RNA–Protein interactions for RNA: ENSMUST00000025311.6

Pcdh12-201, Transcript of Protocadherin-12, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh12, Length 3,859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12-201ENSMUST00000025311 Rhox8Q6VSS7 320 aa14.56□□□□□ -0.08
Pcdh12-201ENSMUST00000025311 Rpgrip1Q9EPQ2 1331 aa14.34□□□□□ -0.11
Pcdh12-201ENSMUST00000025311 NischQ80TM9 1593 aa14.22□□□□□ -0.13
Pcdh12-201ENSMUST00000025311 Ehmt2Q9Z148 1263 aaKnown RBP13.89□□□□□ -0.19
Pcdh12-201ENSMUST00000025311 Pcgf6Q99NA9 353 aa13.85□□□□□ -0.19
Pcdh12-201ENSMUST00000025311 Acin1Q9JIX8 1338 aaKnown RBP13.75□□□□□ -0.21
Pcdh12-201ENSMUST00000025311 Las1lA2BE28 776 aaKnown RBP13.56□□□□□ -0.24
Pcdh12-201ENSMUST00000025311 Abcc9P70170 1546 aa13.49□□□□□ -0.25
Pcdh12-201ENSMUST00000025311 Neurod1Q60867 357 aa13.41□□□□□ -0.26
Pcdh12-201ENSMUST00000025311 Supt5hO55201 1082 aaKnown RBP13.41□□□□□ -0.26
Pcdh12-201ENSMUST00000025311 Ccdc136Q3TVA9 1136 aa13.37□□□□□ -0.27
Pcdh12-201ENSMUST00000025311 CenpbP27790 599 aa13.33□□□□□ -0.28
Pcdh12-201ENSMUST00000025311 DiexfQ8BTT6 772 aaKnown RBP13.29□□□□□ -0.28
Pcdh12-201ENSMUST00000025311 Abcc8B2RUS7 1588 aa13.29□□□□□ -0.28
Pcdh12-201ENSMUST00000025311 Zeb1Q64318 1117 aa13.17□□□□□ -0.3
Pcdh12-201ENSMUST00000025311 1700123L14RikQ3V2K7 440 aa13.16□□□□□ -0.3
Pcdh12-201ENSMUST00000025311 Myt1Q8CFC2 1127 aa13.15□□□□□ -0.3
Pcdh12-201ENSMUST00000025311 Gm35339A0A140LHH9 1649 aa13.13□□□□□ -0.31
Pcdh12-201ENSMUST00000025311 Csrnp3P59055 597 aa13.08□□□□□ -0.32
Pcdh12-201ENSMUST00000025311 Ccdc180J3QNE4 1664 aa12.99□□□□□ -0.33
Pcdh12-201ENSMUST00000025311 Cngb1E1AZ71 1325 aa12.97□□□□□ -0.33
Pcdh12-201ENSMUST00000025311 Trim41Q5NCC3 630 aa12.94□□□□□ -0.34
Pcdh12-201ENSMUST00000025311 Gm38655A0A286YDK6 273 aa12.92□□□□□ -0.34
Pcdh12-201ENSMUST00000025311 Bcl11aQ9QYE3 773 aa12.92□□□□□ -0.34
Pcdh12-201ENSMUST00000025311 Anks4bQ8K3X6 423 aa12.84□□□□□ -0.35
Pcdh12-201ENSMUST00000025311 Rtl1Q7M732 1744 aa12.79□□□□□ -0.36
Pcdh12-201ENSMUST00000025311 Wdr66E9Q743 1299 aa12.79□□□□□ -0.36
Pcdh12-201ENSMUST00000025311 Gab3Q8BSM5 595 aa12.78□□□□□ -0.36
Pcdh12-201ENSMUST00000025311 Esf1Q3V1V3 845 aaKnown RBP12.78□□□□□ -0.36
Pcdh12-201ENSMUST00000025311 Sall2Q9QX96 1004 aa12.76□□□□□ -0.37
Pcdh12-201ENSMUST00000025311 Amer1Q7TS75 1132 aa12.75□□□□□ -0.37
Pcdh12-201ENSMUST00000025311 Aplp2Q06335 707 aa12.74□□□□□ -0.37
Pcdh12-201ENSMUST00000025311 Zcchc6Q5BLK4 1491 aaKnown RBP12.69□□□□□ -0.38
Pcdh12-201ENSMUST00000025311 Cdk11bP24788 784 aaKnown RBP12.68□□□□□ -0.38
Pcdh12-201ENSMUST00000025311 Dcaf1Q80TR8 1506 aa12.67□□□□□ -0.38
Pcdh12-201ENSMUST00000025311 PrkcshO08795 521 aa12.67□□□□□ -0.38
Pcdh12-201ENSMUST00000025311 Ppargc1bQ8VHJ7 1014 aa12.64□□□□□ -0.39
Pcdh12-201ENSMUST00000025311 Nop58Q6DFW4 536 aaKnown RBP12.62□□□□□ -0.39
Pcdh12-201ENSMUST00000025311 HrcG5E8J6 738 aa12.57□□□□□ -0.4
Pcdh12-201ENSMUST00000025311 NefmP08553 848 aa12.57□□□□□ -0.4
Pcdh12-201ENSMUST00000025311 Fam71e1A1L3C1 212 aa12.52□□□□□ -0.4
Pcdh12-201ENSMUST00000025311 Mapk8ip2Q9ERE9 830 aa12.48□□□□□ -0.41
Pcdh12-201ENSMUST00000025311 Ifnlr1Q8CGK5 535 aa12.48□□□□□ -0.41
Pcdh12-201ENSMUST00000025311 Rb1cc1Q9ESK9 1588 aa12.46□□□□□ -0.41
Pcdh12-201ENSMUST00000025311 Ttbk1Q6PCN3 1308 aa12.44□□□□□ -0.42
Pcdh12-201ENSMUST00000025311 Myt1lP97500 1187 aa12.41□□□□□ -0.42
Pcdh12-201ENSMUST00000025311 Mier1Q5UAK0 511 aa12.39□□□□□ -0.43
Pcdh12-201ENSMUST00000025311 Npm2Q80W85 207 aa12.32□□□□□ -0.44
Pcdh12-201ENSMUST00000025311 SafbD3YXK2 937 aaKnown RBP12.32□□□□□ -0.44
Pcdh12-201ENSMUST00000025311 Aebp2Q9Z248 504 aaKnown RBP12.31□□□□□ -0.44
Pcdh12-201ENSMUST00000025311 Kdm5dQ62240 1548 aa12.3□□□□□ -0.44
Pcdh12-201ENSMUST00000025311 Pelp1Q9DBD5 1123 aaKnown RBP12.29□□□□□ -0.44
Pcdh12-201ENSMUST00000025311 Il27Q8K3I6 234 aa12.28□□□□□ -0.44
Pcdh12-201ENSMUST00000025311 ScribQ80U72 1612 aa12.27□□□□□ -0.45
Pcdh12-201ENSMUST00000025311 NacadQ5SWP3 1504 aa12.26□□□□□ -0.45
Pcdh12-201ENSMUST00000025311 ClspnQ80YR7 1315 aa12.24□□□□□ -0.45
Pcdh12-201ENSMUST00000025311 Chic1Q8CBW7 227 aa12.22□□□□□ -0.45
Pcdh12-201ENSMUST00000025311 Baz1aO88379 1555 aa12.18□□□□□ -0.46
Pcdh12-201ENSMUST00000025311 Hnrnpul2Q00PI9 745 aaKnown RBP12.17□□□□□ -0.46
Pcdh12-201ENSMUST00000025311 UbtfP25976 765 aaKnown RBP12.17□□□□□ -0.46
Pcdh12-201ENSMUST00000025311 Tnnt3Q9QZ47 272 aa12.16□□□□□ -0.46
Pcdh12-201ENSMUST00000025311 Anp32aO35381 247 aa12.14□□□□□ -0.47
Pcdh12-201ENSMUST00000025311 Ap3b1Q9Z1T1 1105 aa12.12□□□□□ -0.47
Pcdh12-201ENSMUST00000025311 Rtl5Q5DTT4 599 aa12.09□□□□□ -0.47
Pcdh12-201ENSMUST00000025311 Hdac5Q9Z2V6 1113 aa12.07□□□□□ -0.48
Pcdh12-201ENSMUST00000025311 Brd4Q9ESU6 1400 aaKnown RBP12.01□□□□□ -0.49
Pcdh12-201ENSMUST00000025311 TonslQ6NZL6 1363 aa11.97□□□□□ -0.49
Pcdh12-201ENSMUST00000025311 Pknox2Q8BG99 474 aa11.96□□□□□ -0.49
Pcdh12-201ENSMUST00000025311 Slc24a1Q91WD8 1130 aa11.92□□□□□ -0.5
Pcdh12-201ENSMUST00000025311 Sycp2Q9CUU3 1500 aa11.9□□□□□ -0.5
Pcdh12-201ENSMUST00000025311 Cep164Q5DU05 1446 aa11.9□□□□□ -0.5
Pcdh12-201ENSMUST00000025311 Ube2uB1AUC4 352 aa11.89□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 Cecr2E9Q2Z1 1453 aa11.89□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 4933416C03RikQ3V063 378 aa11.88□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 Nolc1E9Q5C9 702 aaKnown RBP11.88□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 Plcd4Q8K3R3 807 aa11.87□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 Rsf1E9PWW9 1441 aaKnown RBP11.86□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 Plekhg3Q4VAC9 1341 aa11.86□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 Gtf3c3Q3TMP1 882 aa11.85□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 Calr4Q3TQS0 420 aa11.85□□□□□ -0.51
Pcdh12-201ENSMUST00000025311 Stra8P70278 393 aa11.83□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Ppp4r2Q0VGB7 417 aa11.82□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Supt16hQ920B9 1047 aa11.82□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Fgd1P52734 960 aa11.8□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Upf2A2AT37 1269 aaKnown RBP11.79□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Eif5bQ05D44 1216 aaKnown RBP11.79□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Ccdc88bQ4QRL3 1481 aa11.79□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Irx3P81067 507 aa11.79□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 NrdcQ8BHG1 1161 aa11.78□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Golga3P55937 1487 aa11.78□□□□□ -0.52
Pcdh12-201ENSMUST00000025311 Smarca2Q6DIC0 1577 aa11.75□□□□□ -0.53
Pcdh12-201ENSMUST00000025311 Npm1Q61937 292 aaKnown RBP11.75□□□□□ -0.53
Pcdh12-201ENSMUST00000025311 Lmod2Q3UHZ5 550 aa11.74□□□□□ -0.53
Pcdh12-201ENSMUST00000025311 Ccdc27Q3V036 639 aa11.73□□□□□ -0.53
Pcdh12-201ENSMUST00000025311 DaxxO35613 739 aa11.73□□□□□ -0.53
Pcdh12-201ENSMUST00000025311 Fam50aQ9WV03 339 aaKnown RBP11.72□□□□□ -0.53
Pcdh12-201ENSMUST00000025311 Wdr43Q6ZQL4 677 aaKnown RBP11.7□□□□□ -0.54
Pcdh12-201ENSMUST00000025311 Ubl4bQ9CQ84 188 aa11.7□□□□□ -0.54
Pcdh12-201ENSMUST00000025311 Eid3Q3V124 375 aa11.69□□□□□ -0.54
Pcdh12-201ENSMUST00000025311 Hsp90aa1P07901 733 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms