RNA–Protein interactions for RNA: ENSMUST00000025667.12

Rtn3-201, Transcript of Reticulon-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtn3, Length 2,841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-201ENSMUST00000025667 Gm35339A0A140LHH9 1649 aa27.83■■■□□ 2.05
Rtn3-201ENSMUST00000025667 Rpgrip1Q9EPQ2 1331 aa27.82■■■□□ 2.04
Rtn3-201ENSMUST00000025667 NischQ80TM9 1593 aa27.64■■■□□ 2.02
Rtn3-201ENSMUST00000025667 Abcc9P70170 1546 aa26.77■■□□□ 1.88
Rtn3-201ENSMUST00000025667 Acin1Q9JIX8 1338 aaKnown RBP26.72■■□□□ 1.87
Rtn3-201ENSMUST00000025667 Pcgf6Q99NA9 353 aa26.67■■□□□ 1.86
Rtn3-201ENSMUST00000025667 Abcc8B2RUS7 1588 aa26.63■■□□□ 1.85
Rtn3-201ENSMUST00000025667 Rtl1Q7M732 1744 aa26.15■■□□□ 1.78
Rtn3-201ENSMUST00000025667 Ccdc180J3QNE4 1664 aa26.11■■□□□ 1.77
Rtn3-201ENSMUST00000025667 Neurod1Q60867 357 aa25.85■■□□□ 1.73
Rtn3-201ENSMUST00000025667 Ehmt2Q9Z148 1263 aaKnown RBP25.84■■□□□ 1.73
Rtn3-201ENSMUST00000025667 Las1lA2BE28 776 aaKnown RBP25.74■■□□□ 1.71
Rtn3-201ENSMUST00000025667 Supt5hO55201 1082 aaKnown RBP25.71■■□□□ 1.71
Rtn3-201ENSMUST00000025667 Trim41Q5NCC3 630 aa25.64■■□□□ 1.7
Rtn3-201ENSMUST00000025667 Rhox8Q6VSS7 320 aa25.59■■□□□ 1.69
Rtn3-201ENSMUST00000025667 ScribQ80U72 1612 aa25.5■■□□□ 1.67
Rtn3-201ENSMUST00000025667 Myt1Q8CFC2 1127 aa25.49■■□□□ 1.67
Rtn3-201ENSMUST00000025667 CenpbP27790 599 aa25.43■■□□□ 1.66
Rtn3-201ENSMUST00000025667 1700123L14RikQ3V2K7 440 aa25.42■■□□□ 1.66
Rtn3-201ENSMUST00000025667 Dcaf1Q80TR8 1506 aa25.35■■□□□ 1.65
Rtn3-201ENSMUST00000025667 DiexfQ8BTT6 772 aaKnown RBP25.27■■□□□ 1.64
Rtn3-201ENSMUST00000025667 Csrnp3P59055 597 aa25.04■■□□□ 1.6
Rtn3-201ENSMUST00000025667 Anks4bQ8K3X6 423 aa24.94■■□□□ 1.58
Rtn3-201ENSMUST00000025667 Zcchc6Q5BLK4 1491 aaKnown RBP24.93■■□□□ 1.58
Rtn3-201ENSMUST00000025667 Bcl11aQ9QYE3 773 aa24.85■■□□□ 1.57
Rtn3-201ENSMUST00000025667 HrcG5E8J6 738 aa24.75■■□□□ 1.55
Rtn3-201ENSMUST00000025667 Aplp2Q06335 707 aa24.73■■□□□ 1.55
Rtn3-201ENSMUST00000025667 Kdm5dQ62240 1548 aa24.73■■□□□ 1.55
Rtn3-201ENSMUST00000025667 NacadQ5SWP3 1504 aa24.71■■□□□ 1.55
Rtn3-201ENSMUST00000025667 Zeb1Q64318 1117 aa24.63■■□□□ 1.53
Rtn3-201ENSMUST00000025667 Cngb1E1AZ71 1325 aa24.59■■□□□ 1.53
Rtn3-201ENSMUST00000025667 Sall2Q9QX96 1004 aa24.54■■□□□ 1.52
Rtn3-201ENSMUST00000025667 PrkcshO08795 521 aa24.27■■□□□ 1.48
Rtn3-201ENSMUST00000025667 Gm38655A0A286YDK6 273 aa24.27■■□□□ 1.48
Rtn3-201ENSMUST00000025667 Sycp2Q9CUU3 1500 aa24.22■■□□□ 1.47
Rtn3-201ENSMUST00000025667 NefmP08553 848 aa24.18■■□□□ 1.46
Rtn3-201ENSMUST00000025667 Cdk11bP24788 784 aaKnown RBP24.12■■□□□ 1.45
Rtn3-201ENSMUST00000025667 Rb1cc1Q9ESK9 1588 aa24.12■■□□□ 1.45
Rtn3-201ENSMUST00000025667 Nop58Q6DFW4 536 aaKnown RBP23.99■■□□□ 1.43
Rtn3-201ENSMUST00000025667 Fam71e1A1L3C1 212 aa23.98■■□□□ 1.43
Rtn3-201ENSMUST00000025667 Ifnlr1Q8CGK5 535 aa23.93■■□□□ 1.42
Rtn3-201ENSMUST00000025667 Amer1Q7TS75 1132 aa23.89■■□□□ 1.42
Rtn3-201ENSMUST00000025667 BicraF8VPZ9 1578 aa23.86■■□□□ 1.41
Rtn3-201ENSMUST00000025667 Mier1Q5UAK0 511 aa23.83■■□□□ 1.4
Rtn3-201ENSMUST00000025667 Baz1aO88379 1555 aa23.79■■□□□ 1.4
Rtn3-201ENSMUST00000025667 Wdr66E9Q743 1299 aa23.78■■□□□ 1.4
Rtn3-201ENSMUST00000025667 Aebp2Q9Z248 504 aaKnown RBP23.72■■□□□ 1.39
Rtn3-201ENSMUST00000025667 Mapk8ip2Q9ERE9 830 aa23.62■■□□□ 1.37
Rtn3-201ENSMUST00000025667 Crybg2B7ZCC2 1516 aa23.62■■□□□ 1.37
Rtn3-201ENSMUST00000025667 ClspnQ80YR7 1315 aa23.62■■□□□ 1.37
Rtn3-201ENSMUST00000025667 Ccdc136Q3TVA9 1136 aa23.59■■□□□ 1.37
Rtn3-201ENSMUST00000025667 SafbD3YXK2 937 aaKnown RBP23.52■■□□□ 1.36
Rtn3-201ENSMUST00000025667 Cep164Q5DU05 1446 aa23.51■■□□□ 1.35
Rtn3-201ENSMUST00000025667 Ppargc1bQ8VHJ7 1014 aa23.49■■□□□ 1.35
Rtn3-201ENSMUST00000025667 Hnrnpul2Q00PI9 745 aaKnown RBP23.4■■□□□ 1.34
Rtn3-201ENSMUST00000025667 Tnnt3Q9QZ47 272 aa23.28■■□□□ 1.32
Rtn3-201ENSMUST00000025667 Rtl5Q5DTT4 599 aa23.26■■□□□ 1.31
Rtn3-201ENSMUST00000025667 Hdac5Q9Z2V6 1113 aa23.25■■□□□ 1.31
Rtn3-201ENSMUST00000025667 Anp32aO35381 247 aa23.2■■□□□ 1.3
Rtn3-201ENSMUST00000025667 Smarca2Q6DIC0 1577 aa23.13■■□□□ 1.29
Rtn3-201ENSMUST00000025667 Pds5bQ4VA53 1446 aaKnown RBP23.08■■□□□ 1.29
Rtn3-201ENSMUST00000025667 Fgd1P52734 960 aa23.02■■□□□ 1.28
Rtn3-201ENSMUST00000025667 Pelp1Q9DBD5 1123 aaKnown RBP22.99■■□□□ 1.27
Rtn3-201ENSMUST00000025667 Gab3Q8BSM5 595 aa22.99■■□□□ 1.27
Rtn3-201ENSMUST00000025667 Cecr2E9Q2Z1 1453 aa22.96■■□□□ 1.27
Rtn3-201ENSMUST00000025667 Atad2bE9Q166 1460 aaKnown RBP22.94■■□□□ 1.26
Rtn3-201ENSMUST00000025667 Nolc1E9Q5C9 702 aaKnown RBP22.91■■□□□ 1.26
Rtn3-201ENSMUST00000025667 Ap3b1Q9Z1T1 1105 aa22.9■■□□□ 1.26
Rtn3-201ENSMUST00000025667 Pknox2Q8BG99 474 aa22.9■■□□□ 1.26
Rtn3-201ENSMUST00000025667 TonslQ6NZL6 1363 aa22.9■■□□□ 1.26
Rtn3-201ENSMUST00000025667 Smarca4Q3TKT4 1613 aaKnown RBP22.88■■□□□ 1.25
Rtn3-201ENSMUST00000025667 NrdcQ8BHG1 1161 aa22.85■■□□□ 1.25
Rtn3-201ENSMUST00000025667 UbtfP25976 765 aaKnown RBP22.81■■□□□ 1.24
Rtn3-201ENSMUST00000025667 Ttbk1Q6PCN3 1308 aa22.79■■□□□ 1.24
Rtn3-201ENSMUST00000025667 Gtf3c3Q3TMP1 882 aa22.78■■□□□ 1.24
Rtn3-201ENSMUST00000025667 Thoc2B1AZI6 1594 aaKnown RBP22.78■■□□□ 1.24
Rtn3-201ENSMUST00000025667 Dnajc5bQ9CQ94 199 aa22.77■■□□□ 1.24
Rtn3-201ENSMUST00000025667 Supt16hQ920B9 1047 aa22.76■■□□□ 1.23
Rtn3-201ENSMUST00000025667 Chic1Q8CBW7 227 aa22.75■■□□□ 1.23
Rtn3-201ENSMUST00000025667 Iqgap2Q3UQ44 1575 aa22.73■■□□□ 1.23
Rtn3-201ENSMUST00000025667 Upf2A2AT37 1269 aaKnown RBP22.72■■□□□ 1.23
Rtn3-201ENSMUST00000025667 Plcd4Q8K3R3 807 aa22.72■■□□□ 1.23
Rtn3-201ENSMUST00000025667 Il27Q8K3I6 234 aa22.72■■□□□ 1.23
Rtn3-201ENSMUST00000025667 Rsf1E9PWW9 1441 aaKnown RBP22.69■■□□□ 1.22
Rtn3-201ENSMUST00000025667 Znf710Q3U288 666 aa22.68■■□□□ 1.22
Rtn3-201ENSMUST00000025667 Ercc6F8VPZ5 1481 aa22.61■■□□□ 1.21
Rtn3-201ENSMUST00000025667 Calr4Q3TQS0 420 aa22.6■■□□□ 1.21
Rtn3-201ENSMUST00000025667 Irx3P81067 507 aa22.53■■□□□ 1.2
Rtn3-201ENSMUST00000025667 Ccdc27Q3V036 639 aa22.51■■□□□ 1.19
Rtn3-201ENSMUST00000025667 Brd4Q9ESU6 1400 aaKnown RBP22.49■■□□□ 1.19
Rtn3-201ENSMUST00000025667 Ccdc9Q8VC31 543 aaKnown RBP22.48■■□□□ 1.19
Rtn3-201ENSMUST00000025667 CftrP26361 1476 aa22.48■■□□□ 1.19
Rtn3-201ENSMUST00000025667 Wdr62Q3U3T8 1523 aa22.47■■□□□ 1.19
Rtn3-201ENSMUST00000025667 Synj1Q8CHC4 1574 aa22.47■■□□□ 1.19
Rtn3-201ENSMUST00000025667 Frmpd1A2AKB4 1549 aa22.46■■□□□ 1.19
Rtn3-201ENSMUST00000025667 Cc2d2aQ8CFW7 1633 aa22.45■■□□□ 1.19
Rtn3-201ENSMUST00000025667 Stra8P70278 393 aa22.44■■□□□ 1.18
Rtn3-201ENSMUST00000025667 Cttnbp2B9EJA2 1648 aa22.43■■□□□ 1.18
Rtn3-201ENSMUST00000025667 Ppp4r2Q0VGB7 417 aa22.38■■□□□ 1.17
Rtn3-201ENSMUST00000025667 Ipo4Q8VI75 1082 aa22.35■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms