RNA–Protein interactions for RNA: ENSMUST00000002678.9

Tgfb1-201, Transcript of Transforming growth factor beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tgfb1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1-201ENSMUST00000002678 NischQ80TM9 1593 aa34.78■■■■□ 3.16
Tgfb1-201ENSMUST00000002678 Gm35339A0A140LHH9 1649 aa34.43■■■■□ 3.1
Tgfb1-201ENSMUST00000002678 Abcc9P70170 1546 aa33.88■■■■□ 3.01
Tgfb1-201ENSMUST00000002678 Abcc8B2RUS7 1588 aa33.14■■■□□ 2.9
Tgfb1-201ENSMUST00000002678 Rtl1Q7M732 1744 aa32.28■■■□□ 2.76
Tgfb1-201ENSMUST00000002678 Rhox8Q6VSS7 320 aa32.1■■■□□ 2.73
Tgfb1-201ENSMUST00000002678 Ccdc180J3QNE4 1664 aa31.64■■■□□ 2.66
Tgfb1-201ENSMUST00000002678 ScribQ80U72 1612 aa31.24■■■□□ 2.59
Tgfb1-201ENSMUST00000002678 Dcaf1Q80TR8 1506 aa31.02■■■□□ 2.56
Tgfb1-201ENSMUST00000002678 Zcchc6Q5BLK4 1491 aaKnown RBP30.98■■■□□ 2.55
Tgfb1-201ENSMUST00000002678 Rb1cc1Q9ESK9 1588 aa30.49■■■□□ 2.47
Tgfb1-201ENSMUST00000002678 Kdm5dQ62240 1548 aa30.48■■■□□ 2.47
Tgfb1-201ENSMUST00000002678 NacadQ5SWP3 1504 aa30.3■■■□□ 2.44
Tgfb1-201ENSMUST00000002678 Baz1aO88379 1555 aa30.21■■■□□ 2.43
Tgfb1-201ENSMUST00000002678 Rpgrip1Q9EPQ2 1331 aa30.16■■■□□ 2.42
Tgfb1-201ENSMUST00000002678 HrcG5E8J6 738 aa30.07■■■□□ 2.4
Tgfb1-201ENSMUST00000002678 Crybg2B7ZCC2 1516 aa29.73■■■□□ 2.35
Tgfb1-201ENSMUST00000002678 Ccdc136Q3TVA9 1136 aa29.71■■■□□ 2.35
Tgfb1-201ENSMUST00000002678 Sycp2Q9CUU3 1500 aa29.69■■■□□ 2.34
Tgfb1-201ENSMUST00000002678 Smarca2Q6DIC0 1577 aa29.55■■■□□ 2.32
Tgfb1-201ENSMUST00000002678 Acin1Q9JIX8 1338 aaKnown RBP29.54■■■□□ 2.32
Tgfb1-201ENSMUST00000002678 Trim41Q5NCC3 630 aa29.3■■■□□ 2.28
Tgfb1-201ENSMUST00000002678 BicraF8VPZ9 1578 aa29.15■■■□□ 2.26
Tgfb1-201ENSMUST00000002678 Cep164Q5DU05 1446 aa29.14■■■□□ 2.26
Tgfb1-201ENSMUST00000002678 Ehmt2Q9Z148 1263 aaKnown RBP28.98■■■□□ 2.23
Tgfb1-201ENSMUST00000002678 Brd4Q9ESU6 1400 aaKnown RBP28.82■■■□□ 2.2
Tgfb1-201ENSMUST00000002678 Cecr2E9Q2Z1 1453 aa28.75■■■□□ 2.19
Tgfb1-201ENSMUST00000002678 Rsf1E9PWW9 1441 aaKnown RBP28.61■■■□□ 2.17
Tgfb1-201ENSMUST00000002678 Golga3P55937 1487 aa28.56■■■□□ 2.16
Tgfb1-201ENSMUST00000002678 Synj1Q8CHC4 1574 aa28.5■■■□□ 2.15
Tgfb1-201ENSMUST00000002678 Cngb1E1AZ71 1325 aa28.44■■■□□ 2.14
Tgfb1-201ENSMUST00000002678 Chic1Q8CBW7 227 aa28.44■■■□□ 2.14
Tgfb1-201ENSMUST00000002678 Ccdc88bQ4QRL3 1481 aa28.37■■■□□ 2.13
Tgfb1-201ENSMUST00000002678 CftrP26361 1476 aa28.34■■■□□ 2.13
Tgfb1-201ENSMUST00000002678 Top2bQ64511 1612 aa28.27■■■□□ 2.12
Tgfb1-201ENSMUST00000002678 Pcgf6Q99NA9 353 aa28.26■■■□□ 2.11
Tgfb1-201ENSMUST00000002678 Smarca4Q3TKT4 1613 aaKnown RBP28.24■■■□□ 2.11
Tgfb1-201ENSMUST00000002678 Cttnbp2B9EJA2 1648 aa28.22■■■□□ 2.11
Tgfb1-201ENSMUST00000002678 Gab3Q8BSM5 595 aa28.11■■■□□ 2.09
Tgfb1-201ENSMUST00000002678 Esf1Q3V1V3 845 aaKnown RBP27.97■■■□□ 2.07
Tgfb1-201ENSMUST00000002678 Atad2bE9Q166 1460 aaKnown RBP27.95■■■□□ 2.06
Tgfb1-201ENSMUST00000002678 Iqgap2Q3UQ44 1575 aa27.93■■■□□ 2.06
Tgfb1-201ENSMUST00000002678 Pds5bQ4VA53 1446 aaKnown RBP27.89■■■□□ 2.05
Tgfb1-201ENSMUST00000002678 Cc2d2aQ8CFW7 1633 aa27.87■■■□□ 2.05
Tgfb1-201ENSMUST00000002678 NefmP08553 848 aa27.82■■■□□ 2.04
Tgfb1-201ENSMUST00000002678 Fmn1Q05860 1466 aa27.8■■■□□ 2.04
Tgfb1-201ENSMUST00000002678 Rapgef2Q8CHG7 1496 aa27.77■■■□□ 2.04
Tgfb1-201ENSMUST00000002678 Supt5hO55201 1082 aaKnown RBP27.75■■■□□ 2.03
Tgfb1-201ENSMUST00000002678 Top2aQ01320 1528 aaKnown RBP27.73■■■□□ 2.03
Tgfb1-201ENSMUST00000002678 Mier1Q5UAK0 511 aa27.68■■■□□ 2.02
Tgfb1-201ENSMUST00000002678 Frmpd1A2AKB4 1549 aa27.5■■□□□ 1.99
Tgfb1-201ENSMUST00000002678 Cep162Q6ZQ06 1403 aa27.48■■□□□ 1.99
Tgfb1-201ENSMUST00000002678 Wdr62Q3U3T8 1523 aa27.48■■□□□ 1.99
Tgfb1-201ENSMUST00000002678 Zeb1Q64318 1117 aa27.36■■□□□ 1.97
Tgfb1-201ENSMUST00000002678 Eif4g1Q6NZJ6 1600 aaKnown RBP27.35■■□□□ 1.97
Tgfb1-201ENSMUST00000002678 TnnQ80Z71 1560 aa27.33■■□□□ 1.97
Tgfb1-201ENSMUST00000002678 Ercc6F8VPZ5 1481 aa27.33■■□□□ 1.97
Tgfb1-201ENSMUST00000002678 Thoc2B1AZI6 1594 aaKnown RBP27.22■■□□□ 1.95
Tgfb1-201ENSMUST00000002678 Unc13aQ4KUS2 1712 aa27.18■■□□□ 1.94
Tgfb1-201ENSMUST00000002678 UbtfP25976 765 aaKnown RBP27.18■■□□□ 1.94
Tgfb1-201ENSMUST00000002678 Sall2Q9QX96 1004 aa27.09■■□□□ 1.93
Tgfb1-201ENSMUST00000002678 Myt1lP97500 1187 aa27.08■■□□□ 1.93
Tgfb1-201ENSMUST00000002678 Npm2Q80W85 207 aa27.07■■□□□ 1.92
Tgfb1-201ENSMUST00000002678 Lamc3Q9R0B6 1581 aa27.04■■□□□ 1.92
Tgfb1-201ENSMUST00000002678 Neurod1Q60867 357 aa27.04■■□□□ 1.92
Tgfb1-201ENSMUST00000002678 Clip1Q922J3 1391 aa27.03■■□□□ 1.92
Tgfb1-201ENSMUST00000002678 NrkQ9R0G8 1455 aa27■■□□□ 1.91
Tgfb1-201ENSMUST00000002678 Arhgap35Q91YM2 1499 aa26.98■■□□□ 1.91
Tgfb1-201ENSMUST00000002678 Las1lA2BE28 776 aaKnown RBP26.97■■□□□ 1.91
Tgfb1-201ENSMUST00000002678 Phldb1Q6PDH0 1371 aaKnown RBP26.96■■□□□ 1.91
Tgfb1-201ENSMUST00000002678 Kif15Q6P9L6 1387 aa26.94■■□□□ 1.9
Tgfb1-201ENSMUST00000002678 Ncapd3Q6ZQK0 1506 aa26.9■■□□□ 1.9
Tgfb1-201ENSMUST00000002678 PtprkP35822 1457 aa26.86■■□□□ 1.89
Tgfb1-201ENSMUST00000002678 Fam135aQ6NS59 1506 aa26.84■■□□□ 1.89
Tgfb1-201ENSMUST00000002678 Map3k1P53349 1493 aa26.83■■□□□ 1.89
Tgfb1-201ENSMUST00000002678 Shroom4Q1W617 1475 aa26.82■■□□□ 1.88
Tgfb1-201ENSMUST00000002678 Eea1Q8BL66 1411 aa26.8■■□□□ 1.88
Tgfb1-201ENSMUST00000002678 Camsap1A2AHC3 1581 aa26.78■■□□□ 1.88
Tgfb1-201ENSMUST00000002678 Ccdc18Q640L5 1455 aa26.77■■□□□ 1.88
Tgfb1-201ENSMUST00000002678 Plekhg3Q4VAC9 1341 aa26.76■■□□□ 1.87
Tgfb1-201ENSMUST00000002678 Arap1Q4LDD4 1452 aa26.76■■□□□ 1.87
Tgfb1-201ENSMUST00000002678 ClspnQ80YR7 1315 aa26.75■■□□□ 1.87
Tgfb1-201ENSMUST00000002678 Ubl4bQ9CQ84 188 aa26.74■■□□□ 1.87
Tgfb1-201ENSMUST00000002678 Aebp2Q9Z248 504 aaKnown RBP26.74■■□□□ 1.87
Tgfb1-201ENSMUST00000002678 Arhgef5E9Q7D5 1581 aa26.72■■□□□ 1.87
Tgfb1-201ENSMUST00000002678 TonslQ6NZL6 1363 aa26.71■■□□□ 1.87
Tgfb1-201ENSMUST00000002678 Wdr66E9Q743 1299 aa26.68■■□□□ 1.86
Tgfb1-201ENSMUST00000002678 Il27Q8K3I6 234 aa26.68■■□□□ 1.86
Tgfb1-201ENSMUST00000002678 Cux2P70298 1426 aa26.63■■□□□ 1.85
Tgfb1-201ENSMUST00000002678 Anks4bQ8K3X6 423 aa26.62■■□□□ 1.85
Tgfb1-201ENSMUST00000002678 Dnajc5bQ9CQ94 199 aa26.62■■□□□ 1.85
Tgfb1-201ENSMUST00000002678 Grin2bQ01097 1482 aa26.62■■□□□ 1.85
Tgfb1-201ENSMUST00000002678 Setd5Q5XJV7 1441 aa26.59■■□□□ 1.85
Tgfb1-201ENSMUST00000002678 Kdm5bQ80Y84 1544 aa26.57■■□□□ 1.84
Tgfb1-201ENSMUST00000002678 Mroh2bQ7M6Y6 1581 aa26.56■■□□□ 1.84
Tgfb1-201ENSMUST00000002678 Erich3F6QRE9 1637 aa26.56■■□□□ 1.84
Tgfb1-201ENSMUST00000002678 Tiam1Q60610 1591 aa26.56■■□□□ 1.84
Tgfb1-201ENSMUST00000002678 AqrQ8CFQ3 1481 aaKnown RBP26.53■■□□□ 1.84
Tgfb1-201ENSMUST00000002678 TchhA0A0B4J1F9 1599 aa26.52■■□□□ 1.84
Tgfb1-201ENSMUST00000002678 Ankrd26Q811D2 1581 aa26.46■■□□□ 1.83
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms