RNA–Protein interactions for RNA: ENSMUST00000029005.3

Rtfdc1-201, Transcript of Protein RTF2 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtfdc1, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1-201ENSMUST00000029005 NischQ80TM9 1593 aa25.51■■□□□ 1.67
Rtfdc1-201ENSMUST00000029005 Abcc9P70170 1546 aa24.84■■□□□ 1.57
Rtfdc1-201ENSMUST00000029005 Gm35339A0A140LHH9 1649 aa24.82■■□□□ 1.56
Rtfdc1-201ENSMUST00000029005 Rtl1Q7M732 1744 aa24.56■■□□□ 1.52
Rtfdc1-201ENSMUST00000029005 Ccdc180J3QNE4 1664 aa24.23■■□□□ 1.47
Rtfdc1-201ENSMUST00000029005 Rpgrip1Q9EPQ2 1331 aa24.21■■□□□ 1.47
Rtfdc1-201ENSMUST00000029005 Rhox8Q6VSS7 320 aa24.18■■□□□ 1.46
Rtfdc1-201ENSMUST00000029005 Abcc8B2RUS7 1588 aa24.07■■□□□ 1.44
Rtfdc1-201ENSMUST00000029005 Zcchc6Q5BLK4 1491 aaKnown RBP23.47■■□□□ 1.35
Rtfdc1-201ENSMUST00000029005 Acin1Q9JIX8 1338 aaKnown RBP23.45■■□□□ 1.35
Rtfdc1-201ENSMUST00000029005 Dcaf1Q80TR8 1506 aa23.04■■□□□ 1.28
Rtfdc1-201ENSMUST00000029005 HrcG5E8J6 738 aa23.03■■□□□ 1.28
Rtfdc1-201ENSMUST00000029005 Pcgf6Q99NA9 353 aa22.8■■□□□ 1.24
Rtfdc1-201ENSMUST00000029005 Ehmt2Q9Z148 1263 aaKnown RBP22.73■■□□□ 1.23
Rtfdc1-201ENSMUST00000029005 Rb1cc1Q9ESK9 1588 aa22.39■■□□□ 1.17
Rtfdc1-201ENSMUST00000029005 Trim41Q5NCC3 630 aa22.37■■□□□ 1.17
Rtfdc1-201ENSMUST00000029005 Ccdc136Q3TVA9 1136 aa22.33■■□□□ 1.16
Rtfdc1-201ENSMUST00000029005 Supt5hO55201 1082 aaKnown RBP22.19■■□□□ 1.14
Rtfdc1-201ENSMUST00000029005 Baz1aO88379 1555 aa22.19■■□□□ 1.14
Rtfdc1-201ENSMUST00000029005 Cep164Q5DU05 1446 aa22.12■■□□□ 1.13
Rtfdc1-201ENSMUST00000029005 ScribQ80U72 1612 aa22.07■■□□□ 1.12
Rtfdc1-201ENSMUST00000029005 Neurod1Q60867 357 aa21.92■■□□□ 1.1
Rtfdc1-201ENSMUST00000029005 Kdm5dQ62240 1548 aa21.83■■□□□ 1.09
Rtfdc1-201ENSMUST00000029005 Las1lA2BE28 776 aaKnown RBP21.76■■□□□ 1.07
Rtfdc1-201ENSMUST00000029005 NefmP08553 848 aa21.76■■□□□ 1.07
Rtfdc1-201ENSMUST00000029005 Smarca2Q6DIC0 1577 aa21.74■■□□□ 1.07
Rtfdc1-201ENSMUST00000029005 Crybg2B7ZCC2 1516 aa21.72■■□□□ 1.07
Rtfdc1-201ENSMUST00000029005 NacadQ5SWP3 1504 aa21.61■■□□□ 1.05
Rtfdc1-201ENSMUST00000029005 Zeb1Q64318 1117 aa21.6■■□□□ 1.05
Rtfdc1-201ENSMUST00000029005 Rsf1E9PWW9 1441 aaKnown RBP21.53■■□□□ 1.04
Rtfdc1-201ENSMUST00000029005 Cngb1E1AZ71 1325 aa21.52■■□□□ 1.04
Rtfdc1-201ENSMUST00000029005 Mier1Q5UAK0 511 aa21.51■■□□□ 1.03
Rtfdc1-201ENSMUST00000029005 Sall2Q9QX96 1004 aa21.48■■□□□ 1.03
Rtfdc1-201ENSMUST00000029005 Anks4bQ8K3X6 423 aa21.46■■□□□ 1.03
Rtfdc1-201ENSMUST00000029005 Chic1Q8CBW7 227 aa21.45■■□□□ 1.02
Rtfdc1-201ENSMUST00000029005 Gab3Q8BSM5 595 aa21.36■■□□□ 1.01
Rtfdc1-201ENSMUST00000029005 1700123L14RikQ3V2K7 440 aa21.3■■□□□ 1
Rtfdc1-201ENSMUST00000029005 Brd4Q9ESU6 1400 aaKnown RBP21.28■■□□□ 1
Rtfdc1-201ENSMUST00000029005 Ccdc88bQ4QRL3 1481 aa21.28■■□□□ 1
Rtfdc1-201ENSMUST00000029005 Golga3P55937 1487 aa21.25■□□□□ 0.99
Rtfdc1-201ENSMUST00000029005 Csrnp3P59055 597 aa21.17■□□□□ 0.98
Rtfdc1-201ENSMUST00000029005 Myt1Q8CFC2 1127 aa21.12■□□□□ 0.97
Rtfdc1-201ENSMUST00000029005 Sycp2Q9CUU3 1500 aa21.11■□□□□ 0.97
Rtfdc1-201ENSMUST00000029005 Aplp2Q06335 707 aa21.07■□□□□ 0.96
Rtfdc1-201ENSMUST00000029005 Cdk11bP24788 784 aaKnown RBP21.04■□□□□ 0.96
Rtfdc1-201ENSMUST00000029005 ClspnQ80YR7 1315 aa21.03■□□□□ 0.96
Rtfdc1-201ENSMUST00000029005 Aebp2Q9Z248 504 aaKnown RBP21■□□□□ 0.95
Rtfdc1-201ENSMUST00000029005 Wdr66E9Q743 1299 aa21■□□□□ 0.95
Rtfdc1-201ENSMUST00000029005 Cecr2E9Q2Z1 1453 aa20.98■□□□□ 0.95
Rtfdc1-201ENSMUST00000029005 Synj1Q8CHC4 1574 aa20.98■□□□□ 0.95
Rtfdc1-201ENSMUST00000029005 Nop58Q6DFW4 536 aaKnown RBP20.97■□□□□ 0.95
Rtfdc1-201ENSMUST00000029005 CenpbP27790 599 aa20.96■□□□□ 0.95
Rtfdc1-201ENSMUST00000029005 Top2bQ64511 1612 aa20.91■□□□□ 0.94
Rtfdc1-201ENSMUST00000029005 UbtfP25976 765 aaKnown RBP20.88■□□□□ 0.93
Rtfdc1-201ENSMUST00000029005 Rapgef2Q8CHG7 1496 aa20.84■□□□□ 0.93
Rtfdc1-201ENSMUST00000029005 CftrP26361 1476 aa20.81■□□□□ 0.92
Rtfdc1-201ENSMUST00000029005 TonslQ6NZL6 1363 aa20.74■□□□□ 0.91
Rtfdc1-201ENSMUST00000029005 Esf1Q3V1V3 845 aaKnown RBP20.72■□□□□ 0.91
Rtfdc1-201ENSMUST00000029005 Cttnbp2B9EJA2 1648 aa20.65■□□□□ 0.9
Rtfdc1-201ENSMUST00000029005 Cep162Q6ZQ06 1403 aa20.63■□□□□ 0.89
Rtfdc1-201ENSMUST00000029005 Cc2d2aQ8CFW7 1633 aa20.61■□□□□ 0.89
Rtfdc1-201ENSMUST00000029005 Top2aQ01320 1528 aaKnown RBP20.59■□□□□ 0.89
Rtfdc1-201ENSMUST00000029005 Fmn1Q05860 1466 aa20.58■□□□□ 0.88
Rtfdc1-201ENSMUST00000029005 Ppargc1bQ8VHJ7 1014 aa20.56■□□□□ 0.88
Rtfdc1-201ENSMUST00000029005 BicraF8VPZ9 1578 aa20.52■□□□□ 0.88
Rtfdc1-201ENSMUST00000029005 Ncapd3Q6ZQK0 1506 aa20.52■□□□□ 0.87
Rtfdc1-201ENSMUST00000029005 Gm38655A0A286YDK6 273 aa20.45■□□□□ 0.86
Rtfdc1-201ENSMUST00000029005 Tnnt3Q9QZ47 272 aa20.44■□□□□ 0.86
Rtfdc1-201ENSMUST00000029005 Myt1lP97500 1187 aa20.44■□□□□ 0.86
Rtfdc1-201ENSMUST00000029005 Clip1Q922J3 1391 aa20.43■□□□□ 0.86
Rtfdc1-201ENSMUST00000029005 Eif4g1Q6NZJ6 1600 aaKnown RBP20.39■□□□□ 0.85
Rtfdc1-201ENSMUST00000029005 Smarca4Q3TKT4 1613 aaKnown RBP20.33■□□□□ 0.85
Rtfdc1-201ENSMUST00000029005 Plekhg3Q4VAC9 1341 aa20.31■□□□□ 0.84
Rtfdc1-201ENSMUST00000029005 Hnrnpul2Q00PI9 745 aaKnown RBP20.28■□□□□ 0.84
Rtfdc1-201ENSMUST00000029005 Npm2Q80W85 207 aa20.27■□□□□ 0.84
Rtfdc1-201ENSMUST00000029005 Kdm5bQ80Y84 1544 aa20.26■□□□□ 0.83
Rtfdc1-201ENSMUST00000029005 Fam71e1A1L3C1 212 aa20.24■□□□□ 0.83
Rtfdc1-201ENSMUST00000029005 SafbD3YXK2 937 aaKnown RBP20.17■□□□□ 0.82
Rtfdc1-201ENSMUST00000029005 DiexfQ8BTT6 772 aaKnown RBP20.15■□□□□ 0.82
Rtfdc1-201ENSMUST00000029005 Ccdc18Q640L5 1455 aa20.11■□□□□ 0.81
Rtfdc1-201ENSMUST00000029005 Eea1Q8BL66 1411 aa20.11■□□□□ 0.81
Rtfdc1-201ENSMUST00000029005 Arhgap35Q91YM2 1499 aa20.1■□□□□ 0.81
Rtfdc1-201ENSMUST00000029005 Arap1Q4LDD4 1452 aa20.1■□□□□ 0.81
Rtfdc1-201ENSMUST00000029005 Stra8P70278 393 aa20.08■□□□□ 0.81
Rtfdc1-201ENSMUST00000029005 TchhA0A0B4J1F9 1599 aa20.08■□□□□ 0.81
Rtfdc1-201ENSMUST00000029005 Mapk8ip2Q9ERE9 830 aa20.08■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Arhgef5E9Q7D5 1581 aa20.06■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Eid3Q3V124 375 aa20.05■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Anp32aO35381 247 aa20.04■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Znf710Q3U288 666 aa20.04■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Bcl11aQ9QYE3 773 aa20.04■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Rpap1Q80TE0 1409 aa20.04■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Ap3b1Q9Z1T1 1105 aa20.03■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Baz1bQ9Z277 1479 aa20.03■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 TnnQ80Z71 1560 aa20.03■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 NrkQ9R0G8 1455 aa20.02■□□□□ 0.8
Rtfdc1-201ENSMUST00000029005 Iqgap2Q3UQ44 1575 aa19.97■□□□□ 0.79
Rtfdc1-201ENSMUST00000029005 Rtl5Q5DTT4 599 aa19.94■□□□□ 0.78
Rtfdc1-201ENSMUST00000029005 Setd5Q5XJV7 1441 aa19.94■□□□□ 0.78
Rtfdc1-201ENSMUST00000029005 Tiam1Q60610 1591 aa19.93■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 155 ms