RNA–Protein interactions for RNA: ENSMUST00000028062.7

Vim-201, Transcript of Vimentin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Vim, Length 2,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-201ENSMUST00000028062 NischQ80TM9 1593 aa32.36■■■□□ 2.77
Vim-201ENSMUST00000028062 Gm35339A0A140LHH9 1649 aa32.04■■■□□ 2.72
Vim-201ENSMUST00000028062 Abcc9P70170 1546 aa31.49■■■□□ 2.63
Vim-201ENSMUST00000028062 Abcc8B2RUS7 1588 aa30.82■■■□□ 2.52
Vim-201ENSMUST00000028062 Rhox8Q6VSS7 320 aa29.59■■■□□ 2.33
Vim-201ENSMUST00000028062 Rtl1Q7M732 1744 aa29.42■■■□□ 2.3
Vim-201ENSMUST00000028062 Dcaf1Q80TR8 1506 aa28.86■■■□□ 2.21
Vim-201ENSMUST00000028062 Ccdc180J3QNE4 1664 aa28.77■■■□□ 2.2
Vim-201ENSMUST00000028062 ScribQ80U72 1612 aa28.77■■■□□ 2.2
Vim-201ENSMUST00000028062 Rb1cc1Q9ESK9 1588 aa28.34■■■□□ 2.13
Vim-201ENSMUST00000028062 Zcchc6Q5BLK4 1491 aaKnown RBP28.33■■■□□ 2.13
Vim-201ENSMUST00000028062 Kdm5dQ62240 1548 aa28.2■■■□□ 2.11
Vim-201ENSMUST00000028062 Baz1aO88379 1555 aa28.06■■■□□ 2.08
Vim-201ENSMUST00000028062 NacadQ5SWP3 1504 aa28.04■■■□□ 2.08
Vim-201ENSMUST00000028062 Crybg2B7ZCC2 1516 aa27.69■■■□□ 2.02
Vim-201ENSMUST00000028062 Ccdc136Q3TVA9 1136 aa27.44■■□□□ 1.98
Vim-201ENSMUST00000028062 Sycp2Q9CUU3 1500 aa27.43■■□□□ 1.98
Vim-201ENSMUST00000028062 Smarca2Q6DIC0 1577 aa27.42■■□□□ 1.98
Vim-201ENSMUST00000028062 HrcG5E8J6 738 aa27.42■■□□□ 1.98
Vim-201ENSMUST00000028062 Trim41Q5NCC3 630 aa27.07■■□□□ 1.92
Vim-201ENSMUST00000028062 BicraF8VPZ9 1578 aa26.8■■□□□ 1.88
Vim-201ENSMUST00000028062 Rpgrip1Q9EPQ2 1331 aa26.78■■□□□ 1.88
Vim-201ENSMUST00000028062 Brd4Q9ESU6 1400 aaKnown RBP26.74■■□□□ 1.87
Vim-201ENSMUST00000028062 Cecr2E9Q2Z1 1453 aa26.68■■□□□ 1.86
Vim-201ENSMUST00000028062 Cep164Q5DU05 1446 aa26.66■■□□□ 1.86
Vim-201ENSMUST00000028062 Synj1Q8CHC4 1574 aa26.48■■□□□ 1.83
Vim-201ENSMUST00000028062 Acin1Q9JIX8 1338 aaKnown RBP26.42■■□□□ 1.82
Vim-201ENSMUST00000028062 Golga3P55937 1487 aa26.4■■□□□ 1.82
Vim-201ENSMUST00000028062 CftrP26361 1476 aa26.36■■□□□ 1.81
Vim-201ENSMUST00000028062 Rsf1E9PWW9 1441 aaKnown RBP26.31■■□□□ 1.8
Vim-201ENSMUST00000028062 Cngb1E1AZ71 1325 aa26.28■■□□□ 1.8
Vim-201ENSMUST00000028062 Cttnbp2B9EJA2 1648 aa26.26■■□□□ 1.79
Vim-201ENSMUST00000028062 Smarca4Q3TKT4 1613 aaKnown RBP26.22■■□□□ 1.79
Vim-201ENSMUST00000028062 Chic1Q8CBW7 227 aa26.17■■□□□ 1.78
Vim-201ENSMUST00000028062 Ehmt2Q9Z148 1263 aaKnown RBP26.17■■□□□ 1.78
Vim-201ENSMUST00000028062 Top2bQ64511 1612 aa26.16■■□□□ 1.78
Vim-201ENSMUST00000028062 Ccdc88bQ4QRL3 1481 aa26.15■■□□□ 1.78
Vim-201ENSMUST00000028062 Esf1Q3V1V3 845 aaKnown RBP26■■□□□ 1.75
Vim-201ENSMUST00000028062 Iqgap2Q3UQ44 1575 aa25.85■■□□□ 1.73
Vim-201ENSMUST00000028062 Gab3Q8BSM5 595 aa25.82■■□□□ 1.72
Vim-201ENSMUST00000028062 Cc2d2aQ8CFW7 1633 aa25.8■■□□□ 1.72
Vim-201ENSMUST00000028062 Atad2bE9Q166 1460 aaKnown RBP25.78■■□□□ 1.72
Vim-201ENSMUST00000028062 Fmn1Q05860 1466 aa25.76■■□□□ 1.71
Vim-201ENSMUST00000028062 Pds5bQ4VA53 1446 aaKnown RBP25.67■■□□□ 1.7
Vim-201ENSMUST00000028062 Top2aQ01320 1528 aaKnown RBP25.62■■□□□ 1.69
Vim-201ENSMUST00000028062 Rapgef2Q8CHG7 1496 aa25.55■■□□□ 1.68
Vim-201ENSMUST00000028062 TnnQ80Z71 1560 aa25.41■■□□□ 1.66
Vim-201ENSMUST00000028062 Wdr62Q3U3T8 1523 aa25.37■■□□□ 1.65
Vim-201ENSMUST00000028062 Frmpd1A2AKB4 1549 aa25.34■■□□□ 1.65
Vim-201ENSMUST00000028062 Cep162Q6ZQ06 1403 aa25.3■■□□□ 1.64
Vim-201ENSMUST00000028062 Lamc3Q9R0B6 1581 aa25.2■■□□□ 1.62
Vim-201ENSMUST00000028062 Eif4g1Q6NZJ6 1600 aaKnown RBP25.19■■□□□ 1.62
Vim-201ENSMUST00000028062 Ercc6F8VPZ5 1481 aa25.17■■□□□ 1.62
Vim-201ENSMUST00000028062 Mier1Q5UAK0 511 aa25.1■■□□□ 1.61
Vim-201ENSMUST00000028062 NefmP08553 848 aa25.09■■□□□ 1.61
Vim-201ENSMUST00000028062 Pcgf6Q99NA9 353 aa25.07■■□□□ 1.6
Vim-201ENSMUST00000028062 Unc13aQ4KUS2 1712 aa25.07■■□□□ 1.6
Vim-201ENSMUST00000028062 Npm2Q80W85 207 aa25.02■■□□□ 1.6
Vim-201ENSMUST00000028062 NrkQ9R0G8 1455 aa24.99■■□□□ 1.59
Vim-201ENSMUST00000028062 Kif15Q6P9L6 1387 aa24.98■■□□□ 1.59
Vim-201ENSMUST00000028062 Myt1lP97500 1187 aa24.95■■□□□ 1.59
Vim-201ENSMUST00000028062 Camsap1A2AHC3 1581 aa24.94■■□□□ 1.58
Vim-201ENSMUST00000028062 Arhgap35Q91YM2 1499 aa24.92■■□□□ 1.58
Vim-201ENSMUST00000028062 PtprkP35822 1457 aa24.89■■□□□ 1.58
Vim-201ENSMUST00000028062 Shroom4Q1W617 1475 aa24.86■■□□□ 1.57
Vim-201ENSMUST00000028062 Clip1Q922J3 1391 aa24.85■■□□□ 1.57
Vim-201ENSMUST00000028062 Thoc2B1AZI6 1594 aaKnown RBP24.84■■□□□ 1.57
Vim-201ENSMUST00000028062 UbtfP25976 765 aaKnown RBP24.81■■□□□ 1.56
Vim-201ENSMUST00000028062 Map3k1P53349 1493 aa24.8■■□□□ 1.56
Vim-201ENSMUST00000028062 Ccdc18Q640L5 1455 aa24.8■■□□□ 1.56
Vim-201ENSMUST00000028062 Phldb1Q6PDH0 1371 aaKnown RBP24.8■■□□□ 1.56
Vim-201ENSMUST00000028062 Grin2bQ01097 1482 aa24.76■■□□□ 1.55
Vim-201ENSMUST00000028062 Supt5hO55201 1082 aaKnown RBP24.75■■□□□ 1.55
Vim-201ENSMUST00000028062 Il27Q8K3I6 234 aa24.71■■□□□ 1.55
Vim-201ENSMUST00000028062 Eea1Q8BL66 1411 aa24.68■■□□□ 1.54
Vim-201ENSMUST00000028062 Mroh2bQ7M6Y6 1581 aa24.62■■□□□ 1.53
Vim-201ENSMUST00000028062 Fam135aQ6NS59 1506 aa24.62■■□□□ 1.53
Vim-201ENSMUST00000028062 Arap1Q4LDD4 1452 aa24.62■■□□□ 1.53
Vim-201ENSMUST00000028062 Zeb1Q64318 1117 aa24.6■■□□□ 1.53
Vim-201ENSMUST00000028062 Cux2P70298 1426 aa24.6■■□□□ 1.53
Vim-201ENSMUST00000028062 Arhgef5E9Q7D5 1581 aa24.57■■□□□ 1.52
Vim-201ENSMUST00000028062 AqrQ8CFQ3 1481 aaKnown RBP24.56■■□□□ 1.52
Vim-201ENSMUST00000028062 Plekhg3Q4VAC9 1341 aa24.55■■□□□ 1.52
Vim-201ENSMUST00000028062 Ncapd3Q6ZQK0 1506 aa24.54■■□□□ 1.52
Vim-201ENSMUST00000028062 Setd5Q5XJV7 1441 aa24.53■■□□□ 1.52
Vim-201ENSMUST00000028062 Ubl4bQ9CQ84 188 aa24.52■■□□□ 1.52
Vim-201ENSMUST00000028062 Efcab5A0JP43 1406 aa24.51■■□□□ 1.51
Vim-201ENSMUST00000028062 Baz1bQ9Z277 1479 aa24.51■■□□□ 1.51
Vim-201ENSMUST00000028062 Erich3F6QRE9 1637 aa24.5■■□□□ 1.51
Vim-201ENSMUST00000028062 Npm1Q61937 292 aaKnown RBP24.44■■□□□ 1.5
Vim-201ENSMUST00000028062 LrpprcQ6PB66 1392 aaKnown RBP24.44■■□□□ 1.5
Vim-201ENSMUST00000028062 Ankrd26Q811D2 1581 aa24.43■■□□□ 1.5
Vim-201ENSMUST00000028062 PogzQ8BZH4 1409 aaKnown RBP24.43■■□□□ 1.5
Vim-201ENSMUST00000028062 Tiam1Q60610 1591 aa24.42■■□□□ 1.5
Vim-201ENSMUST00000028062 Duox2A2AQ99 1517 aa24.37■■□□□ 1.49
Vim-201ENSMUST00000028062 Carmil1Q6EDY6 1374 aa24.36■■□□□ 1.49
Vim-201ENSMUST00000028062 Las1lA2BE28 776 aaKnown RBP24.35■■□□□ 1.49
Vim-201ENSMUST00000028062 Naip1Q9QWK5 1403 aa24.32■■□□□ 1.48
Vim-201ENSMUST00000028062 Pcf11G3X9Z4 1553 aa24.29■■□□□ 1.48
Vim-201ENSMUST00000028062 Lmo7E9PYF4 1699 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms