RNA–Protein interactions for RNA: ENSMUST00000028234.11

Traf1-201, Transcript of TNF receptor-associated factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Traf1, Length 2,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1-201ENSMUST00000028234 NischQ80TM9 1593 aa28.51■■■□□ 2.15
Traf1-201ENSMUST00000028234 Gm35339A0A140LHH9 1649 aa28.3■■■□□ 2.12
Traf1-201ENSMUST00000028234 Abcc9P70170 1546 aa27.7■■■□□ 2.02
Traf1-201ENSMUST00000028234 Abcc8B2RUS7 1588 aa27.14■■□□□ 1.94
Traf1-201ENSMUST00000028234 Rhox8Q6VSS7 320 aa25.97■■□□□ 1.75
Traf1-201ENSMUST00000028234 Rtl1Q7M732 1744 aa25.6■■□□□ 1.69
Traf1-201ENSMUST00000028234 ScribQ80U72 1612 aa25.49■■□□□ 1.67
Traf1-201ENSMUST00000028234 Dcaf1Q80TR8 1506 aa25.33■■□□□ 1.65
Traf1-201ENSMUST00000028234 Rb1cc1Q9ESK9 1588 aa25■■□□□ 1.59
Traf1-201ENSMUST00000028234 Kdm5dQ62240 1548 aa24.95■■□□□ 1.58
Traf1-201ENSMUST00000028234 Ccdc180J3QNE4 1664 aa24.94■■□□□ 1.58
Traf1-201ENSMUST00000028234 NacadQ5SWP3 1504 aa24.83■■□□□ 1.57
Traf1-201ENSMUST00000028234 Baz1aO88379 1555 aa24.69■■□□□ 1.54
Traf1-201ENSMUST00000028234 Zcchc6Q5BLK4 1491 aaKnown RBP24.53■■□□□ 1.52
Traf1-201ENSMUST00000028234 Crybg2B7ZCC2 1516 aa24.29■■□□□ 1.48
Traf1-201ENSMUST00000028234 Sycp2Q9CUU3 1500 aa24.27■■□□□ 1.48
Traf1-201ENSMUST00000028234 Smarca2Q6DIC0 1577 aa24.09■■□□□ 1.45
Traf1-201ENSMUST00000028234 Ccdc136Q3TVA9 1136 aa24.06■■□□□ 1.44
Traf1-201ENSMUST00000028234 BicraF8VPZ9 1578 aa23.74■■□□□ 1.39
Traf1-201ENSMUST00000028234 Trim41Q5NCC3 630 aa23.7■■□□□ 1.38
Traf1-201ENSMUST00000028234 HrcG5E8J6 738 aa23.66■■□□□ 1.38
Traf1-201ENSMUST00000028234 Brd4Q9ESU6 1400 aaKnown RBP23.51■■□□□ 1.35
Traf1-201ENSMUST00000028234 Cecr2E9Q2Z1 1453 aa23.48■■□□□ 1.35
Traf1-201ENSMUST00000028234 Synj1Q8CHC4 1574 aa23.3■■□□□ 1.32
Traf1-201ENSMUST00000028234 Smarca4Q3TKT4 1613 aaKnown RBP23.21■■□□□ 1.31
Traf1-201ENSMUST00000028234 Cttnbp2B9EJA2 1648 aa23.18■■□□□ 1.3
Traf1-201ENSMUST00000028234 CftrP26361 1476 aa23.17■■□□□ 1.3
Traf1-201ENSMUST00000028234 Cep164Q5DU05 1446 aa23.15■■□□□ 1.3
Traf1-201ENSMUST00000028234 Cngb1E1AZ71 1325 aa23.12■■□□□ 1.29
Traf1-201ENSMUST00000028234 Golga3P55937 1487 aa23.1■■□□□ 1.29
Traf1-201ENSMUST00000028234 Esf1Q3V1V3 845 aaKnown RBP22.97■■□□□ 1.27
Traf1-201ENSMUST00000028234 Top2bQ64511 1612 aa22.93■■□□□ 1.26
Traf1-201ENSMUST00000028234 Rsf1E9PWW9 1441 aaKnown RBP22.92■■□□□ 1.26
Traf1-201ENSMUST00000028234 Iqgap2Q3UQ44 1575 aa22.92■■□□□ 1.26
Traf1-201ENSMUST00000028234 Atad2bE9Q166 1460 aaKnown RBP22.84■■□□□ 1.25
Traf1-201ENSMUST00000028234 Ccdc88bQ4QRL3 1481 aa22.82■■□□□ 1.24
Traf1-201ENSMUST00000028234 Pds5bQ4VA53 1446 aaKnown RBP22.82■■□□□ 1.24
Traf1-201ENSMUST00000028234 Chic1Q8CBW7 227 aa22.8■■□□□ 1.24
Traf1-201ENSMUST00000028234 Cc2d2aQ8CFW7 1633 aa22.74■■□□□ 1.23
Traf1-201ENSMUST00000028234 Rpgrip1Q9EPQ2 1331 aa22.71■■□□□ 1.23
Traf1-201ENSMUST00000028234 Fmn1Q05860 1466 aa22.6■■□□□ 1.21
Traf1-201ENSMUST00000028234 Ehmt2Q9Z148 1263 aaKnown RBP22.6■■□□□ 1.21
Traf1-201ENSMUST00000028234 Gab3Q8BSM5 595 aa22.59■■□□□ 1.21
Traf1-201ENSMUST00000028234 Acin1Q9JIX8 1338 aaKnown RBP22.51■■□□□ 1.19
Traf1-201ENSMUST00000028234 Wdr62Q3U3T8 1523 aa22.49■■□□□ 1.19
Traf1-201ENSMUST00000028234 Ercc6F8VPZ5 1481 aa22.46■■□□□ 1.19
Traf1-201ENSMUST00000028234 Frmpd1A2AKB4 1549 aa22.43■■□□□ 1.18
Traf1-201ENSMUST00000028234 Top2aQ01320 1528 aaKnown RBP22.43■■□□□ 1.18
Traf1-201ENSMUST00000028234 TnnQ80Z71 1560 aa22.35■■□□□ 1.17
Traf1-201ENSMUST00000028234 Unc13aQ4KUS2 1712 aa22.29■■□□□ 1.16
Traf1-201ENSMUST00000028234 Rapgef2Q8CHG7 1496 aa22.25■■□□□ 1.15
Traf1-201ENSMUST00000028234 Lamc3Q9R0B6 1581 aa22.22■■□□□ 1.15
Traf1-201ENSMUST00000028234 Thoc2B1AZI6 1594 aaKnown RBP22.17■■□□□ 1.14
Traf1-201ENSMUST00000028234 Kif15Q6P9L6 1387 aa22.11■■□□□ 1.13
Traf1-201ENSMUST00000028234 Cep162Q6ZQ06 1403 aa22.06■■□□□ 1.12
Traf1-201ENSMUST00000028234 Npm2Q80W85 207 aa22.03■■□□□ 1.12
Traf1-201ENSMUST00000028234 Phldb1Q6PDH0 1371 aaKnown RBP22.02■■□□□ 1.11
Traf1-201ENSMUST00000028234 Camsap1A2AHC3 1581 aa22.01■■□□□ 1.11
Traf1-201ENSMUST00000028234 Eif4g1Q6NZJ6 1600 aaKnown RBP21.97■■□□□ 1.11
Traf1-201ENSMUST00000028234 Ccdc18Q640L5 1455 aa21.95■■□□□ 1.1
Traf1-201ENSMUST00000028234 Fam135aQ6NS59 1506 aa21.92■■□□□ 1.1
Traf1-201ENSMUST00000028234 Myt1lP97500 1187 aa21.91■■□□□ 1.1
Traf1-201ENSMUST00000028234 Il27Q8K3I6 234 aa21.9■■□□□ 1.1
Traf1-201ENSMUST00000028234 NrkQ9R0G8 1455 aa21.86■■□□□ 1.09
Traf1-201ENSMUST00000028234 Shroom4Q1W617 1475 aa21.84■■□□□ 1.09
Traf1-201ENSMUST00000028234 PtprkP35822 1457 aa21.81■■□□□ 1.08
Traf1-201ENSMUST00000028234 Dnajc5bQ9CQ94 199 aa21.81■■□□□ 1.08
Traf1-201ENSMUST00000028234 Ubl4bQ9CQ84 188 aa21.8■■□□□ 1.08
Traf1-201ENSMUST00000028234 Grin2bQ01097 1482 aa21.8■■□□□ 1.08
Traf1-201ENSMUST00000028234 Cux2P70298 1426 aa21.79■■□□□ 1.08
Traf1-201ENSMUST00000028234 Arhgap35Q91YM2 1499 aa21.79■■□□□ 1.08
Traf1-201ENSMUST00000028234 Map3k1P53349 1493 aa21.71■■□□□ 1.07
Traf1-201ENSMUST00000028234 Npm1Q61937 292 aaKnown RBP21.68■■□□□ 1.06
Traf1-201ENSMUST00000028234 Clip1Q922J3 1391 aa21.67■■□□□ 1.06
Traf1-201ENSMUST00000028234 Mier1Q5UAK0 511 aa21.62■■□□□ 1.05
Traf1-201ENSMUST00000028234 Zeb1Q64318 1117 aa21.61■■□□□ 1.05
Traf1-201ENSMUST00000028234 Baz1bQ9Z277 1479 aa21.61■■□□□ 1.05
Traf1-201ENSMUST00000028234 Mroh2bQ7M6Y6 1581 aa21.59■■□□□ 1.05
Traf1-201ENSMUST00000028234 LrpprcQ6PB66 1392 aaKnown RBP21.58■■□□□ 1.04
Traf1-201ENSMUST00000028234 UbtfP25976 765 aaKnown RBP21.57■■□□□ 1.04
Traf1-201ENSMUST00000028234 Eea1Q8BL66 1411 aa21.57■■□□□ 1.04
Traf1-201ENSMUST00000028234 NefmP08553 848 aa21.55■■□□□ 1.04
Traf1-201ENSMUST00000028234 Efcab5A0JP43 1406 aa21.55■■□□□ 1.04
Traf1-201ENSMUST00000028234 PogzQ8BZH4 1409 aaKnown RBP21.55■■□□□ 1.04
Traf1-201ENSMUST00000028234 AqrQ8CFQ3 1481 aaKnown RBP21.52■■□□□ 1.04
Traf1-201ENSMUST00000028234 Duox2A2AQ99 1517 aa21.51■■□□□ 1.03
Traf1-201ENSMUST00000028234 Arap1Q4LDD4 1452 aa21.46■■□□□ 1.03
Traf1-201ENSMUST00000028234 Setd5Q5XJV7 1441 aa21.46■■□□□ 1.03
Traf1-201ENSMUST00000028234 Erich3F6QRE9 1637 aa21.45■■□□□ 1.02
Traf1-201ENSMUST00000028234 Mrc2Q64449 1479 aa21.44■■□□□ 1.02
Traf1-201ENSMUST00000028234 Plekhg3Q4VAC9 1341 aa21.44■■□□□ 1.02
Traf1-201ENSMUST00000028234 Arhgef5E9Q7D5 1581 aa21.43■■□□□ 1.02
Traf1-201ENSMUST00000028234 Dhx29Q6PGC1 1365 aaKnown RBP21.42■■□□□ 1.02
Traf1-201ENSMUST00000028234 Ankrd26Q811D2 1581 aa21.4■■□□□ 1.02
Traf1-201ENSMUST00000028234 Kif21aQ9QXL2 1672 aa21.4■■□□□ 1.02
Traf1-201ENSMUST00000028234 Samd9lQ69Z37 1561 aa21.39■■□□□ 1.02
Traf1-201ENSMUST00000028234 Crocc2F6XLV1 1638 aa21.39■■□□□ 1.01
Traf1-201ENSMUST00000028234 Carmil1Q6EDY6 1374 aa21.38■■□□□ 1.01
Traf1-201ENSMUST00000028234 SynmQ70IV5 1561 aa21.37■■□□□ 1.01
Traf1-201ENSMUST00000028234 Ap3b1Q9Z1T1 1105 aa21.33■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 172.5 ms