RNA–Protein interactions for RNA: ENSMUST00000026826.13

Rab40c-201, Transcript of Ras-related protein Rab-40C, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab40c, Length 2,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40c-201ENSMUST00000026826 NischQ80TM9 1593 aa49.45■■■■■ 5.51
Rab40c-201ENSMUST00000026826 Gm35339A0A140LHH9 1649 aa48.71■■■■■ 5.39
Rab40c-201ENSMUST00000026826 Abcc9P70170 1546 aa47.97■■■■■ 5.27
Rab40c-201ENSMUST00000026826 Abcc8B2RUS7 1588 aa46.97■■■■■ 5.11
Rab40c-201ENSMUST00000026826 Rhox8Q6VSS7 320 aa45.97■■■■■ 4.95
Rab40c-201ENSMUST00000026826 Rtl1Q7M732 1744 aa44.76■■■■■ 4.76
Rab40c-201ENSMUST00000026826 ScribQ80U72 1612 aa44.11■■■■■ 4.65
Rab40c-201ENSMUST00000026826 Ccdc180J3QNE4 1664 aa44.03■■■■■ 4.64
Rab40c-201ENSMUST00000026826 Dcaf1Q80TR8 1506 aa43.6■■■■■ 4.57
Rab40c-201ENSMUST00000026826 Zcchc6Q5BLK4 1491 aaKnown RBP43.49■■■■■ 4.55
Rab40c-201ENSMUST00000026826 Rb1cc1Q9ESK9 1588 aa43.34■■■■■ 4.53
Rab40c-201ENSMUST00000026826 Kdm5dQ62240 1548 aa43.15■■■■■ 4.5
Rab40c-201ENSMUST00000026826 NacadQ5SWP3 1504 aa42.77■■■■■ 4.44
Rab40c-201ENSMUST00000026826 Baz1aO88379 1555 aa42.76■■■■■ 4.44
Rab40c-201ENSMUST00000026826 Ccdc136Q3TVA9 1136 aa42.71■■■■■ 4.43
Rab40c-201ENSMUST00000026826 HrcG5E8J6 738 aa42.05■■■■■ 4.32
Rab40c-201ENSMUST00000026826 Sycp2Q9CUU3 1500 aa41.89■■■■■ 4.3
Rab40c-201ENSMUST00000026826 Crybg2B7ZCC2 1516 aa41.82■■■■■ 4.29
Rab40c-201ENSMUST00000026826 Smarca2Q6DIC0 1577 aa41.81■■■■■ 4.28
Rab40c-201ENSMUST00000026826 Trim41Q5NCC3 630 aa41.54■■■■■ 4.24
Rab40c-201ENSMUST00000026826 Ehmt2Q9Z148 1263 aaKnown RBP41.44■■■■■ 4.23
Rab40c-201ENSMUST00000026826 Rpgrip1Q9EPQ2 1331 aa41.27■■■■■ 4.2
Rab40c-201ENSMUST00000026826 BicraF8VPZ9 1578 aa41.1■■■■■ 4.17
Rab40c-201ENSMUST00000026826 Acin1Q9JIX8 1338 aaKnown RBP41.04■■■■■ 4.16
Rab40c-201ENSMUST00000026826 Cecr2E9Q2Z1 1453 aa41■■■■■ 4.15
Rab40c-201ENSMUST00000026826 Cep164Q5DU05 1446 aa40.91■■■■■ 4.14
Rab40c-201ENSMUST00000026826 Cngb1E1AZ71 1325 aa40.8■■■■■ 4.12
Rab40c-201ENSMUST00000026826 Brd4Q9ESU6 1400 aaKnown RBP40.79■■■■■ 4.12
Rab40c-201ENSMUST00000026826 Chic1Q8CBW7 227 aa40.62■■■■■ 4.09
Rab40c-201ENSMUST00000026826 Rsf1E9PWW9 1441 aaKnown RBP40.59■■■■■ 4.09
Rab40c-201ENSMUST00000026826 Synj1Q8CHC4 1574 aa40.58■■■■■ 4.09
Rab40c-201ENSMUST00000026826 Golga3P55937 1487 aa40.4■■■■■ 4.06
Rab40c-201ENSMUST00000026826 Ccdc88bQ4QRL3 1481 aa40.36■■■■■ 4.05
Rab40c-201ENSMUST00000026826 Gab3Q8BSM5 595 aa40.35■■■■■ 4.05
Rab40c-201ENSMUST00000026826 CftrP26361 1476 aa40.3■■■■■ 4.04
Rab40c-201ENSMUST00000026826 Esf1Q3V1V3 845 aaKnown RBP40.2■■■■■ 4.03
Rab40c-201ENSMUST00000026826 Smarca4Q3TKT4 1613 aaKnown RBP40■■■■□ 3.99
Rab40c-201ENSMUST00000026826 Cttnbp2B9EJA2 1648 aa39.98■■■■□ 3.99
Rab40c-201ENSMUST00000026826 Top2bQ64511 1612 aa39.91■■■■□ 3.98
Rab40c-201ENSMUST00000026826 Cc2d2aQ8CFW7 1633 aa39.66■■■■□ 3.94
Rab40c-201ENSMUST00000026826 Iqgap2Q3UQ44 1575 aa39.53■■■■□ 3.92
Rab40c-201ENSMUST00000026826 Atad2bE9Q166 1460 aaKnown RBP39.36■■■■□ 3.89
Rab40c-201ENSMUST00000026826 Pcgf6Q99NA9 353 aa39.3■■■■□ 3.88
Rab40c-201ENSMUST00000026826 Fmn1Q05860 1466 aa39.3■■■■□ 3.88
Rab40c-201ENSMUST00000026826 Pds5bQ4VA53 1446 aaKnown RBP39.23■■■■□ 3.87
Rab40c-201ENSMUST00000026826 Top2aQ01320 1528 aaKnown RBP39.16■■■■□ 3.86
Rab40c-201ENSMUST00000026826 Rapgef2Q8CHG7 1496 aa39.14■■■■□ 3.86
Rab40c-201ENSMUST00000026826 Mier1Q5UAK0 511 aa39.07■■■■□ 3.84
Rab40c-201ENSMUST00000026826 Myt1lP97500 1187 aa38.89■■■■□ 3.82
Rab40c-201ENSMUST00000026826 Supt5hO55201 1082 aaKnown RBP38.88■■■■□ 3.82
Rab40c-201ENSMUST00000026826 Cep162Q6ZQ06 1403 aa38.87■■■■□ 3.81
Rab40c-201ENSMUST00000026826 Frmpd1A2AKB4 1549 aa38.81■■■■□ 3.8
Rab40c-201ENSMUST00000026826 Wdr62Q3U3T8 1523 aa38.79■■■■□ 3.8
Rab40c-201ENSMUST00000026826 Npm2Q80W85 207 aa38.74■■■■□ 3.79
Rab40c-201ENSMUST00000026826 UbtfP25976 765 aaKnown RBP38.72■■■■□ 3.79
Rab40c-201ENSMUST00000026826 NefmP08553 848 aa38.69■■■■□ 3.78
Rab40c-201ENSMUST00000026826 Zeb1Q64318 1117 aa38.69■■■■□ 3.78
Rab40c-201ENSMUST00000026826 TnnQ80Z71 1560 aa38.63■■■■□ 3.78
Rab40c-201ENSMUST00000026826 Ercc6F8VPZ5 1481 aa38.57■■■■□ 3.76
Rab40c-201ENSMUST00000026826 Unc13aQ4KUS2 1712 aa38.5■■■■□ 3.75
Rab40c-201ENSMUST00000026826 Eif4g1Q6NZJ6 1600 aaKnown RBP38.46■■■■□ 3.75
Rab40c-201ENSMUST00000026826 Il27Q8K3I6 234 aa38.39■■■■□ 3.74
Rab40c-201ENSMUST00000026826 PtprkP35822 1457 aa38.34■■■■□ 3.73
Rab40c-201ENSMUST00000026826 Lamc3Q9R0B6 1581 aa38.34■■■■□ 3.73
Rab40c-201ENSMUST00000026826 Kif15Q6P9L6 1387 aa38.32■■■■□ 3.73
Rab40c-201ENSMUST00000026826 Clip1Q922J3 1391 aa38.32■■■■□ 3.72
Rab40c-201ENSMUST00000026826 Plekhg3Q4VAC9 1341 aa38.25■■■■□ 3.71
Rab40c-201ENSMUST00000026826 Arhgap35Q91YM2 1499 aa38.24■■■■□ 3.71
Rab40c-201ENSMUST00000026826 Thoc2B1AZI6 1594 aaKnown RBP38.17■■■■□ 3.7
Rab40c-201ENSMUST00000026826 NrkQ9R0G8 1455 aa38.12■■■■□ 3.69
Rab40c-201ENSMUST00000026826 Camsap1A2AHC3 1581 aa38.07■■■■□ 3.69
Rab40c-201ENSMUST00000026826 Sall2Q9QX96 1004 aa38.02■■■■□ 3.68
Rab40c-201ENSMUST00000026826 Shroom4Q1W617 1475 aa37.99■■■■□ 3.67
Rab40c-201ENSMUST00000026826 Phldb1Q6PDH0 1371 aaKnown RBP37.94■■■■□ 3.66
Rab40c-201ENSMUST00000026826 Ap3b1Q9Z1T1 1105 aa37.93■■■■□ 3.66
Rab40c-201ENSMUST00000026826 Arap1Q4LDD4 1452 aa37.9■■■■□ 3.66
Rab40c-201ENSMUST00000026826 Eea1Q8BL66 1411 aa37.87■■■■□ 3.65
Rab40c-201ENSMUST00000026826 Ccdc18Q640L5 1455 aa37.85■■■■□ 3.65
Rab40c-201ENSMUST00000026826 Grin2bQ01097 1482 aa37.84■■■■□ 3.65
Rab40c-201ENSMUST00000026826 Setd5Q5XJV7 1441 aa37.77■■■■□ 3.64
Rab40c-201ENSMUST00000026826 Ncapd3Q6ZQK0 1506 aa37.77■■■■□ 3.64
Rab40c-201ENSMUST00000026826 Las1lA2BE28 776 aaKnown RBP37.77■■■■□ 3.64
Rab40c-201ENSMUST00000026826 Aebp2Q9Z248 504 aaKnown RBP37.76■■■■□ 3.64
Rab40c-201ENSMUST00000026826 Map3k1P53349 1493 aa37.74■■■■□ 3.63
Rab40c-201ENSMUST00000026826 Ubl4bQ9CQ84 188 aa37.72■■■■□ 3.63
Rab40c-201ENSMUST00000026826 Cux2P70298 1426 aa37.69■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Fam135aQ6NS59 1506 aa37.68■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Arhgef5E9Q7D5 1581 aa37.67■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Wdr66E9Q743 1299 aa37.67■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Neurod1Q60867 357 aa37.65■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Baz1bQ9Z277 1479 aa37.65■■■■□ 3.62
Rab40c-201ENSMUST00000026826 Mroh2bQ7M6Y6 1581 aa37.65■■■■□ 3.62
Rab40c-201ENSMUST00000026826 TonslQ6NZL6 1363 aa37.53■■■■□ 3.6
Rab40c-201ENSMUST00000026826 Npm1Q61937 292 aaKnown RBP37.52■■■■□ 3.6
Rab40c-201ENSMUST00000026826 Ankrd26Q811D2 1581 aa37.45■■■■□ 3.59
Rab40c-201ENSMUST00000026826 Ppargc1bQ8VHJ7 1014 aa37.43■■■■□ 3.58
Rab40c-201ENSMUST00000026826 Tiam1Q60610 1591 aa37.42■■■■□ 3.58
Rab40c-201ENSMUST00000026826 AqrQ8CFQ3 1481 aaKnown RBP37.42■■■■□ 3.58
Rab40c-201ENSMUST00000026826 Naip1Q9QWK5 1403 aa37.36■■■■□ 3.57
Rab40c-201ENSMUST00000026826 LrpprcQ6PB66 1392 aaKnown RBP37.36■■■■□ 3.57
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms