RNA–Protein interactions for RNA: ENSMUST00000021338.9

Ap4s1-201, Transcript of AP-4 complex subunit sigma-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ap4s1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1-201ENSMUST00000021338 Gm35339A0A140LHH9 1649 aa42.27■■■■■ 4.36
Ap4s1-201ENSMUST00000021338 NischQ80TM9 1593 aa41.76■■■■■ 4.28
Ap4s1-201ENSMUST00000021338 Abcc9P70170 1546 aa40.53■■■■■ 4.08
Ap4s1-201ENSMUST00000021338 Abcc8B2RUS7 1588 aa40.27■■■■■ 4.04
Ap4s1-201ENSMUST00000021338 ScribQ80U72 1612 aa38.51■■■■□ 3.76
Ap4s1-201ENSMUST00000021338 NacadQ5SWP3 1504 aa37.46■■■■□ 3.59
Ap4s1-201ENSMUST00000021338 Dcaf1Q80TR8 1506 aa37.41■■■■□ 3.58
Ap4s1-201ENSMUST00000021338 Kdm5dQ62240 1548 aa37.36■■■■□ 3.57
Ap4s1-201ENSMUST00000021338 Sycp2Q9CUU3 1500 aa36.68■■■■□ 3.46
Ap4s1-201ENSMUST00000021338 Rb1cc1Q9ESK9 1588 aa36.44■■■■□ 3.42
Ap4s1-201ENSMUST00000021338 Rhox8Q6VSS7 320 aa36.28■■■■□ 3.4
Ap4s1-201ENSMUST00000021338 Ccdc180J3QNE4 1664 aa36.26■■■■□ 3.4
Ap4s1-201ENSMUST00000021338 BicraF8VPZ9 1578 aa36.02■■■■□ 3.36
Ap4s1-201ENSMUST00000021338 Baz1aO88379 1555 aa36.02■■■■□ 3.36
Ap4s1-201ENSMUST00000021338 Crybg2B7ZCC2 1516 aa35.97■■■■□ 3.35
Ap4s1-201ENSMUST00000021338 Zcchc6Q5BLK4 1491 aaKnown RBP35.25■■■■□ 3.23
Ap4s1-201ENSMUST00000021338 Pds5bQ4VA53 1446 aaKnown RBP35.04■■■■□ 3.2
Ap4s1-201ENSMUST00000021338 Smarca2Q6DIC0 1577 aa35.01■■■■□ 3.2
Ap4s1-201ENSMUST00000021338 Rtl1Q7M732 1744 aa34.86■■■■□ 3.17
Ap4s1-201ENSMUST00000021338 Atad2bE9Q166 1460 aaKnown RBP34.78■■■■□ 3.16
Ap4s1-201ENSMUST00000021338 Smarca4Q3TKT4 1613 aaKnown RBP34.66■■■■□ 3.14
Ap4s1-201ENSMUST00000021338 Thoc2B1AZI6 1594 aaKnown RBP34.53■■■■□ 3.12
Ap4s1-201ENSMUST00000021338 Cecr2E9Q2Z1 1453 aa34.52■■■■□ 3.12
Ap4s1-201ENSMUST00000021338 Iqgap2Q3UQ44 1575 aa34.37■■■■□ 3.09
Ap4s1-201ENSMUST00000021338 Ercc6F8VPZ5 1481 aa34.27■■■■□ 3.08
Ap4s1-201ENSMUST00000021338 Brd4Q9ESU6 1400 aaKnown RBP34.08■■■■□ 3.05
Ap4s1-201ENSMUST00000021338 Dnajc5bQ9CQ94 199 aa34.07■■■■□ 3.04
Ap4s1-201ENSMUST00000021338 Wdr62Q3U3T8 1523 aa34.04■■■■□ 3.04
Ap4s1-201ENSMUST00000021338 Cttnbp2B9EJA2 1648 aa33.97■■■■□ 3.03
Ap4s1-201ENSMUST00000021338 CftrP26361 1476 aa33.97■■■■□ 3.03
Ap4s1-201ENSMUST00000021338 Frmpd1A2AKB4 1549 aa33.93■■■■□ 3.02
Ap4s1-201ENSMUST00000021338 Cc2d2aQ8CFW7 1633 aa33.9■■■■□ 3.02
Ap4s1-201ENSMUST00000021338 Fam135aQ6NS59 1506 aa33.89■■■■□ 3.02
Ap4s1-201ENSMUST00000021338 Synj1Q8CHC4 1574 aa33.86■■■■□ 3.01
Ap4s1-201ENSMUST00000021338 Ccdc136Q3TVA9 1136 aa33.82■■■■□ 3
Ap4s1-201ENSMUST00000021338 Baz1bQ9Z277 1479 aa33.81■■■■□ 3
Ap4s1-201ENSMUST00000021338 Phldb1Q6PDH0 1371 aaKnown RBP33.71■■■□□ 2.99
Ap4s1-201ENSMUST00000021338 Trim41Q5NCC3 630 aa33.6■■■□□ 2.97
Ap4s1-201ENSMUST00000021338 Unc13aQ4KUS2 1712 aa33.43■■■□□ 2.94
Ap4s1-201ENSMUST00000021338 Esf1Q3V1V3 845 aaKnown RBP33.22■■■□□ 2.91
Ap4s1-201ENSMUST00000021338 Ubl4bQ9CQ84 188 aa33.2■■■□□ 2.91
Ap4s1-201ENSMUST00000021338 Mrc2Q64449 1479 aa33.05■■■□□ 2.88
Ap4s1-201ENSMUST00000021338 Rsf1E9PWW9 1441 aaKnown RBP33.02■■■□□ 2.88
Ap4s1-201ENSMUST00000021338 Golga3P55937 1487 aa32.98■■■□□ 2.87
Ap4s1-201ENSMUST00000021338 Lamc3Q9R0B6 1581 aa32.92■■■□□ 2.86
Ap4s1-201ENSMUST00000021338 Top2bQ64511 1612 aa32.91■■■□□ 2.86
Ap4s1-201ENSMUST00000021338 Kif15Q6P9L6 1387 aa32.83■■■□□ 2.85
Ap4s1-201ENSMUST00000021338 Cux2P70298 1426 aa32.72■■■□□ 2.83
Ap4s1-201ENSMUST00000021338 TnnQ80Z71 1560 aa32.7■■■□□ 2.83
Ap4s1-201ENSMUST00000021338 Cngb1E1AZ71 1325 aa32.58■■■□□ 2.81
Ap4s1-201ENSMUST00000021338 Fmn1Q05860 1466 aa32.57■■■□□ 2.8
Ap4s1-201ENSMUST00000021338 Ccdc18Q640L5 1455 aa32.43■■■□□ 2.78
Ap4s1-201ENSMUST00000021338 Cep164Q5DU05 1446 aa32.41■■■□□ 2.78
Ap4s1-201ENSMUST00000021338 Npm1Q61937 292 aaKnown RBP32.38■■■□□ 2.77
Ap4s1-201ENSMUST00000021338 Kif21aQ9QXL2 1672 aa32.34■■■□□ 2.77
Ap4s1-201ENSMUST00000021338 Camsap1A2AHC3 1581 aa32.34■■■□□ 2.77
Ap4s1-201ENSMUST00000021338 Lrriq1Q0P5X1 1673 aa32.22■■■□□ 2.75
Ap4s1-201ENSMUST00000021338 LrpprcQ6PB66 1392 aaKnown RBP32.15■■■□□ 2.74
Ap4s1-201ENSMUST00000021338 Dhx29Q6PGC1 1365 aaKnown RBP32.07■■■□□ 2.73
Ap4s1-201ENSMUST00000021338 Ccdc88bQ4QRL3 1481 aa32.06■■■□□ 2.72
Ap4s1-201ENSMUST00000021338 PogzQ8BZH4 1409 aaKnown RBP32.01■■■□□ 2.72
Ap4s1-201ENSMUST00000021338 Il27Q8K3I6 234 aa32.01■■■□□ 2.71
Ap4s1-201ENSMUST00000021338 Top2aQ01320 1528 aaKnown RBP32■■■□□ 2.71
Ap4s1-201ENSMUST00000021338 Crocc2F6XLV1 1638 aa31.97■■■□□ 2.71
Ap4s1-201ENSMUST00000021338 Grin2bQ01097 1482 aa31.94■■■□□ 2.7
Ap4s1-201ENSMUST00000021338 HrcG5E8J6 738 aa31.89■■■□□ 2.7
Ap4s1-201ENSMUST00000021338 Urb2E9Q7L1 1524 aaKnown RBP31.89■■■□□ 2.7
Ap4s1-201ENSMUST00000021338 Eif4g3Q80XI3 1579 aaKnown RBP31.86■■■□□ 2.69
Ap4s1-201ENSMUST00000021338 Plb1Q3TTY0 1478 aa31.84■■■□□ 2.69
Ap4s1-201ENSMUST00000021338 Duox2A2AQ99 1517 aa31.83■■■□□ 2.69
Ap4s1-201ENSMUST00000021338 NrkQ9R0G8 1455 aa31.78■■■□□ 2.68
Ap4s1-201ENSMUST00000021338 Efcab5A0JP43 1406 aa31.78■■■□□ 2.68
Ap4s1-201ENSMUST00000021338 Chic1Q8CBW7 227 aa31.78■■■□□ 2.68
Ap4s1-201ENSMUST00000021338 Ift140E9PY46 1464 aa31.75■■■□□ 2.67
Ap4s1-201ENSMUST00000021338 Shroom4Q1W617 1475 aa31.59■■■□□ 2.65
Ap4s1-201ENSMUST00000021338 Samd9lQ69Z37 1561 aa31.56■■■□□ 2.64
Ap4s1-201ENSMUST00000021338 Pbrm1Q8BSQ9 1634 aaKnown RBP31.54■■■□□ 2.64
Ap4s1-201ENSMUST00000021338 Rusc2Q80U22 1514 aa31.49■■■□□ 2.63
Ap4s1-201ENSMUST00000021338 Disp1Q3TDN0 1521 aa31.49■■■□□ 2.63
Ap4s1-201ENSMUST00000021338 Nup160Q9Z0W3 1402 aaKnown RBP31.41■■■□□ 2.62
Ap4s1-201ENSMUST00000021338 PtprkP35822 1457 aa31.41■■■□□ 2.62
Ap4s1-201ENSMUST00000021338 Cc2d2bA0A286YDU8 1405 aa31.38■■■□□ 2.61
Ap4s1-201ENSMUST00000021338 Gpatch8A2A6A1 1505 aa31.35■■■□□ 2.61
Ap4s1-201ENSMUST00000021338 SynmQ70IV5 1561 aa31.3■■■□□ 2.6
Ap4s1-201ENSMUST00000021338 Grin2aP35436 1464 aa31.27■■■□□ 2.6
Ap4s1-201ENSMUST00000021338 Magi3Q9EQJ9 1476 aa31.27■■■□□ 2.6
Ap4s1-201ENSMUST00000021338 Shroom2A2ALU4 1481 aa31.26■■■□□ 2.59
Ap4s1-201ENSMUST00000021338 Rad54l2Q99NG0 1466 aa31.25■■■□□ 2.59
Ap4s1-201ENSMUST00000021338 Setd1bQ8CFT2 1985 aa31.23■■■□□ 2.59
Ap4s1-201ENSMUST00000021338 Rapgef2Q8CHG7 1496 aa31.19■■■□□ 2.58
Ap4s1-201ENSMUST00000021338 Mroh2bQ7M6Y6 1581 aa31.18■■■□□ 2.58
Ap4s1-201ENSMUST00000021338 AqrQ8CFQ3 1481 aaKnown RBP31.14■■■□□ 2.58
Ap4s1-201ENSMUST00000021338 Map3k1P53349 1493 aa31.13■■■□□ 2.57
Ap4s1-201ENSMUST00000021338 Pla2r1Q62028 1487 aa31.13■■■□□ 2.57
Ap4s1-201ENSMUST00000021338 Npm2Q80W85 207 aa31.12■■■□□ 2.57
Ap4s1-201ENSMUST00000021338 Zeb1Q64318 1117 aa31.03■■■□□ 2.56
Ap4s1-201ENSMUST00000021338 Eif4g1Q6NZJ6 1600 aaKnown RBP31.02■■■□□ 2.56
Ap4s1-201ENSMUST00000021338 Arhgap35Q91YM2 1499 aa31■■■□□ 2.55
Ap4s1-201ENSMUST00000021338 Gab3Q8BSM5 595 aa30.97■■■□□ 2.55
Ap4s1-201ENSMUST00000021338 Carmil1Q6EDY6 1374 aa30.96■■■□□ 2.55
Retrieved 100 of 22,080 RNA–protein pairs in 168.9 ms