RNA–Protein interactions for RNA: ENSMUST00000028062.7

Vim-201, Transcript of Vimentin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Vim, Length 2,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-201ENSMUST00000028062 NischQ80TM9 1593 aa32.36■■■□□ 2.77
Vim-201ENSMUST00000028062 Gm35339A0A140LHH9 1649 aa32.04■■■□□ 2.72
Vim-201ENSMUST00000028062 Abcc9P70170 1546 aa31.49■■■□□ 2.63
Vim-201ENSMUST00000028062 Abcc8B2RUS7 1588 aa30.82■■■□□ 2.52
Vim-201ENSMUST00000028062 Rhox8Q6VSS7 320 aa29.59■■■□□ 2.33
Vim-201ENSMUST00000028062 Rtl1Q7M732 1744 aa29.42■■■□□ 2.3
Vim-201ENSMUST00000028062 Dcaf1Q80TR8 1506 aa28.86■■■□□ 2.21
Vim-201ENSMUST00000028062 Ccdc180J3QNE4 1664 aa28.77■■■□□ 2.2
Vim-201ENSMUST00000028062 ScribQ80U72 1612 aa28.77■■■□□ 2.2
Vim-201ENSMUST00000028062 Rb1cc1Q9ESK9 1588 aa28.34■■■□□ 2.13
Vim-201ENSMUST00000028062 Zcchc6Q5BLK4 1491 aaKnown RBP28.33■■■□□ 2.13
Vim-201ENSMUST00000028062 Kdm5dQ62240 1548 aa28.2■■■□□ 2.11
Vim-201ENSMUST00000028062 Baz1aO88379 1555 aa28.06■■■□□ 2.08
Vim-201ENSMUST00000028062 NacadQ5SWP3 1504 aa28.04■■■□□ 2.08
Vim-201ENSMUST00000028062 Crybg2B7ZCC2 1516 aa27.69■■■□□ 2.02
Vim-201ENSMUST00000028062 Ccdc136Q3TVA9 1136 aa27.44■■□□□ 1.98
Vim-201ENSMUST00000028062 Sycp2Q9CUU3 1500 aa27.43■■□□□ 1.98
Vim-201ENSMUST00000028062 Smarca2Q6DIC0 1577 aa27.42■■□□□ 1.98
Vim-201ENSMUST00000028062 HrcG5E8J6 738 aa27.42■■□□□ 1.98
Vim-201ENSMUST00000028062 Trim41Q5NCC3 630 aa27.07■■□□□ 1.92
Vim-201ENSMUST00000028062 BicraF8VPZ9 1578 aa26.8■■□□□ 1.88
Vim-201ENSMUST00000028062 Rpgrip1Q9EPQ2 1331 aa26.78■■□□□ 1.88
Vim-201ENSMUST00000028062 Brd4Q9ESU6 1400 aaKnown RBP26.74■■□□□ 1.87
Vim-201ENSMUST00000028062 Cecr2E9Q2Z1 1453 aa26.68■■□□□ 1.86
Vim-201ENSMUST00000028062 Cep164Q5DU05 1446 aa26.66■■□□□ 1.86
Vim-201ENSMUST00000028062 Synj1Q8CHC4 1574 aa26.48■■□□□ 1.83
Vim-201ENSMUST00000028062 Acin1Q9JIX8 1338 aaKnown RBP26.42■■□□□ 1.82
Vim-201ENSMUST00000028062 Golga3P55937 1487 aa26.4■■□□□ 1.82
Vim-201ENSMUST00000028062 CftrP26361 1476 aa26.36■■□□□ 1.81
Vim-201ENSMUST00000028062 Rsf1E9PWW9 1441 aaKnown RBP26.31■■□□□ 1.8
Vim-201ENSMUST00000028062 Cngb1E1AZ71 1325 aa26.28■■□□□ 1.8
Vim-201ENSMUST00000028062 Cttnbp2B9EJA2 1648 aa26.26■■□□□ 1.79
Vim-201ENSMUST00000028062 Smarca4Q3TKT4 1613 aaKnown RBP26.22■■□□□ 1.79
Vim-201ENSMUST00000028062 Chic1Q8CBW7 227 aa26.17■■□□□ 1.78
Vim-201ENSMUST00000028062 Ehmt2Q9Z148 1263 aaKnown RBP26.17■■□□□ 1.78
Vim-201ENSMUST00000028062 Top2bQ64511 1612 aa26.16■■□□□ 1.78
Vim-201ENSMUST00000028062 Ccdc88bQ4QRL3 1481 aa26.15■■□□□ 1.78
Vim-201ENSMUST00000028062 Esf1Q3V1V3 845 aaKnown RBP26■■□□□ 1.75
Vim-201ENSMUST00000028062 Iqgap2Q3UQ44 1575 aa25.85■■□□□ 1.73
Vim-201ENSMUST00000028062 Gab3Q8BSM5 595 aa25.82■■□□□ 1.72
Vim-201ENSMUST00000028062 Cc2d2aQ8CFW7 1633 aa25.8■■□□□ 1.72
Vim-201ENSMUST00000028062 Atad2bE9Q166 1460 aaKnown RBP25.78■■□□□ 1.72
Vim-201ENSMUST00000028062 Fmn1Q05860 1466 aa25.76■■□□□ 1.71
Vim-201ENSMUST00000028062 Pds5bQ4VA53 1446 aaKnown RBP25.67■■□□□ 1.7
Vim-201ENSMUST00000028062 Top2aQ01320 1528 aaKnown RBP25.62■■□□□ 1.69
Vim-201ENSMUST00000028062 Rapgef2Q8CHG7 1496 aa25.55■■□□□ 1.68
Vim-201ENSMUST00000028062 TnnQ80Z71 1560 aa25.41■■□□□ 1.66
Vim-201ENSMUST00000028062 Wdr62Q3U3T8 1523 aa25.37■■□□□ 1.65
Vim-201ENSMUST00000028062 Frmpd1A2AKB4 1549 aa25.34■■□□□ 1.65
Vim-201ENSMUST00000028062 Cep162Q6ZQ06 1403 aa25.3■■□□□ 1.64
Vim-201ENSMUST00000028062 Lamc3Q9R0B6 1581 aa25.2■■□□□ 1.62
Vim-201ENSMUST00000028062 Eif4g1Q6NZJ6 1600 aaKnown RBP25.19■■□□□ 1.62
Vim-201ENSMUST00000028062 Ercc6F8VPZ5 1481 aa25.17■■□□□ 1.62
Vim-201ENSMUST00000028062 Mier1Q5UAK0 511 aa25.1■■□□□ 1.61
Vim-201ENSMUST00000028062 NefmP08553 848 aa25.09■■□□□ 1.61
Vim-201ENSMUST00000028062 Pcgf6Q99NA9 353 aa25.07■■□□□ 1.6
Vim-201ENSMUST00000028062 Unc13aQ4KUS2 1712 aa25.07■■□□□ 1.6
Vim-201ENSMUST00000028062 Npm2Q80W85 207 aa25.02■■□□□ 1.6
Vim-201ENSMUST00000028062 NrkQ9R0G8 1455 aa24.99■■□□□ 1.59
Vim-201ENSMUST00000028062 Kif15Q6P9L6 1387 aa24.98■■□□□ 1.59
Vim-201ENSMUST00000028062 Myt1lP97500 1187 aa24.95■■□□□ 1.59
Vim-201ENSMUST00000028062 Camsap1A2AHC3 1581 aa24.94■■□□□ 1.58
Vim-201ENSMUST00000028062 Arhgap35Q91YM2 1499 aa24.92■■□□□ 1.58
Vim-201ENSMUST00000028062 PtprkP35822 1457 aa24.89■■□□□ 1.58
Vim-201ENSMUST00000028062 Shroom4Q1W617 1475 aa24.86■■□□□ 1.57
Vim-201ENSMUST00000028062 Clip1Q922J3 1391 aa24.85■■□□□ 1.57
Vim-201ENSMUST00000028062 Thoc2B1AZI6 1594 aaKnown RBP24.84■■□□□ 1.57
Vim-201ENSMUST00000028062 UbtfP25976 765 aaKnown RBP24.81■■□□□ 1.56
Vim-201ENSMUST00000028062 Map3k1P53349 1493 aa24.8■■□□□ 1.56
Vim-201ENSMUST00000028062 Ccdc18Q640L5 1455 aa24.8■■□□□ 1.56
Vim-201ENSMUST00000028062 Phldb1Q6PDH0 1371 aaKnown RBP24.8■■□□□ 1.56
Vim-201ENSMUST00000028062 Grin2bQ01097 1482 aa24.76■■□□□ 1.55
Vim-201ENSMUST00000028062 Supt5hO55201 1082 aaKnown RBP24.75■■□□□ 1.55
Vim-201ENSMUST00000028062 Il27Q8K3I6 234 aa24.71■■□□□ 1.55
Vim-201ENSMUST00000028062 Eea1Q8BL66 1411 aa24.68■■□□□ 1.54
Vim-201ENSMUST00000028062 Mroh2bQ7M6Y6 1581 aa24.62■■□□□ 1.53
Vim-201ENSMUST00000028062 Fam135aQ6NS59 1506 aa24.62■■□□□ 1.53
Vim-201ENSMUST00000028062 Arap1Q4LDD4 1452 aa24.62■■□□□ 1.53
Vim-201ENSMUST00000028062 Zeb1Q64318 1117 aa24.6■■□□□ 1.53
Vim-201ENSMUST00000028062 Cux2P70298 1426 aa24.6■■□□□ 1.53
Vim-201ENSMUST00000028062 Arhgef5E9Q7D5 1581 aa24.57■■□□□ 1.52
Vim-201ENSMUST00000028062 AqrQ8CFQ3 1481 aaKnown RBP24.56■■□□□ 1.52
Vim-201ENSMUST00000028062 Plekhg3Q4VAC9 1341 aa24.55■■□□□ 1.52
Vim-201ENSMUST00000028062 Ncapd3Q6ZQK0 1506 aa24.54■■□□□ 1.52
Vim-201ENSMUST00000028062 Setd5Q5XJV7 1441 aa24.53■■□□□ 1.52
Vim-201ENSMUST00000028062 Ubl4bQ9CQ84 188 aa24.52■■□□□ 1.52
Vim-201ENSMUST00000028062 Efcab5A0JP43 1406 aa24.51■■□□□ 1.51
Vim-201ENSMUST00000028062 Baz1bQ9Z277 1479 aa24.51■■□□□ 1.51
Vim-201ENSMUST00000028062 Erich3F6QRE9 1637 aa24.5■■□□□ 1.51
Vim-201ENSMUST00000028062 Npm1Q61937 292 aaKnown RBP24.44■■□□□ 1.5
Vim-201ENSMUST00000028062 LrpprcQ6PB66 1392 aaKnown RBP24.44■■□□□ 1.5
Vim-201ENSMUST00000028062 Ankrd26Q811D2 1581 aa24.43■■□□□ 1.5
Vim-201ENSMUST00000028062 PogzQ8BZH4 1409 aaKnown RBP24.43■■□□□ 1.5
Vim-201ENSMUST00000028062 Tiam1Q60610 1591 aa24.42■■□□□ 1.5
Vim-201ENSMUST00000028062 Duox2A2AQ99 1517 aa24.37■■□□□ 1.49
Vim-201ENSMUST00000028062 Carmil1Q6EDY6 1374 aa24.36■■□□□ 1.49
Vim-201ENSMUST00000028062 Las1lA2BE28 776 aaKnown RBP24.35■■□□□ 1.49
Vim-201ENSMUST00000028062 Naip1Q9QWK5 1403 aa24.32■■□□□ 1.48
Vim-201ENSMUST00000028062 Pcf11G3X9Z4 1553 aa24.29■■□□□ 1.48
Vim-201ENSMUST00000028062 Lmo7E9PYF4 1699 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 544.7 ms