RNA–Protein interactions for RNA: ENSMUST00000025204.5

Pfdn1-201, Transcript of Prefoldin subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pfdn1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1-201ENSMUST00000025204 Gm35339A0A140LHH9 1649 aa29.45■■■□□ 2.3
Pfdn1-201ENSMUST00000025204 NischQ80TM9 1593 aa29.01■■■□□ 2.24
Pfdn1-201ENSMUST00000025204 Abcc9P70170 1546 aa28.13■■■□□ 2.09
Pfdn1-201ENSMUST00000025204 Abcc8B2RUS7 1588 aa28.05■■■□□ 2.08
Pfdn1-201ENSMUST00000025204 ScribQ80U72 1612 aa26.96■■□□□ 1.91
Pfdn1-201ENSMUST00000025204 NacadQ5SWP3 1504 aa26.18■■□□□ 1.78
Pfdn1-201ENSMUST00000025204 Kdm5dQ62240 1548 aa26.09■■□□□ 1.77
Pfdn1-201ENSMUST00000025204 Dcaf1Q80TR8 1506 aa25.95■■□□□ 1.74
Pfdn1-201ENSMUST00000025204 Sycp2Q9CUU3 1500 aa25.65■■□□□ 1.7
Pfdn1-201ENSMUST00000025204 Rb1cc1Q9ESK9 1588 aa25.28■■□□□ 1.64
Pfdn1-201ENSMUST00000025204 BicraF8VPZ9 1578 aa25.24■■□□□ 1.63
Pfdn1-201ENSMUST00000025204 Ccdc180J3QNE4 1664 aa25.08■■□□□ 1.61
Pfdn1-201ENSMUST00000025204 Rhox8Q6VSS7 320 aa25■■□□□ 1.59
Pfdn1-201ENSMUST00000025204 Crybg2B7ZCC2 1516 aa24.98■■□□□ 1.59
Pfdn1-201ENSMUST00000025204 Baz1aO88379 1555 aa24.97■■□□□ 1.59
Pfdn1-201ENSMUST00000025204 Pds5bQ4VA53 1446 aaKnown RBP24.57■■□□□ 1.52
Pfdn1-201ENSMUST00000025204 Zcchc6Q5BLK4 1491 aaKnown RBP24.5■■□□□ 1.51
Pfdn1-201ENSMUST00000025204 Atad2bE9Q166 1460 aaKnown RBP24.36■■□□□ 1.49
Pfdn1-201ENSMUST00000025204 Thoc2B1AZI6 1594 aaKnown RBP24.31■■□□□ 1.48
Pfdn1-201ENSMUST00000025204 Dnajc5bQ9CQ94 199 aa24.28■■□□□ 1.48
Pfdn1-201ENSMUST00000025204 Smarca2Q6DIC0 1577 aa24.26■■□□□ 1.47
Pfdn1-201ENSMUST00000025204 Smarca4Q3TKT4 1613 aaKnown RBP24.17■■□□□ 1.46
Pfdn1-201ENSMUST00000025204 Cecr2E9Q2Z1 1453 aa24.07■■□□□ 1.44
Pfdn1-201ENSMUST00000025204 Iqgap2Q3UQ44 1575 aa24.01■■□□□ 1.43
Pfdn1-201ENSMUST00000025204 Ercc6F8VPZ5 1481 aa24■■□□□ 1.43
Pfdn1-201ENSMUST00000025204 Rtl1Q7M732 1744 aa23.91■■□□□ 1.42
Pfdn1-201ENSMUST00000025204 Cc2d2aQ8CFW7 1633 aa23.86■■□□□ 1.41
Pfdn1-201ENSMUST00000025204 Wdr62Q3U3T8 1523 aa23.81■■□□□ 1.4
Pfdn1-201ENSMUST00000025204 Fam135aQ6NS59 1506 aa23.8■■□□□ 1.4
Pfdn1-201ENSMUST00000025204 Frmpd1A2AKB4 1549 aa23.75■■□□□ 1.39
Pfdn1-201ENSMUST00000025204 Baz1bQ9Z277 1479 aa23.69■■□□□ 1.38
Pfdn1-201ENSMUST00000025204 Phldb1Q6PDH0 1371 aaKnown RBP23.64■■□□□ 1.37
Pfdn1-201ENSMUST00000025204 CftrP26361 1476 aa23.61■■□□□ 1.37
Pfdn1-201ENSMUST00000025204 Brd4Q9ESU6 1400 aaKnown RBP23.59■■□□□ 1.37
Pfdn1-201ENSMUST00000025204 Cttnbp2B9EJA2 1648 aa23.58■■□□□ 1.36
Pfdn1-201ENSMUST00000025204 Synj1Q8CHC4 1574 aa23.51■■□□□ 1.35
Pfdn1-201ENSMUST00000025204 Unc13aQ4KUS2 1712 aa23.39■■□□□ 1.34
Pfdn1-201ENSMUST00000025204 Ccdc136Q3TVA9 1136 aa23.38■■□□□ 1.33
Pfdn1-201ENSMUST00000025204 Ubl4bQ9CQ84 188 aa23.32■■□□□ 1.32
Pfdn1-201ENSMUST00000025204 Mrc2Q64449 1479 aa23.21■■□□□ 1.31
Pfdn1-201ENSMUST00000025204 Trim41Q5NCC3 630 aa23.17■■□□□ 1.3
Pfdn1-201ENSMUST00000025204 Esf1Q3V1V3 845 aaKnown RBP23.06■■□□□ 1.28
Pfdn1-201ENSMUST00000025204 Rsf1E9PWW9 1441 aaKnown RBP23■■□□□ 1.27
Pfdn1-201ENSMUST00000025204 Lamc3Q9R0B6 1581 aa22.91■■□□□ 1.26
Pfdn1-201ENSMUST00000025204 Kif15Q6P9L6 1387 aa22.9■■□□□ 1.26
Pfdn1-201ENSMUST00000025204 Cux2P70298 1426 aa22.88■■□□□ 1.25
Pfdn1-201ENSMUST00000025204 Golga3P55937 1487 aa22.76■■□□□ 1.23
Pfdn1-201ENSMUST00000025204 Top2bQ64511 1612 aa22.74■■□□□ 1.23
Pfdn1-201ENSMUST00000025204 TnnQ80Z71 1560 aa22.68■■□□□ 1.22
Pfdn1-201ENSMUST00000025204 Lrriq1Q0P5X1 1673 aa22.65■■□□□ 1.22
Pfdn1-201ENSMUST00000025204 Kif21aQ9QXL2 1672 aa22.65■■□□□ 1.22
Pfdn1-201ENSMUST00000025204 Npm1Q61937 292 aaKnown RBP22.62■■□□□ 1.21
Pfdn1-201ENSMUST00000025204 Cep164Q5DU05 1446 aa22.6■■□□□ 1.21
Pfdn1-201ENSMUST00000025204 Ccdc18Q640L5 1455 aa22.56■■□□□ 1.2
Pfdn1-201ENSMUST00000025204 Fmn1Q05860 1466 aa22.51■■□□□ 1.19
Pfdn1-201ENSMUST00000025204 Cngb1E1AZ71 1325 aa22.51■■□□□ 1.19
Pfdn1-201ENSMUST00000025204 Camsap1A2AHC3 1581 aa22.47■■□□□ 1.19
Pfdn1-201ENSMUST00000025204 LrpprcQ6PB66 1392 aaKnown RBP22.42■■□□□ 1.18
Pfdn1-201ENSMUST00000025204 Dhx29Q6PGC1 1365 aaKnown RBP22.42■■□□□ 1.18
Pfdn1-201ENSMUST00000025204 Eif4g3Q80XI3 1579 aaKnown RBP22.38■■□□□ 1.17
Pfdn1-201ENSMUST00000025204 Urb2E9Q7L1 1524 aaKnown RBP22.33■■□□□ 1.17
Pfdn1-201ENSMUST00000025204 Il27Q8K3I6 234 aa22.32■■□□□ 1.16
Pfdn1-201ENSMUST00000025204 Crocc2F6XLV1 1638 aa22.31■■□□□ 1.16
Pfdn1-201ENSMUST00000025204 PogzQ8BZH4 1409 aaKnown RBP22.31■■□□□ 1.16
Pfdn1-201ENSMUST00000025204 Plb1Q3TTY0 1478 aa22.3■■□□□ 1.16
Pfdn1-201ENSMUST00000025204 Grin2bQ01097 1482 aa22.19■■□□□ 1.14
Pfdn1-201ENSMUST00000025204 Duox2A2AQ99 1517 aa22.18■■□□□ 1.14
Pfdn1-201ENSMUST00000025204 Ift140E9PY46 1464 aa22.18■■□□□ 1.14
Pfdn1-201ENSMUST00000025204 Shroom2A2ALU4 1481 aa22.1■■□□□ 1.13
Pfdn1-201ENSMUST00000025204 Ccdc88bQ4QRL3 1481 aa22.1■■□□□ 1.13
Pfdn1-201ENSMUST00000025204 Efcab5A0JP43 1406 aa22.09■■□□□ 1.13
Pfdn1-201ENSMUST00000025204 Top2aQ01320 1528 aaKnown RBP22.08■■□□□ 1.13
Pfdn1-201ENSMUST00000025204 Rusc2Q80U22 1514 aa22.06■■□□□ 1.12
Pfdn1-201ENSMUST00000025204 NrkQ9R0G8 1455 aa22.02■■□□□ 1.12
Pfdn1-201ENSMUST00000025204 Disp1Q3TDN0 1521 aa22.01■■□□□ 1.11
Pfdn1-201ENSMUST00000025204 Samd9lQ69Z37 1561 aa21.98■■□□□ 1.11
Pfdn1-201ENSMUST00000025204 Dnajc5P60904 198 aa21.97■■□□□ 1.11
Pfdn1-201ENSMUST00000025204 Pbrm1Q8BSQ9 1634 aaKnown RBP21.97■■□□□ 1.11
Pfdn1-201ENSMUST00000025204 Nup160Q9Z0W3 1402 aaKnown RBP21.95■■□□□ 1.1
Pfdn1-201ENSMUST00000025204 Cc2d2bA0A286YDU8 1405 aa21.92■■□□□ 1.1
Pfdn1-201ENSMUST00000025204 Chic1Q8CBW7 227 aa21.9■■□□□ 1.1
Pfdn1-201ENSMUST00000025204 Shroom4Q1W617 1475 aa21.87■■□□□ 1.09
Pfdn1-201ENSMUST00000025204 Setd1bQ8CFT2 1985 aa21.85■■□□□ 1.09
Pfdn1-201ENSMUST00000025204 Pabpn1Q8CCS6 302 aaKnown RBP21.81■■□□□ 1.08
Pfdn1-201ENSMUST00000025204 Gpatch8A2A6A1 1505 aa21.8■■□□□ 1.08
Pfdn1-201ENSMUST00000025204 Magi3Q9EQJ9 1476 aa21.8■■□□□ 1.08
Pfdn1-201ENSMUST00000025204 Grin2aP35436 1464 aa21.79■■□□□ 1.08
Pfdn1-201ENSMUST00000025204 PtprkP35822 1457 aa21.79■■□□□ 1.08
Pfdn1-201ENSMUST00000025204 Rad54l2Q99NG0 1466 aa21.78■■□□□ 1.08
Pfdn1-201ENSMUST00000025204 AqrQ8CFQ3 1481 aaKnown RBP21.74■■□□□ 1.07
Pfdn1-201ENSMUST00000025204 SynmQ70IV5 1561 aa21.73■■□□□ 1.07
Pfdn1-201ENSMUST00000025204 Mapk8ip2Q9ERE9 830 aa21.72■■□□□ 1.07
Pfdn1-201ENSMUST00000025204 Col17a1Q07563 1470 aa21.71■■□□□ 1.07
Pfdn1-201ENSMUST00000025204 HrcG5E8J6 738 aa21.69■■□□□ 1.06
Pfdn1-201ENSMUST00000025204 Pla2r1Q62028 1487 aa21.67■■□□□ 1.06
Pfdn1-201ENSMUST00000025204 Fgd6Q69ZL1 1399 aa21.63■■□□□ 1.05
Pfdn1-201ENSMUST00000025204 Zcchc11B2RX14 1644 aaKnown RBP21.61■■□□□ 1.05
Pfdn1-201ENSMUST00000025204 Mroh2bQ7M6Y6 1581 aa21.59■■□□□ 1.05
Pfdn1-201ENSMUST00000025204 Pelp1Q9DBD5 1123 aaKnown RBP21.57■■□□□ 1.04
Pfdn1-201ENSMUST00000025204 Zeb1Q64318 1117 aa21.51■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 84 ms