RNA–Protein interactions for RNA: ENSMUST00000018531.11

Shroom1-201, Transcript of Protein Shroom1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shroom1, Length 2,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1-201ENSMUST00000018531 Gm35339A0A140LHH9 1649 aa28.62■■■□□ 2.17
Shroom1-201ENSMUST00000018531 NischQ80TM9 1593 aa28.24■■■□□ 2.11
Shroom1-201ENSMUST00000018531 Abcc9P70170 1546 aa27.44■■□□□ 1.98
Shroom1-201ENSMUST00000018531 Abcc8B2RUS7 1588 aa27.19■■□□□ 1.94
Shroom1-201ENSMUST00000018531 ScribQ80U72 1612 aa25.93■■□□□ 1.74
Shroom1-201ENSMUST00000018531 Dcaf1Q80TR8 1506 aa25.32■■□□□ 1.64
Shroom1-201ENSMUST00000018531 NacadQ5SWP3 1504 aa25.21■■□□□ 1.63
Shroom1-201ENSMUST00000018531 Kdm5dQ62240 1548 aa25.17■■□□□ 1.62
Shroom1-201ENSMUST00000018531 Ccdc180J3QNE4 1664 aa24.69■■□□□ 1.54
Shroom1-201ENSMUST00000018531 Sycp2Q9CUU3 1500 aa24.68■■□□□ 1.54
Shroom1-201ENSMUST00000018531 Rb1cc1Q9ESK9 1588 aa24.65■■□□□ 1.54
Shroom1-201ENSMUST00000018531 Rhox8Q6VSS7 320 aa24.53■■□□□ 1.52
Shroom1-201ENSMUST00000018531 Baz1aO88379 1555 aa24.39■■□□□ 1.49
Shroom1-201ENSMUST00000018531 Crybg2B7ZCC2 1516 aa24.34■■□□□ 1.49
Shroom1-201ENSMUST00000018531 BicraF8VPZ9 1578 aa24.24■■□□□ 1.47
Shroom1-201ENSMUST00000018531 Rtl1Q7M732 1744 aa23.86■■□□□ 1.41
Shroom1-201ENSMUST00000018531 Zcchc6Q5BLK4 1491 aaKnown RBP23.76■■□□□ 1.39
Shroom1-201ENSMUST00000018531 Smarca2Q6DIC0 1577 aa23.73■■□□□ 1.39
Shroom1-201ENSMUST00000018531 Pds5bQ4VA53 1446 aaKnown RBP23.48■■□□□ 1.35
Shroom1-201ENSMUST00000018531 Smarca4Q3TKT4 1613 aaKnown RBP23.37■■□□□ 1.33
Shroom1-201ENSMUST00000018531 Atad2bE9Q166 1460 aaKnown RBP23.35■■□□□ 1.33
Shroom1-201ENSMUST00000018531 Cecr2E9Q2Z1 1453 aa23.3■■□□□ 1.32
Shroom1-201ENSMUST00000018531 Thoc2B1AZI6 1594 aaKnown RBP23.15■■□□□ 1.3
Shroom1-201ENSMUST00000018531 Iqgap2Q3UQ44 1575 aa23.14■■□□□ 1.3
Shroom1-201ENSMUST00000018531 Brd4Q9ESU6 1400 aaKnown RBP23.03■■□□□ 1.28
Shroom1-201ENSMUST00000018531 Cttnbp2B9EJA2 1648 aa23■■□□□ 1.27
Shroom1-201ENSMUST00000018531 Ercc6F8VPZ5 1481 aa22.97■■□□□ 1.27
Shroom1-201ENSMUST00000018531 CftrP26361 1476 aa22.94■■□□□ 1.26
Shroom1-201ENSMUST00000018531 Synj1Q8CHC4 1574 aa22.93■■□□□ 1.26
Shroom1-201ENSMUST00000018531 Wdr62Q3U3T8 1523 aa22.89■■□□□ 1.26
Shroom1-201ENSMUST00000018531 Ccdc136Q3TVA9 1136 aa22.87■■□□□ 1.25
Shroom1-201ENSMUST00000018531 Frmpd1A2AKB4 1549 aa22.81■■□□□ 1.24
Shroom1-201ENSMUST00000018531 Trim41Q5NCC3 630 aa22.76■■□□□ 1.23
Shroom1-201ENSMUST00000018531 Fam135aQ6NS59 1506 aa22.73■■□□□ 1.23
Shroom1-201ENSMUST00000018531 Cc2d2aQ8CFW7 1633 aa22.71■■□□□ 1.23
Shroom1-201ENSMUST00000018531 Baz1bQ9Z277 1479 aa22.66■■□□□ 1.22
Shroom1-201ENSMUST00000018531 Unc13aQ4KUS2 1712 aa22.61■■□□□ 1.21
Shroom1-201ENSMUST00000018531 Dnajc5bQ9CQ94 199 aa22.59■■□□□ 1.21
Shroom1-201ENSMUST00000018531 Phldb1Q6PDH0 1371 aaKnown RBP22.58■■□□□ 1.2
Shroom1-201ENSMUST00000018531 Top2bQ64511 1612 aa22.39■■□□□ 1.17
Shroom1-201ENSMUST00000018531 Golga3P55937 1487 aa22.37■■□□□ 1.17
Shroom1-201ENSMUST00000018531 Esf1Q3V1V3 845 aaKnown RBP22.35■■□□□ 1.17
Shroom1-201ENSMUST00000018531 Lamc3Q9R0B6 1581 aa22.25■■□□□ 1.15
Shroom1-201ENSMUST00000018531 Rsf1E9PWW9 1441 aaKnown RBP22.21■■□□□ 1.15
Shroom1-201ENSMUST00000018531 Ubl4bQ9CQ84 188 aa22.2■■□□□ 1.14
Shroom1-201ENSMUST00000018531 TnnQ80Z71 1560 aa22.17■■□□□ 1.14
Shroom1-201ENSMUST00000018531 Mrc2Q64449 1479 aa22.11■■□□□ 1.13
Shroom1-201ENSMUST00000018531 Fmn1Q05860 1466 aa22.06■■□□□ 1.12
Shroom1-201ENSMUST00000018531 Kif15Q6P9L6 1387 aa22.05■■□□□ 1.12
Shroom1-201ENSMUST00000018531 Cngb1E1AZ71 1325 aa22.02■■□□□ 1.12
Shroom1-201ENSMUST00000018531 Cux2P70298 1426 aa21.96■■□□□ 1.11
Shroom1-201ENSMUST00000018531 Camsap1A2AHC3 1581 aa21.85■■□□□ 1.09
Shroom1-201ENSMUST00000018531 HrcG5E8J6 738 aa21.85■■□□□ 1.09
Shroom1-201ENSMUST00000018531 Rpgrip1Q9EPQ2 1331 aa21.84■■□□□ 1.09
Shroom1-201ENSMUST00000018531 Ccdc18Q640L5 1455 aa21.83■■□□□ 1.09
Shroom1-201ENSMUST00000018531 Ccdc88bQ4QRL3 1481 aa21.78■■□□□ 1.08
Shroom1-201ENSMUST00000018531 Cep164Q5DU05 1446 aa21.78■■□□□ 1.08
Shroom1-201ENSMUST00000018531 Kif21aQ9QXL2 1672 aa21.77■■□□□ 1.08
Shroom1-201ENSMUST00000018531 Top2aQ01320 1528 aaKnown RBP21.75■■□□□ 1.07
Shroom1-201ENSMUST00000018531 Npm1Q61937 292 aaKnown RBP21.7■■□□□ 1.06
Shroom1-201ENSMUST00000018531 Lrriq1Q0P5X1 1673 aa21.62■■□□□ 1.05
Shroom1-201ENSMUST00000018531 LrpprcQ6PB66 1392 aaKnown RBP21.61■■□□□ 1.05
Shroom1-201ENSMUST00000018531 Chic1Q8CBW7 227 aa21.59■■□□□ 1.05
Shroom1-201ENSMUST00000018531 Grin2bQ01097 1482 aa21.58■■□□□ 1.04
Shroom1-201ENSMUST00000018531 PogzQ8BZH4 1409 aaKnown RBP21.56■■□□□ 1.04
Shroom1-201ENSMUST00000018531 Crocc2F6XLV1 1638 aa21.54■■□□□ 1.04
Shroom1-201ENSMUST00000018531 Dhx29Q6PGC1 1365 aaKnown RBP21.53■■□□□ 1.04
Shroom1-201ENSMUST00000018531 Ehmt2Q9Z148 1263 aaKnown RBP21.52■■□□□ 1.04
Shroom1-201ENSMUST00000018531 NrkQ9R0G8 1455 aa21.52■■□□□ 1.04
Shroom1-201ENSMUST00000018531 Il27Q8K3I6 234 aa21.47■■□□□ 1.03
Shroom1-201ENSMUST00000018531 Acin1Q9JIX8 1338 aaKnown RBP21.45■■□□□ 1.02
Shroom1-201ENSMUST00000018531 Duox2A2AQ99 1517 aa21.44■■□□□ 1.02
Shroom1-201ENSMUST00000018531 Efcab5A0JP43 1406 aa21.43■■□□□ 1.02
Shroom1-201ENSMUST00000018531 Urb2E9Q7L1 1524 aaKnown RBP21.41■■□□□ 1.02
Shroom1-201ENSMUST00000018531 Shroom4Q1W617 1475 aa21.39■■□□□ 1.01
Shroom1-201ENSMUST00000018531 Eif4g3Q80XI3 1579 aaKnown RBP21.38■■□□□ 1.01
Shroom1-201ENSMUST00000018531 Plb1Q3TTY0 1478 aa21.37■■□□□ 1.01
Shroom1-201ENSMUST00000018531 Ift140E9PY46 1464 aa21.32■■□□□ 1
Shroom1-201ENSMUST00000018531 Pbrm1Q8BSQ9 1634 aaKnown RBP21.3■■□□□ 1
Shroom1-201ENSMUST00000018531 Samd9lQ69Z37 1561 aa21.3■■□□□ 1
Shroom1-201ENSMUST00000018531 PtprkP35822 1457 aa21.27■□□□□ 0.99
Shroom1-201ENSMUST00000018531 Rapgef2Q8CHG7 1496 aa21.25■□□□□ 0.99
Shroom1-201ENSMUST00000018531 Gpatch8A2A6A1 1505 aa21.23■□□□□ 0.99
Shroom1-201ENSMUST00000018531 Disp1Q3TDN0 1521 aa21.18■□□□□ 0.98
Shroom1-201ENSMUST00000018531 Eif4g1Q6NZJ6 1600 aaKnown RBP21.17■□□□□ 0.98
Shroom1-201ENSMUST00000018531 SynmQ70IV5 1561 aa21.16■□□□□ 0.98
Shroom1-201ENSMUST00000018531 Rusc2Q80U22 1514 aa21.15■□□□□ 0.98
Shroom1-201ENSMUST00000018531 Setd1bQ8CFT2 1985 aa21.14■□□□□ 0.97
Shroom1-201ENSMUST00000018531 Map3k1P53349 1493 aa21.13■□□□□ 0.97
Shroom1-201ENSMUST00000018531 Nup160Q9Z0W3 1402 aaKnown RBP21.13■□□□□ 0.97
Shroom1-201ENSMUST00000018531 Mroh2bQ7M6Y6 1581 aa21.12■□□□□ 0.97
Shroom1-201ENSMUST00000018531 Magi3Q9EQJ9 1476 aa21.09■□□□□ 0.97
Shroom1-201ENSMUST00000018531 Cc2d2bA0A286YDU8 1405 aa21.06■□□□□ 0.96
Shroom1-201ENSMUST00000018531 AqrQ8CFQ3 1481 aaKnown RBP21.06■□□□□ 0.96
Shroom1-201ENSMUST00000018531 Grin2aP35436 1464 aa21.05■□□□□ 0.96
Shroom1-201ENSMUST00000018531 Arhgap35Q91YM2 1499 aa21.05■□□□□ 0.96
Shroom1-201ENSMUST00000018531 Rad54l2Q99NG0 1466 aa21.04■□□□□ 0.96
Shroom1-201ENSMUST00000018531 Cep162Q6ZQ06 1403 aa21.04■□□□□ 0.96
Shroom1-201ENSMUST00000018531 Gab3Q8BSM5 595 aa21.02■□□□□ 0.96
Shroom1-201ENSMUST00000018531 Npm2Q80W85 207 aa21.01■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 78.5 ms