RNA–Protein interactions for RNA: ENSMUST00000026826.13

Rab40c-201, Transcript of Ras-related protein Rab-40C, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab40c, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40c-201ENSMUST00000026826 NischQ80TM9 1593 aa49.45■■■■■ 5.51
Rab40c-201ENSMUST00000026826 Gm35339A0A140LHH9 1649 aa48.71■■■■■ 5.39
Rab40c-201ENSMUST00000026826 Abcc9P70170 1546 aa47.97■■■■■ 5.27
Rab40c-201ENSMUST00000026826 Abcc8B2RUS7 1588 aa46.97■■■■■ 5.11
Rab40c-201ENSMUST00000026826 Rhox8Q6VSS7 320 aa45.97■■■■■ 4.95
Rab40c-201ENSMUST00000026826 Rtl1Q7M732 1744 aa44.76■■■■■ 4.76
Rab40c-201ENSMUST00000026826 ScribQ80U72 1612 aa44.11■■■■■ 4.65
Rab40c-201ENSMUST00000026826 Ccdc180J3QNE4 1664 aa44.03■■■■■ 4.64
Rab40c-201ENSMUST00000026826 Dcaf1Q80TR8 1506 aa43.6■■■■■ 4.57
Rab40c-201ENSMUST00000026826 Zcchc6Q5BLK4 1491 aaKnown RBP43.49■■■■■ 4.55
Rab40c-201ENSMUST00000026826 Rb1cc1Q9ESK9 1588 aa43.34■■■■■ 4.53
Rab40c-201ENSMUST00000026826 Kdm5dQ62240 1548 aa43.15■■■■■ 4.5
Rab40c-201ENSMUST00000026826 NacadQ5SWP3 1504 aa42.77■■■■■ 4.44
Rab40c-201ENSMUST00000026826 Baz1aO88379 1555 aa42.76■■■■■ 4.44
Rab40c-201ENSMUST00000026826 Ccdc136Q3TVA9 1136 aa42.71■■■■■ 4.43
Rab40c-201ENSMUST00000026826 HrcG5E8J6 738 aa42.05■■■■■ 4.32
Rab40c-201ENSMUST00000026826 Sycp2Q9CUU3 1500 aa41.89■■■■■ 4.3
Rab40c-201ENSMUST00000026826 Crybg2B7ZCC2 1516 aa41.82■■■■■ 4.29
Rab40c-201ENSMUST00000026826 Smarca2Q6DIC0 1577 aa41.81■■■■■ 4.28
Rab40c-201ENSMUST00000026826 Trim41Q5NCC3 630 aa41.54■■■■■ 4.24
Rab40c-201ENSMUST00000026826 Ehmt2Q9Z148 1263 aaKnown RBP41.44■■■■■ 4.23
Rab40c-201ENSMUST00000026826 Rpgrip1Q9EPQ2 1331 aa41.27■■■■■ 4.2
Rab40c-201ENSMUST00000026826 BicraF8VPZ9 1578 aa41.1■■■■■ 4.17
Rab40c-201ENSMUST00000026826 Acin1Q9JIX8 1338 aaKnown RBP41.04■■■■■ 4.16
Rab40c-201ENSMUST00000026826 Cecr2E9Q2Z1 1453 aa41■■■■■ 4.15
Rab40c-201ENSMUST00000026826 Cep164Q5DU05 1446 aa40.91■■■■■ 4.14
Rab40c-201ENSMUST00000026826 Cngb1E1AZ71 1325 aa40.8■■■■■ 4.12
Rab40c-201ENSMUST00000026826 Brd4Q9ESU6 1400 aaKnown RBP40.79■■■■■ 4.12
Rab40c-201ENSMUST00000026826 Chic1Q8CBW7 227 aa40.62■■■■■ 4.09
Rab40c-201ENSMUST00000026826 Rsf1E9PWW9 1441 aaKnown RBP40.59■■■■■ 4.09
Rab40c-201ENSMUST00000026826 Synj1Q8CHC4 1574 aa40.58■■■■■ 4.09
Rab40c-201ENSMUST00000026826 Golga3P55937 1487 aa40.4■■■■■ 4.06
Rab40c-201ENSMUST00000026826 Ccdc88bQ4QRL3 1481 aa40.36■■■■■ 4.05
Rab40c-201ENSMUST00000026826 Gab3Q8BSM5 595 aa40.35■■■■■ 4.05
Rab40c-201ENSMUST00000026826 CftrP26361 1476 aa40.3■■■■■ 4.04
Rab40c-201ENSMUST00000026826 Esf1Q3V1V3 845 aaKnown RBP40.2■■■■■ 4.03
Rab40c-201ENSMUST00000026826 Smarca4Q3TKT4 1613 aaKnown RBP40■■■■□ 3.99
Rab40c-201ENSMUST00000026826 Cttnbp2B9EJA2 1648 aa39.98■■■■□ 3.99
Rab40c-201ENSMUST00000026826 Top2bQ64511 1612 aa39.91■■■■□ 3.98
Rab40c-201ENSMUST00000026826 Cc2d2aQ8CFW7 1633 aa39.66■■■■□ 3.94
Rab40c-201ENSMUST00000026826 Iqgap2Q3UQ44 1575 aa39.53■■■■□ 3.92
Rab40c-201ENSMUST00000026826 Atad2bE9Q166 1460 aaKnown RBP39.36■■■■□ 3.89
Rab40c-201ENSMUST00000026826 Pcgf6Q99NA9 353 aa39.3■■■■□ 3.88
Rab40c-201ENSMUST00000026826 Fmn1Q05860 1466 aa39.3■■■■□ 3.88
Rab40c-201ENSMUST00000026826 Pds5bQ4VA53 1446 aaKnown RBP39.23■■■■□ 3.87
Rab40c-201ENSMUST00000026826 Top2aQ01320 1528 aaKnown RBP39.16■■■■□ 3.86
Rab40c-201ENSMUST00000026826 Rapgef2Q8CHG7 1496 aa39.14■■■■□ 3.86
Rab40c-201ENSMUST00000026826 Mier1Q5UAK0 511 aa39.07■■■■□ 3.84
Rab40c-201ENSMUST00000026826 Myt1lP97500 1187 aa38.89■■■■□ 3.82
Rab40c-201ENSMUST00000026826 Supt5hO55201 1082 aaKnown RBP38.88■■■■□ 3.82
Rab40c-201ENSMUST00000026826 Cep162Q6ZQ06 1403 aa38.87■■■■□ 3.81
Rab40c-201ENSMUST00000026826 Frmpd1A2AKB4 1549 aa38.81■■■■□ 3.8
Rab40c-201ENSMUST00000026826 Wdr62Q3U3T8 1523 aa38.79■■■■□ 3.8
Rab40c-201ENSMUST00000026826 Npm2Q80W85 207 aa38.74■■■■□ 3.79
Rab40c-201ENSMUST00000026826 UbtfP25976 765 aaKnown RBP38.72■■■■□ 3.79
Rab40c-201ENSMUST00000026826 NefmP08553 848 aa38.69■■■■□ 3.78
Rab40c-201ENSMUST00000026826 Zeb1Q64318 1117 aa38.69■■■■□ 3.78
Rab40c-201ENSMUST00000026826 TnnQ80Z71 1560 aa38.63■■■■□ 3.78
Rab40c-201ENSMUST00000026826 Ercc6F8VPZ5 1481 aa38.57■■■■□ 3.76
Rab40c-201ENSMUST00000026826 Unc13aQ4KUS2 1712 aa38.5■■■■□ 3.75
Rab40c-201ENSMUST00000026826 Eif4g1Q6NZJ6 1600 aaKnown RBP38.46■■■■□ 3.75
Rab40c-201ENSMUST00000026826 Il27Q8K3I6 234 aa38.39■■■■□ 3.74
Rab40c-201ENSMUST00000026826 PtprkP35822 1457 aa38.34■■■■□ 3.73
Rab40c-201ENSMUST00000026826 Lamc3Q9R0B6 1581 aa38.34■■■■□ 3.73
Rab40c-201ENSMUST00000026826 Kif15Q6P9L6 1387 aa38.32■■■■□ 3.73
Rab40c-201ENSMUST00000026826 Clip1Q922J3 1391 aa38.32■■■■□ 3.72
Rab40c-201ENSMUST00000026826 Plekhg3Q4VAC9 1341 aa38.25■■■■□ 3.71
Rab40c-201ENSMUST00000026826 Arhgap35Q91YM2 1499 aa38.24■■■■□ 3.71
Rab40c-201ENSMUST00000026826 Thoc2B1AZI6 1594 aaKnown RBP38.17■■■■□ 3.7
Rab40c-201ENSMUST00000026826 NrkQ9R0G8 1455 aa38.12■■■■□ 3.69
Rab40c-201ENSMUST00000026826 Camsap1A2AHC3 1581 aa38.07■■■■□ 3.69
Rab40c-201ENSMUST00000026826 Sall2Q9QX96 1004 aa38.02■■■■□ 3.68
Rab40c-201ENSMUST00000026826 Shroom4Q1W617 1475 aa37.99■■■■□ 3.67
Rab40c-201ENSMUST00000026826 Phldb1Q6PDH0 1371 aaKnown RBP37.94■■■■□ 3.66
Rab40c-201ENSMUST00000026826 Ap3b1Q9Z1T1 1105 aa37.93■■■■□ 3.66
Rab40c-201ENSMUST00000026826 Arap1Q4LDD4 1452 aa37.9■■■■□ 3.66
Rab40c-201ENSMUST00000026826 Eea1Q8BL66 1411 aa37.87■■■■□ 3.65
Rab40c-201ENSMUST00000026826 Ccdc18Q640L5 1455 aa37.85■■■■□ 3.65
Rab40c-201ENSMUST00000026826 Grin2bQ01097 1482 aa37.84■■■■□ 3.65
Rab40c-201ENSMUST00000026826 Setd5Q5XJV7 1441 aa37.77■■■■□ 3.64
Rab40c-201ENSMUST00000026826 Ncapd3Q6ZQK0 1506 aa37.77■■■■□ 3.64
Rab40c-201ENSMUST00000026826 Las1lA2BE28 776 aaKnown RBP37.77■■■■□ 3.64
Rab40c-201ENSMUST00000026826 Aebp2Q9Z248 504 aaKnown RBP37.76■■■■□ 3.64
Rab40c-201ENSMUST00000026826 Map3k1P53349 1493 aa37.74■■■■□ 3.63
Rab40c-201ENSMUST00000026826 Ubl4bQ9CQ84 188 aa37.72■■■■□ 3.63
Rab40c-201ENSMUST00000026826 Cux2P70298 1426 aa37.69■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Fam135aQ6NS59 1506 aa37.68■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Arhgef5E9Q7D5 1581 aa37.67■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Wdr66E9Q743 1299 aa37.67■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Neurod1Q60867 357 aa37.65■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Baz1bQ9Z277 1479 aa37.65■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Mroh2bQ7M6Y6 1581 aa37.65■■■■□ 3.62
Rab40c-201ENSMUST00000026826 TonslQ6NZL6 1363 aa37.53■■■■□ 3.6
Rab40c-201ENSMUST00000026826 Npm1Q61937 292 aaKnown RBP37.52■■■■□ 3.6
Rab40c-201ENSMUST00000026826 Ankrd26Q811D2 1581 aa37.45■■■■□ 3.59
Rab40c-201ENSMUST00000026826 Ppargc1bQ8VHJ7 1014 aa37.43■■■■□ 3.58
Rab40c-201ENSMUST00000026826 Tiam1Q60610 1591 aa37.42■■■■□ 3.58
Rab40c-201ENSMUST00000026826 AqrQ8CFQ3 1481 aaKnown RBP37.42■■■■□ 3.58
Rab40c-201ENSMUST00000026826 Naip1Q9QWK5 1403 aa37.36■■■■□ 3.57
Rab40c-201ENSMUST00000026826 LrpprcQ6PB66 1392 aaKnown RBP37.36■■■■□ 3.57
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms