RNA–Protein interactions for RNA: ENSMUST00000000767.5

Rpa1-201, Transcript of Replication protein A 70 kDa DNA-binding subunit, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rpa1, Length 2,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1-201ENSMUST00000000767 NischQ80TM9 1593 aa18.42■□□□□ 0.54
Rpa1-201ENSMUST00000000767 Gm35339A0A140LHH9 1649 aa17.93■□□□□ 0.46
Rpa1-201ENSMUST00000000767 Abcc9P70170 1546 aa17.86■□□□□ 0.45
Rpa1-201ENSMUST00000000767 Abcc8B2RUS7 1588 aa17.42■□□□□ 0.38
Rpa1-201ENSMUST00000000767 Rhox8Q6VSS7 320 aa17.37■□□□□ 0.37
Rpa1-201ENSMUST00000000767 Rtl1Q7M732 1744 aa17.11■□□□□ 0.33
Rpa1-201ENSMUST00000000767 Ccdc180J3QNE4 1664 aa16.87■□□□□ 0.29
Rpa1-201ENSMUST00000000767 Zcchc6Q5BLK4 1491 aaKnown RBP16.47■□□□□ 0.23
Rpa1-201ENSMUST00000000767 Rpgrip1Q9EPQ2 1331 aa16.29■□□□□ 0.2
Rpa1-201ENSMUST00000000767 Dcaf1Q80TR8 1506 aa16.24■□□□□ 0.19
Rpa1-201ENSMUST00000000767 Rb1cc1Q9ESK9 1588 aa16.15■□□□□ 0.18
Rpa1-201ENSMUST00000000767 ScribQ80U72 1612 aa16.14■□□□□ 0.17
Rpa1-201ENSMUST00000000767 Ccdc136Q3TVA9 1136 aa16.09■□□□□ 0.17
Rpa1-201ENSMUST00000000767 HrcG5E8J6 738 aa16.08■□□□□ 0.16
Rpa1-201ENSMUST00000000767 Acin1Q9JIX8 1338 aaKnown RBP16.01■□□□□ 0.15
Rpa1-201ENSMUST00000000767 Ehmt2Q9Z148 1263 aaKnown RBP15.97■□□□□ 0.15
Rpa1-201ENSMUST00000000767 Baz1aO88379 1555 aa15.95■□□□□ 0.14
Rpa1-201ENSMUST00000000767 Kdm5dQ62240 1548 aa15.91■□□□□ 0.14
Rpa1-201ENSMUST00000000767 Trim41Q5NCC3 630 aa15.78■□□□□ 0.12
Rpa1-201ENSMUST00000000767 NacadQ5SWP3 1504 aa15.75■□□□□ 0.11
Rpa1-201ENSMUST00000000767 Smarca2Q6DIC0 1577 aa15.6■□□□□ 0.09
Rpa1-201ENSMUST00000000767 Crybg2B7ZCC2 1516 aa15.57■□□□□ 0.08
Rpa1-201ENSMUST00000000767 Cep164Q5DU05 1446 aa15.55■□□□□ 0.08
Rpa1-201ENSMUST00000000767 Pcgf6Q99NA9 353 aa15.45■□□□□ 0.06
Rpa1-201ENSMUST00000000767 Sycp2Q9CUU3 1500 aa15.4■□□□□ 0.06
Rpa1-201ENSMUST00000000767 Cngb1E1AZ71 1325 aa15.38■□□□□ 0.05
Rpa1-201ENSMUST00000000767 Chic1Q8CBW7 227 aa15.32■□□□□ 0.04
Rpa1-201ENSMUST00000000767 Rsf1E9PWW9 1441 aaKnown RBP15.31■□□□□ 0.04
Rpa1-201ENSMUST00000000767 Gab3Q8BSM5 595 aa15.3■□□□□ 0.04
Rpa1-201ENSMUST00000000767 Brd4Q9ESU6 1400 aaKnown RBP15.28■□□□□ 0.04
Rpa1-201ENSMUST00000000767 Cecr2E9Q2Z1 1453 aa15.22■□□□□ 0.03
Rpa1-201ENSMUST00000000767 Supt5hO55201 1082 aaKnown RBP15.19■□□□□ 0.02
Rpa1-201ENSMUST00000000767 Golga3P55937 1487 aa15.18■□□□□ 0.02
Rpa1-201ENSMUST00000000767 Ccdc88bQ4QRL3 1481 aa15.18■□□□□ 0.02
Rpa1-201ENSMUST00000000767 Synj1Q8CHC4 1574 aa15.13■□□□□ 0.01
Rpa1-201ENSMUST00000000767 Esf1Q3V1V3 845 aaKnown RBP15.07■□□□□ 0
Rpa1-201ENSMUST00000000767 BicraF8VPZ9 1578 aa15.03■□□□□ -0
Rpa1-201ENSMUST00000000767 Mier1Q5UAK0 511 aa15.02□□□□□ -0.01
Rpa1-201ENSMUST00000000767 Zeb1Q64318 1117 aa15.01□□□□□ -0.01
Rpa1-201ENSMUST00000000767 CftrP26361 1476 aa15□□□□□ -0.01
Rpa1-201ENSMUST00000000767 NefmP08553 848 aa15□□□□□ -0.01
Rpa1-201ENSMUST00000000767 Top2bQ64511 1612 aa14.94□□□□□ -0.02
Rpa1-201ENSMUST00000000767 Cttnbp2B9EJA2 1648 aa14.89□□□□□ -0.03
Rpa1-201ENSMUST00000000767 Cc2d2aQ8CFW7 1633 aa14.83□□□□□ -0.04
Rpa1-201ENSMUST00000000767 Neurod1Q60867 357 aa14.82□□□□□ -0.04
Rpa1-201ENSMUST00000000767 UbtfP25976 765 aaKnown RBP14.79□□□□□ -0.04
Rpa1-201ENSMUST00000000767 Smarca4Q3TKT4 1613 aaKnown RBP14.78□□□□□ -0.04
Rpa1-201ENSMUST00000000767 Sall2Q9QX96 1004 aa14.77□□□□□ -0.04
Rpa1-201ENSMUST00000000767 Rapgef2Q8CHG7 1496 aa14.77□□□□□ -0.04
Rpa1-201ENSMUST00000000767 Fmn1Q05860 1466 aa14.73□□□□□ -0.05
Rpa1-201ENSMUST00000000767 Myt1lP97500 1187 aa14.7□□□□□ -0.06
Rpa1-201ENSMUST00000000767 Top2aQ01320 1528 aaKnown RBP14.69□□□□□ -0.06
Rpa1-201ENSMUST00000000767 Cep162Q6ZQ06 1403 aa14.66□□□□□ -0.06
Rpa1-201ENSMUST00000000767 Las1lA2BE28 776 aaKnown RBP14.65□□□□□ -0.06
Rpa1-201ENSMUST00000000767 Npm2Q80W85 207 aa14.62□□□□□ -0.07
Rpa1-201ENSMUST00000000767 Wdr66E9Q743 1299 aa14.62□□□□□ -0.07
Rpa1-201ENSMUST00000000767 Iqgap2Q3UQ44 1575 aa14.57□□□□□ -0.08
Rpa1-201ENSMUST00000000767 Aebp2Q9Z248 504 aaKnown RBP14.57□□□□□ -0.08
Rpa1-201ENSMUST00000000767 Clip1Q922J3 1391 aa14.51□□□□□ -0.09
Rpa1-201ENSMUST00000000767 Plekhg3Q4VAC9 1341 aa14.5□□□□□ -0.09
Rpa1-201ENSMUST00000000767 ClspnQ80YR7 1315 aa14.48□□□□□ -0.09
Rpa1-201ENSMUST00000000767 Anks4bQ8K3X6 423 aa14.47□□□□□ -0.09
Rpa1-201ENSMUST00000000767 TonslQ6NZL6 1363 aa14.46□□□□□ -0.09
Rpa1-201ENSMUST00000000767 Eif4g1Q6NZJ6 1600 aaKnown RBP14.45□□□□□ -0.1
Rpa1-201ENSMUST00000000767 Atad2bE9Q166 1460 aaKnown RBP14.44□□□□□ -0.1
Rpa1-201ENSMUST00000000767 Ppargc1bQ8VHJ7 1014 aa14.43□□□□□ -0.1
Rpa1-201ENSMUST00000000767 Cdk11bP24788 784 aaKnown RBP14.39□□□□□ -0.11
Rpa1-201ENSMUST00000000767 Nop58Q6DFW4 536 aaKnown RBP14.39□□□□□ -0.11
Rpa1-201ENSMUST00000000767 TnnQ80Z71 1560 aa14.39□□□□□ -0.11
Rpa1-201ENSMUST00000000767 Ncapd3Q6ZQK0 1506 aa14.38□□□□□ -0.11
Rpa1-201ENSMUST00000000767 Arhgap35Q91YM2 1499 aa14.36□□□□□ -0.11
Rpa1-201ENSMUST00000000767 Csrnp3P59055 597 aa14.34□□□□□ -0.11
Rpa1-201ENSMUST00000000767 Pds5bQ4VA53 1446 aaKnown RBP14.34□□□□□ -0.11
Rpa1-201ENSMUST00000000767 PtprkP35822 1457 aa14.32□□□□□ -0.12
Rpa1-201ENSMUST00000000767 Il27Q8K3I6 234 aa14.31□□□□□ -0.12
Rpa1-201ENSMUST00000000767 Ap3b1Q9Z1T1 1105 aa14.31□□□□□ -0.12
Rpa1-201ENSMUST00000000767 Eea1Q8BL66 1411 aa14.3□□□□□ -0.12
Rpa1-201ENSMUST00000000767 NrkQ9R0G8 1455 aa14.29□□□□□ -0.12
Rpa1-201ENSMUST00000000767 1700123L14RikQ3V2K7 440 aa14.28□□□□□ -0.12
Rpa1-201ENSMUST00000000767 Arap1Q4LDD4 1452 aa14.28□□□□□ -0.12
Rpa1-201ENSMUST00000000767 Frmpd1A2AKB4 1549 aa14.26□□□□□ -0.13
Rpa1-201ENSMUST00000000767 Setd5Q5XJV7 1441 aa14.25□□□□□ -0.13
Rpa1-201ENSMUST00000000767 Kif15Q6P9L6 1387 aa14.24□□□□□ -0.13
Rpa1-201ENSMUST00000000767 Lamc3Q9R0B6 1581 aa14.23□□□□□ -0.13
Rpa1-201ENSMUST00000000767 Wdr62Q3U3T8 1523 aa14.23□□□□□ -0.13
Rpa1-201ENSMUST00000000767 Arhgef5E9Q7D5 1581 aa14.22□□□□□ -0.13
Rpa1-201ENSMUST00000000767 Shroom4Q1W617 1475 aa14.21□□□□□ -0.13
Rpa1-201ENSMUST00000000767 Eid3Q3V124 375 aa14.21□□□□□ -0.14
Rpa1-201ENSMUST00000000767 Ccdc18Q640L5 1455 aa14.2□□□□□ -0.14
Rpa1-201ENSMUST00000000767 Map3k1P53349 1493 aa14.17□□□□□ -0.14
Rpa1-201ENSMUST00000000767 Camsap1A2AHC3 1581 aa14.16□□□□□ -0.14
Rpa1-201ENSMUST00000000767 Kdm5bQ80Y84 1544 aa14.15□□□□□ -0.14
Rpa1-201ENSMUST00000000767 Tiam1Q60610 1591 aa14.13□□□□□ -0.15
Rpa1-201ENSMUST00000000767 Ercc6F8VPZ5 1481 aa14.12□□□□□ -0.15
Rpa1-201ENSMUST00000000767 Aplp2Q06335 707 aa14.11□□□□□ -0.15
Rpa1-201ENSMUST00000000767 BlmO88700 1416 aa14.11□□□□□ -0.15
Rpa1-201ENSMUST00000000767 Grin2bQ01097 1482 aa14.1□□□□□ -0.15
Rpa1-201ENSMUST00000000767 Mroh2bQ7M6Y6 1581 aa14.09□□□□□ -0.15
Rpa1-201ENSMUST00000000767 Naip1Q9QWK5 1403 aa14.09□□□□□ -0.15
Rpa1-201ENSMUST00000000767 Baz1bQ9Z277 1479 aa14.08□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 277 ms