■■□□□ 1.56
Ecm1-201ENSMUST00000029753 Cttnbp2B9EJA2 1648 aa24.72■■□□□ 1.55
Ecm1-201ENSMUST00000029753 Smarca4Q3TKT4 1613 aaKnown RBP24.68■■□□□ 1.54
Ecm1-201ENSMUST00000029753 Acin1Q9JIX8 1338 aaKnown RBP24.67■■□□□ 1.54
Ecm1-201ENSMUST00000029753 Rsf1E9PWW9 1441 aaKnown RBP24.66■■□□□ 1.54
Ecm1-201ENSMUST00000029753 Atad2bE9Q166 1460 aaKnown RBP24.66■■□□□ 1.54
Ecm1-201ENSMUST00000029753 Top2bQ64511 1612 aa24.61■■□□□ 1.53
Ecm1-201ENSMUST00000029753 Cngb1E1AZ71 1325 aa24.58■■□□□ 1.52
Ecm1-201ENSMUST00000029753 Ccdc88bQ4QRL3 1481 aa24.51■■□□□ 1.51
Ecm1-201ENSMUST00000029753 Chic1Q8CBW7 227 aa24.5■■□□□ 1.51
Ecm1-201ENSMUST00000029753 Cc2d2aQ8CFW7 1633 aa24.42■■□□□ 1.5
Ecm1-201ENSMUST00000029753 Ercc6F8VPZ5 1481 aa24.38■■□□□ 1.49
Ecm1-201ENSMUST00000029753 Esf1Q3V1V3 845 aaKnown RBP24.34■■□□□ 1.49
Ecm1-201ENSMUST00000029753 Ehmt2Q9Z148 1263 aaKnown RBP24.34■■□□□ 1.49
Ecm1-201ENSMUST00000029753 Iqgap2Q3UQ44 1575 aa24.32■■□□□ 1.48
Ecm1-201ENSMUST00000029753 Fmn1Q05860 1466 aa24.21■■□□□ 1.47
Ecm1-201ENSMUST00000029753 Fam135aQ6NS59 1506 aa24.2■■□□□ 1.46
Ecm1-201ENSMUST00000029753 Wdr62Q3U3T8 1523 aa24.12■■□□□ 1.45
Ecm1-201ENSMUST00000029753 Gab3Q8BSM5 595 aa24.11■■□□□ 1.45
Ecm1-201ENSMUST00000029753 Frmpd1A2AKB4 1549 aa24.1■■□□□ 1.45
Ecm1-201ENSMUST00000029753 Top2aQ01320 1528 aaKnown RBP24.07■■□□□ 1.44
Ecm1-201ENSMUST00000029753 Rapgef2Q8CHG7 1496 aa23.98■■□□□ 1.43
Ecm1-201ENSMUST00000029753 Phldb1Q6PDH0 1371 aaKnown RBP23.97■■□□□ 1.43
Ecm1-201ENSMUST00000029753 TnnQ80Z71 1560 aa23.93■■□□□ 1.42
Ecm1-201ENSMUST00000029753 Baz1bQ9Z277 1479 aa23.86■■□□□ 1.41
Ecm1-201ENSMUST00000029753 Unc13aQ4KUS2 1712 aa23.81■■□□□ 1.4
Ecm1-201ENSMUST00000029753 Ubl4bQ9CQ84 188 aa23.77■■□□□ 1.4
Ecm1-201ENSMUST00000029753 Cep162Q6ZQ06 1403 aa23.73■■□□□ 1.39
Ecm1-201ENSMUST00000029753 Lamc3Q9R0B6 1581 aa23.72■■□□□ 1.39
Ecm1-201ENSMUST00000029753 Eif4g1Q6NZJ6 1600 aaKnown RBP23.69■■□□□ 1.38
Ecm1-201ENSMUST00000029753 Mrc2Q64449 1479 aa23.63■■□□□ 1.37
Ecm1-201ENSMUST00000029753 NrkQ9R0G8 1455 aa23.49■■□□□ 1.35
Ecm1-201ENSMUST00000029753 NefmP08553 848 aa23.46■■□□□ 1.35
Ecm1-201ENSMUST00000029753 Camsap1A2AHC3 1581 aa23.46■■□□□ 1.35
Ecm1-201ENSMUST00000029753 Kif15Q6P9L6 1387 aa23.45■■□□□ 1.34
Ecm1-201ENSMUST00000029753 Mier1Q5UAK0 511 aa23.45■■□□□ 1.34
Ecm1-201ENSMUST00000029753 Npm2Q80W85 207 aa23.41■■□□□ 1.34
Ecm1-201ENSMUST00000029753 Arhgap35Q91YM2 1499 aa23.39■■□□□ 1.34
Ecm1-201ENSMUST00000029753 Shroom4Q1W617 1475 aa23.36■■□□□ 1.33
Ecm1-201ENSMUST00000029753 PtprkP35822 1457 aa23.36■■□□□ 1.33
Ecm1-201ENSMUST00000029753 Pcgf6Q99NA9 353 aa23.36■■□□□ 1.33
Ecm1-201ENSMUST00000029753 Map3k1P53349 1493 aa23.32■■□□□ 1.32
Ecm1-201ENSMUST00000029753 Ccdc18Q640L5 1455 aa23.31■■□□□ 1.32
Ecm1-201ENSMUST00000029753 Myt1lP97500 1187 aa23.31■■□□□ 1.32
Ecm1-201ENSMUST00000029753 Grin2bQ01097 1482 aa23.28■■□□□ 1.32
Ecm1-201ENSMUST00000029753 Clip1Q922J3 1391 aa23.27■■□□□ 1.32
Ecm1-201ENSMUST00000029753 Cux2P70298 1426 aa23.19■■□□□ 1.3
Ecm1-201ENSMUST00000029753 Lrriq1Q0P5X1 1673 aa23.17■■□□□ 1.3
Ecm1-201ENSMUST00000029753 UbtfP25976 765 aaKnown RBP23.15■■□□□ 1.3
Ecm1-201ENSMUST00000029753 Eea1Q8BL66 1411 aa23.15■■□□□ 1.3
Ecm1-201ENSMUST00000029753 Mroh2bQ7M6Y6 1581 aa23.14■■□□□ 1.29
Ecm1-201ENSMUST00000029753 Il27Q8K3I6 234 aa23.12■■□□□ 1.29
Ecm1-201ENSMUST00000029753 AqrQ8CFQ3 1481 aaKnown RBP23.11■■□□□ 1.29
Ecm1-201ENSMUST00000029753 Arap1Q4LDD4 1452 aa23.09■■□□□ 1.29
Ecm1-201ENSMUST00000029753 Kif21aQ9QXL2 1672 aa23.08■■□□□ 1.29
Ecm1-201ENSMUST00000029753 Arhgef5E9Q7D5 1581 aa23.07■■□□□ 1.28
Ecm1-201ENSMUST00000029753 Supt5hO55201 1082 aaKnown RBP23.05■■□□□ 1.28
Ecm1-201ENSMUST00000029753 Efcab5A0JP43 1406 aa23.05■■□□□ 1.28
Ecm1-201ENSMUST00000029753 Erich3F6QRE9 1637 aa23.04■■□□□ 1.28
Ecm1-201ENSMUST00000029753 Ncapd3Q6ZQK0 1506 aa23.01■■□□□ 1.27
Ecm1-201ENSMUST00000029753 Setd5Q5XJV7 1441 aa22.99■■□□□ 1.27
Ecm1-201ENSMUST00000029753 Dnajc5P60904 198 aa22.98■■□□□ 1.27
Ecm1-201ENSMUST00000029753 LrpprcQ6PB66 1392 aaKnown RBP22.97■■□□□ 1.27
Ecm1-201ENSMUST00000029753 PogzQ8BZH4 1409 aaKnown RBP22.97■■□□□ 1.27
Ecm1-201ENSMUST00000029753 Ankrd26Q811D2 1581 aa22.95■■□□□ 1.26
Ecm1-201ENSMUST00000029753 Plekhg3Q4VAC9 1341 aa22.95■■□□□ 1.26
Ecm1-201ENSMUST00000029753 Npm1Q61937 292 aaKnown RBP22.94■■□□□ 1.26
Ecm1-201ENSMUST00000029753 Tiam1Q60610 1591 aa22.93■■□□□ 1.26
Ecm1-201ENSMUST00000029753 Zeb1Q64318 1117 aa22.91■■□□□ 1.26
Ecm1-201ENSMUST00000029753 Duox2A2AQ99 1517 aa22.9■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms