RNA–Protein interactions for RNA: ENSMUST00000001706.6

Hoxc9-201, Transcript of Homeobox protein Hox-C9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc9, Length 2,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9-201ENSMUST00000001706 Gm35339A0A140LHH9 1649 aa31.73■■■□□ 2.67
Hoxc9-201ENSMUST00000001706 NischQ80TM9 1593 aa31.72■■■□□ 2.67
Hoxc9-201ENSMUST00000001706 Abcc9P70170 1546 aa30.88■■■□□ 2.53
Hoxc9-201ENSMUST00000001706 Abcc8B2RUS7 1588 aa30.35■■■□□ 2.45
Hoxc9-201ENSMUST00000001706 Rtl1Q7M732 1744 aa30.09■■■□□ 2.41
Hoxc9-201ENSMUST00000001706 Rpgrip1Q9EPQ2 1331 aa30.03■■■□□ 2.4
Hoxc9-201ENSMUST00000001706 Ccdc180J3QNE4 1664 aa29.7■■■□□ 2.35
Hoxc9-201ENSMUST00000001706 Rhox8Q6VSS7 320 aa29.34■■■□□ 2.29
Hoxc9-201ENSMUST00000001706 Acin1Q9JIX8 1338 aaKnown RBP28.95■■■□□ 2.22
Hoxc9-201ENSMUST00000001706 Zcchc6Q5BLK4 1491 aaKnown RBP28.62■■■□□ 2.17
Hoxc9-201ENSMUST00000001706 ScribQ80U72 1612 aa28.58■■■□□ 2.16
Hoxc9-201ENSMUST00000001706 Dcaf1Q80TR8 1506 aa28.38■■■□□ 2.13
Hoxc9-201ENSMUST00000001706 Pcgf6Q99NA9 353 aa28.23■■■□□ 2.11
Hoxc9-201ENSMUST00000001706 HrcG5E8J6 738 aa28.17■■■□□ 2.1
Hoxc9-201ENSMUST00000001706 Kdm5dQ62240 1548 aa27.9■■■□□ 2.06
Hoxc9-201ENSMUST00000001706 Ehmt2Q9Z148 1263 aaKnown RBP27.86■■■□□ 2.05
Hoxc9-201ENSMUST00000001706 NacadQ5SWP3 1504 aa27.81■■■□□ 2.04
Hoxc9-201ENSMUST00000001706 Rb1cc1Q9ESK9 1588 aa27.75■■■□□ 2.03
Hoxc9-201ENSMUST00000001706 Trim41Q5NCC3 630 aa27.64■■■□□ 2.02
Hoxc9-201ENSMUST00000001706 Baz1aO88379 1555 aa27.47■■□□□ 1.99
Hoxc9-201ENSMUST00000001706 Supt5hO55201 1082 aaKnown RBP27.4■■□□□ 1.98
Hoxc9-201ENSMUST00000001706 Crybg2B7ZCC2 1516 aa27.22■■□□□ 1.95
Hoxc9-201ENSMUST00000001706 Sycp2Q9CUU3 1500 aa27.22■■□□□ 1.95
Hoxc9-201ENSMUST00000001706 Neurod1Q60867 357 aa27.16■■□□□ 1.94
Hoxc9-201ENSMUST00000001706 Las1lA2BE28 776 aaKnown RBP27.12■■□□□ 1.93
Hoxc9-201ENSMUST00000001706 Ccdc136Q3TVA9 1136 aa27.06■■□□□ 1.92
Hoxc9-201ENSMUST00000001706 Cep164Q5DU05 1446 aa26.99■■□□□ 1.91
Hoxc9-201ENSMUST00000001706 Smarca2Q6DIC0 1577 aa26.81■■□□□ 1.88
Hoxc9-201ENSMUST00000001706 NefmP08553 848 aa26.77■■□□□ 1.88
Hoxc9-201ENSMUST00000001706 BicraF8VPZ9 1578 aa26.64■■□□□ 1.86
Hoxc9-201ENSMUST00000001706 Anks4bQ8K3X6 423 aa26.6■■□□□ 1.85
Hoxc9-201ENSMUST00000001706 Zeb1Q64318 1117 aa26.56■■□□□ 1.84
Hoxc9-201ENSMUST00000001706 Cngb1E1AZ71 1325 aa26.51■■□□□ 1.83
Hoxc9-201ENSMUST00000001706 Myt1Q8CFC2 1127 aa26.5■■□□□ 1.83
Hoxc9-201ENSMUST00000001706 1700123L14RikQ3V2K7 440 aa26.47■■□□□ 1.83
Hoxc9-201ENSMUST00000001706 Sall2Q9QX96 1004 aa26.46■■□□□ 1.83
Hoxc9-201ENSMUST00000001706 Mier1Q5UAK0 511 aa26.35■■□□□ 1.81
Hoxc9-201ENSMUST00000001706 Csrnp3P59055 597 aa26.24■■□□□ 1.79
Hoxc9-201ENSMUST00000001706 CenpbP27790 599 aa26.22■■□□□ 1.79
Hoxc9-201ENSMUST00000001706 Aplp2Q06335 707 aa26.19■■□□□ 1.78
Hoxc9-201ENSMUST00000001706 Rsf1E9PWW9 1441 aaKnown RBP26.16■■□□□ 1.78
Hoxc9-201ENSMUST00000001706 Cecr2E9Q2Z1 1453 aa26.14■■□□□ 1.78
Hoxc9-201ENSMUST00000001706 Brd4Q9ESU6 1400 aaKnown RBP26.07■■□□□ 1.76
Hoxc9-201ENSMUST00000001706 Chic1Q8CBW7 227 aa26.04■■□□□ 1.76
Hoxc9-201ENSMUST00000001706 Cdk11bP24788 784 aaKnown RBP25.98■■□□□ 1.75
Hoxc9-201ENSMUST00000001706 Gab3Q8BSM5 595 aa25.97■■□□□ 1.75
Hoxc9-201ENSMUST00000001706 Smarca4Q3TKT4 1613 aaKnown RBP25.91■■□□□ 1.74
Hoxc9-201ENSMUST00000001706 ClspnQ80YR7 1315 aa25.89■■□□□ 1.74
Hoxc9-201ENSMUST00000001706 Nop58Q6DFW4 536 aaKnown RBP25.88■■□□□ 1.73
Hoxc9-201ENSMUST00000001706 Synj1Q8CHC4 1574 aa25.88■■□□□ 1.73
Hoxc9-201ENSMUST00000001706 Ccdc88bQ4QRL3 1481 aa25.82■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Wdr66E9Q743 1299 aa25.81■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 CftrP26361 1476 aa25.81■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Aebp2Q9Z248 504 aaKnown RBP25.79■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Cttnbp2B9EJA2 1648 aa25.79■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Golga3P55937 1487 aa25.78■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Atad2bE9Q166 1460 aaKnown RBP25.63■■□□□ 1.69
Hoxc9-201ENSMUST00000001706 Pds5bQ4VA53 1446 aaKnown RBP25.62■■□□□ 1.69
Hoxc9-201ENSMUST00000001706 Iqgap2Q3UQ44 1575 aa25.59■■□□□ 1.69
Hoxc9-201ENSMUST00000001706 UbtfP25976 765 aaKnown RBP25.48■■□□□ 1.67
Hoxc9-201ENSMUST00000001706 Top2bQ64511 1612 aa25.46■■□□□ 1.67
Hoxc9-201ENSMUST00000001706 TonslQ6NZL6 1363 aa25.43■■□□□ 1.66
Hoxc9-201ENSMUST00000001706 Rapgef2Q8CHG7 1496 aa25.35■■□□□ 1.65
Hoxc9-201ENSMUST00000001706 DiexfQ8BTT6 772 aaKnown RBP25.34■■□□□ 1.65
Hoxc9-201ENSMUST00000001706 Tnnt3Q9QZ47 272 aa25.29■■□□□ 1.64
Hoxc9-201ENSMUST00000001706 Gm38655A0A286YDK6 273 aa25.27■■□□□ 1.64
Hoxc9-201ENSMUST00000001706 Esf1Q3V1V3 845 aaKnown RBP25.24■■□□□ 1.63
Hoxc9-201ENSMUST00000001706 Wdr62Q3U3T8 1523 aa25.2■■□□□ 1.62
Hoxc9-201ENSMUST00000001706 Ppargc1bQ8VHJ7 1014 aa25.2■■□□□ 1.62
Hoxc9-201ENSMUST00000001706 Frmpd1A2AKB4 1549 aa25.13■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Bcl11aQ9QYE3 773 aa25.12■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Fam71e1A1L3C1 212 aa25.11■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Ercc6F8VPZ5 1481 aa25.1■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Cc2d2aQ8CFW7 1633 aa25.1■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Cep162Q6ZQ06 1403 aa25.07■■□□□ 1.6
Hoxc9-201ENSMUST00000001706 Fmn1Q05860 1466 aa25.07■■□□□ 1.6
Hoxc9-201ENSMUST00000001706 Ncapd3Q6ZQK0 1506 aa25.06■■□□□ 1.6
Hoxc9-201ENSMUST00000001706 Thoc2B1AZI6 1594 aaKnown RBP25.01■■□□□ 1.6
Hoxc9-201ENSMUST00000001706 Hnrnpul2Q00PI9 745 aaKnown RBP25.01■■□□□ 1.59
Hoxc9-201ENSMUST00000001706 Top2aQ01320 1528 aaKnown RBP24.98■■□□□ 1.59
Hoxc9-201ENSMUST00000001706 TnnQ80Z71 1560 aa24.93■■□□□ 1.58
Hoxc9-201ENSMUST00000001706 SafbD3YXK2 937 aaKnown RBP24.89■■□□□ 1.57
Hoxc9-201ENSMUST00000001706 Unc13aQ4KUS2 1712 aa24.87■■□□□ 1.57
Hoxc9-201ENSMUST00000001706 Clip1Q922J3 1391 aa24.85■■□□□ 1.57
Hoxc9-201ENSMUST00000001706 Anp32aO35381 247 aa24.83■■□□□ 1.57
Hoxc9-201ENSMUST00000001706 Rtl5Q5DTT4 599 aa24.82■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Lamc3Q9R0B6 1581 aa24.82■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Mapk8ip2Q9ERE9 830 aa24.81■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Myt1lP97500 1187 aa24.8■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Eif4g1Q6NZJ6 1600 aaKnown RBP24.78■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Stra8P70278 393 aa24.76■■□□□ 1.55
Hoxc9-201ENSMUST00000001706 Kdm5bQ80Y84 1544 aa24.74■■□□□ 1.55
Hoxc9-201ENSMUST00000001706 Plekhg3Q4VAC9 1341 aa24.7■■□□□ 1.55
Hoxc9-201ENSMUST00000001706 Fam135aQ6NS59 1506 aa24.69■■□□□ 1.54
Hoxc9-201ENSMUST00000001706 Phldb1Q6PDH0 1371 aaKnown RBP24.69■■□□□ 1.54
Hoxc9-201ENSMUST00000001706 Znf710Q3U288 666 aa24.68■■□□□ 1.54
Hoxc9-201ENSMUST00000001706 Ap3b1Q9Z1T1 1105 aa24.62■■□□□ 1.53
Hoxc9-201ENSMUST00000001706 Rpap1Q80TE0 1409 aa24.59■■□□□ 1.53
Hoxc9-201ENSMUST00000001706 Npm2Q80W85 207 aa24.58■■□□□ 1.53
Hoxc9-201ENSMUST00000001706 Kif15Q6P9L6 1387 aa24.56■■□□□ 1.52
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms