RNA–Protein interactions for RNA: ENSMUST00000021539.15

Vrk1-201, Transcript of Serine/threonine-protein kinase VRK1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vrk1, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1-201ENSMUST00000021539 NischQ80TM9 1593 aa23.72■■□□□ 1.39
Vrk1-201ENSMUST00000021539 Gm35339A0A140LHH9 1649 aa23.67■■□□□ 1.38
Vrk1-201ENSMUST00000021539 Abcc9P70170 1546 aa23.06■■□□□ 1.28
Vrk1-201ENSMUST00000021539 Abcc8B2RUS7 1588 aa22.65■■□□□ 1.22
Vrk1-201ENSMUST00000021539 Rhox8Q6VSS7 320 aa21.36■■□□□ 1.01
Vrk1-201ENSMUST00000021539 ScribQ80U72 1612 aa21.28■■□□□ 1
Vrk1-201ENSMUST00000021539 Dcaf1Q80TR8 1506 aa21.21■□□□□ 0.99
Vrk1-201ENSMUST00000021539 Rtl1Q7M732 1744 aa21.09■□□□□ 0.97
Vrk1-201ENSMUST00000021539 Kdm5dQ62240 1548 aa20.81■□□□□ 0.92
Vrk1-201ENSMUST00000021539 NacadQ5SWP3 1504 aa20.79■□□□□ 0.92
Vrk1-201ENSMUST00000021539 Rb1cc1Q9ESK9 1588 aa20.77■□□□□ 0.92
Vrk1-201ENSMUST00000021539 Ccdc180J3QNE4 1664 aa20.76■□□□□ 0.91
Vrk1-201ENSMUST00000021539 Baz1aO88379 1555 aa20.55■□□□□ 0.88
Vrk1-201ENSMUST00000021539 Crybg2B7ZCC2 1516 aa20.36■□□□□ 0.85
Vrk1-201ENSMUST00000021539 Sycp2Q9CUU3 1500 aa20.31■□□□□ 0.84
Vrk1-201ENSMUST00000021539 Zcchc6Q5BLK4 1491 aaKnown RBP20.21■□□□□ 0.83
Vrk1-201ENSMUST00000021539 Smarca2Q6DIC0 1577 aa20.04■□□□□ 0.8
Vrk1-201ENSMUST00000021539 BicraF8VPZ9 1578 aa19.84■□□□□ 0.77
Vrk1-201ENSMUST00000021539 Ccdc136Q3TVA9 1136 aa19.79■□□□□ 0.76
Vrk1-201ENSMUST00000021539 Trim41Q5NCC3 630 aa19.65■□□□□ 0.74
Vrk1-201ENSMUST00000021539 Brd4Q9ESU6 1400 aaKnown RBP19.56■□□□□ 0.72
Vrk1-201ENSMUST00000021539 HrcG5E8J6 738 aa19.51■□□□□ 0.71
Vrk1-201ENSMUST00000021539 Cecr2E9Q2Z1 1453 aa19.51■□□□□ 0.71
Vrk1-201ENSMUST00000021539 Smarca4Q3TKT4 1613 aaKnown RBP19.38■□□□□ 0.69
Vrk1-201ENSMUST00000021539 Chic1Q8CBW7 227 aa19.37■□□□□ 0.69
Vrk1-201ENSMUST00000021539 Synj1Q8CHC4 1574 aa19.33■□□□□ 0.69
Vrk1-201ENSMUST00000021539 Cttnbp2B9EJA2 1648 aa19.31■□□□□ 0.68
Vrk1-201ENSMUST00000021539 CftrP26361 1476 aa19.3■□□□□ 0.68
Vrk1-201ENSMUST00000021539 Golga3P55937 1487 aa19.17■□□□□ 0.66
Vrk1-201ENSMUST00000021539 Pds5bQ4VA53 1446 aaKnown RBP19.17■□□□□ 0.66
Vrk1-201ENSMUST00000021539 Atad2bE9Q166 1460 aaKnown RBP19.16■□□□□ 0.66
Vrk1-201ENSMUST00000021539 Iqgap2Q3UQ44 1575 aa19.13■□□□□ 0.65
Vrk1-201ENSMUST00000021539 Cep164Q5DU05 1446 aa19.08■□□□□ 0.64
Vrk1-201ENSMUST00000021539 Top2bQ64511 1612 aa19.04■□□□□ 0.64
Vrk1-201ENSMUST00000021539 Cngb1E1AZ71 1325 aa19.03■□□□□ 0.64
Vrk1-201ENSMUST00000021539 Esf1Q3V1V3 845 aaKnown RBP19.03■□□□□ 0.64
Vrk1-201ENSMUST00000021539 Rsf1E9PWW9 1441 aaKnown RBP18.89■□□□□ 0.62
Vrk1-201ENSMUST00000021539 Wdr62Q3U3T8 1523 aa18.82■□□□□ 0.6
Vrk1-201ENSMUST00000021539 Ccdc88bQ4QRL3 1481 aa18.82■□□□□ 0.6
Vrk1-201ENSMUST00000021539 Ercc6F8VPZ5 1481 aa18.81■□□□□ 0.6
Vrk1-201ENSMUST00000021539 Cc2d2aQ8CFW7 1633 aa18.78■□□□□ 0.6
Vrk1-201ENSMUST00000021539 Fmn1Q05860 1466 aa18.78■□□□□ 0.6
Vrk1-201ENSMUST00000021539 Frmpd1A2AKB4 1549 aa18.76■□□□□ 0.59
Vrk1-201ENSMUST00000021539 Dnajc5bQ9CQ94 199 aa18.72■□□□□ 0.59
Vrk1-201ENSMUST00000021539 Thoc2B1AZI6 1594 aaKnown RBP18.63■□□□□ 0.57
Vrk1-201ENSMUST00000021539 TnnQ80Z71 1560 aa18.62■□□□□ 0.57
Vrk1-201ENSMUST00000021539 Top2aQ01320 1528 aaKnown RBP18.6■□□□□ 0.57
Vrk1-201ENSMUST00000021539 Unc13aQ4KUS2 1712 aa18.57■□□□□ 0.56
Vrk1-201ENSMUST00000021539 Lamc3Q9R0B6 1581 aa18.55■□□□□ 0.56
Vrk1-201ENSMUST00000021539 Gab3Q8BSM5 595 aa18.49■□□□□ 0.55
Vrk1-201ENSMUST00000021539 Phldb1Q6PDH0 1371 aaKnown RBP18.48■□□□□ 0.55
Vrk1-201ENSMUST00000021539 Rpgrip1Q9EPQ2 1331 aa18.44■□□□□ 0.54
Vrk1-201ENSMUST00000021539 Fam135aQ6NS59 1506 aa18.42■□□□□ 0.54
Vrk1-201ENSMUST00000021539 Kif15Q6P9L6 1387 aa18.41■□□□□ 0.54
Vrk1-201ENSMUST00000021539 Rapgef2Q8CHG7 1496 aa18.41■□□□□ 0.54
Vrk1-201ENSMUST00000021539 Mapk8ip2Q9ERE9 830 aa18.37■□□□□ 0.53
Vrk1-201ENSMUST00000021539 Baz1bQ9Z277 1479 aa18.32■□□□□ 0.52
Vrk1-201ENSMUST00000021539 Camsap1A2AHC3 1581 aa18.32■□□□□ 0.52
Vrk1-201ENSMUST00000021539 Ccdc18Q640L5 1455 aa18.3■□□□□ 0.52
Vrk1-201ENSMUST00000021539 Acin1Q9JIX8 1338 aaKnown RBP18.25■□□□□ 0.51
Vrk1-201ENSMUST00000021539 Cep162Q6ZQ06 1403 aa18.24■□□□□ 0.51
Vrk1-201ENSMUST00000021539 Ubl4bQ9CQ84 188 aa18.23■□□□□ 0.51
Vrk1-201ENSMUST00000021539 Ehmt2Q9Z148 1263 aaKnown RBP18.22■□□□□ 0.51
Vrk1-201ENSMUST00000021539 NrkQ9R0G8 1455 aa18.21■□□□□ 0.51
Vrk1-201ENSMUST00000021539 Eif4g1Q6NZJ6 1600 aaKnown RBP18.19■□□□□ 0.5
Vrk1-201ENSMUST00000021539 Cux2P70298 1426 aa18.19■□□□□ 0.5
Vrk1-201ENSMUST00000021539 Npm2Q80W85 207 aa18.17■□□□□ 0.5
Vrk1-201ENSMUST00000021539 Shroom4Q1W617 1475 aa18.15■□□□□ 0.5
Vrk1-201ENSMUST00000021539 Grin2bQ01097 1482 aa18.14■□□□□ 0.49
Vrk1-201ENSMUST00000021539 Il27Q8K3I6 234 aa18.12■□□□□ 0.49
Vrk1-201ENSMUST00000021539 Npm1Q61937 292 aaKnown RBP18.08■□□□□ 0.48
Vrk1-201ENSMUST00000021539 PtprkP35822 1457 aa18.06■□□□□ 0.48
Vrk1-201ENSMUST00000021539 Map3k1P53349 1493 aa18.06■□□□□ 0.48
Vrk1-201ENSMUST00000021539 Arhgap35Q91YM2 1499 aa18.04■□□□□ 0.48
Vrk1-201ENSMUST00000021539 LrpprcQ6PB66 1392 aaKnown RBP18.02■□□□□ 0.48
Vrk1-201ENSMUST00000021539 Efcab5A0JP43 1406 aa18■□□□□ 0.47
Vrk1-201ENSMUST00000021539 Mrc2Q64449 1479 aa17.99■□□□□ 0.47
Vrk1-201ENSMUST00000021539 Myt1lP97500 1187 aa17.98■□□□□ 0.47
Vrk1-201ENSMUST00000021539 PogzQ8BZH4 1409 aaKnown RBP17.98■□□□□ 0.47
Vrk1-201ENSMUST00000021539 Mroh2bQ7M6Y6 1581 aa17.94■□□□□ 0.46
Vrk1-201ENSMUST00000021539 AqrQ8CFQ3 1481 aaKnown RBP17.92■□□□□ 0.46
Vrk1-201ENSMUST00000021539 Duox2A2AQ99 1517 aa17.91■□□□□ 0.46
Vrk1-201ENSMUST00000021539 Clip1Q922J3 1391 aa17.88■□□□□ 0.45
Vrk1-201ENSMUST00000021539 Dhx29Q6PGC1 1365 aaKnown RBP17.87■□□□□ 0.45
Vrk1-201ENSMUST00000021539 Kif21aQ9QXL2 1672 aa17.85■□□□□ 0.45
Vrk1-201ENSMUST00000021539 Zeb1Q64318 1117 aa17.85■□□□□ 0.45
Vrk1-201ENSMUST00000021539 Eea1Q8BL66 1411 aa17.85■□□□□ 0.45
Vrk1-201ENSMUST00000021539 Crocc2F6XLV1 1638 aa17.84■□□□□ 0.45
Vrk1-201ENSMUST00000021539 SynmQ70IV5 1561 aa17.79■□□□□ 0.44
Vrk1-201ENSMUST00000021539 Carmil1Q6EDY6 1374 aa17.79■□□□□ 0.44
Vrk1-201ENSMUST00000021539 Samd9lQ69Z37 1561 aa17.78■□□□□ 0.44
Vrk1-201ENSMUST00000021539 Erich3F6QRE9 1637 aa17.77■□□□□ 0.44
Vrk1-201ENSMUST00000021539 Setd5Q5XJV7 1441 aa17.74■□□□□ 0.43
Vrk1-201ENSMUST00000021539 Polr1aO35134 1717 aaKnown RBP17.73■□□□□ 0.43
Vrk1-201ENSMUST00000021539 Arhgef5E9Q7D5 1581 aa17.71■□□□□ 0.43
Vrk1-201ENSMUST00000021539 Ankrd26Q811D2 1581 aa17.71■□□□□ 0.43
Vrk1-201ENSMUST00000021539 Arap1Q4LDD4 1452 aa17.71■□□□□ 0.43
Vrk1-201ENSMUST00000021539 Phf23Q8BSN5 401 aa17.67■□□□□ 0.42
Vrk1-201ENSMUST00000021539 Rpap1Q80TE0 1409 aa17.66■□□□□ 0.42
Vrk1-201ENSMUST00000021539 UbtfP25976 765 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 74.7 ms