RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	ENV11	P53246	860 aa		5.26	□□□□□ -1.57
RUD3	YOR216C	NOG1	Q02892	647 aa	Known RBP	5.26	□□□□□ -1.57
RUD3	YOR216C	UTP5	Q04177	643 aa	Known RBP	5.26	□□□□□ -1.57
RUD3	YOR216C	RSA3	Q05942	220 aa	Known RBP	5.26	□□□□□ -1.57
RUD3	YOR216C	NOC3	Q07896	663 aa	Predicted RBP	5.26	□□□□□ -1.57
RUD3	YOR216C	TUB2	P02557	457 aa	Known RBP	5.25	□□□□□ -1.57
RUD3	YOR216C	MTR4	P47047	1073 aa	Known RBP	5.25	□□□□□ -1.57
RUD3	YOR216C	FRT1	Q99332	602 aa		5.25	□□□□□ -1.57
RUD3	YOR216C	GRS1	P38088	690 aa	Known RBP	5.24	□□□□□ -1.57
RUD3	YOR216C	MDJ2	P42834	146 aa		5.24	□□□□□ -1.57
RUD3	YOR216C	YCS4	Q06156	1176 aa		5.24	□□□□□ -1.57
RUD3	YOR216C	PNS1	Q12412	539 aa		5.24	□□□□□ -1.57
RUD3	YOR216C	AIM26	P32858	118 aa		5.23	□□□□□ -1.57
RUD3	YOR216C	XKS1	P42826	600 aa		5.23	□□□□□ -1.57
RUD3	YOR216C	HRK1	Q08732	759 aa	Known RBP	5.23	□□□□□ -1.57
RUD3	YOR216C	MSH3	P25336	1018 aa		5.22	□□□□□ -1.57
RUD3	YOR216C	HSE1	P38753	452 aa		5.21	□□□□□ -1.58
RUD3	YOR216C	ERP5	P38819	212 aa		5.21	□□□□□ -1.58
RUD3	YOR216C	TAT2	P38967	592 aa		5.21	□□□□□ -1.58
RUD3	YOR216C	YJL045W	P47052	634 aa		5.21	□□□□□ -1.58
RUD3	YOR216C	SAM37	P50110	327 aa		5.21	□□□□□ -1.58
RUD3	YOR216C	NUT2	Q06213	157 aa		5.21	□□□□□ -1.58
RUD3	YOR216C	YPT53	P36019	220 aa		5.2	□□□□□ -1.58
RUD3	YOR216C	LAP2	Q10740	671 aa		5.2	□□□□□ -1.58
RUD3	YOR216C	YNR063W	P53749	607 aa		5.2	□□□□□ -1.58
RUD3	YOR216C	PEX13	P80667	386 aa		5.2	□□□□□ -1.58
RUD3	YOR216C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
RUD3	YOR216C	RLF2	Q12495	606 aa		5.2	□□□□□ -1.58
RUD3	YOR216C	QNS1	P38795	714 aa	Known RBP	5.19	□□□□□ -1.58
RUD3	YOR216C	RSC58	Q07979	502 aa		5.19	□□□□□ -1.58
RUD3	YOR216C	UGA4	P32837	571 aa		5.18	□□□□□ -1.58
RUD3	YOR216C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
RUD3	YOR216C	VMA4	P22203	233 aa	Known RBP	5.17	□□□□□ -1.58
RUD3	YOR216C	CIC1	P38779	376 aa	Known RBP	5.17	□□□□□ -1.58
RUD3	YOR216C	GCN5	Q03330	439 aa		5.17	□□□□□ -1.58
RUD3	YOR216C	SGD1	Q06132	899 aa		5.17	□□□□□ -1.58
RUD3	YOR216C	PUS9	Q12069	462 aa		5.17	□□□□□ -1.58
RUD3	YOR216C	YBL113C	Q7M4S9	792 aa		5.17	□□□□□ -1.58
RUD3	YOR216C	SPS1	P08458	490 aa		5.16	□□□□□ -1.58
RUD3	YOR216C	YSC84	P32793	468 aa		5.16	□□□□□ -1.58
RUD3	YOR216C	DOM34	P33309	386 aa		5.16	□□□□□ -1.58
RUD3	YOR216C	LAM1	P38851	1228 aa		5.16	□□□□□ -1.58
RUD3	YOR216C	MEF2	P39677	819 aa		5.16	□□□□□ -1.58
RUD3	YOR216C	PRP40	P33203	583 aa	Known RBP	5.15	□□□□□ -1.58
RUD3	YOR216C	TRM2	P33753	639 aa		5.15	□□□□□ -1.58
RUD3	YOR216C	ATG14	P38270	344 aa		5.15	□□□□□ -1.58
RUD3	YOR216C	RCL1	Q08096	367 aa	Predicted RBP	5.15	□□□□□ -1.58
RUD3	YOR216C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	RIP-Chip
RUD3	YOR216C	RSM26	P47141	266 aa		5.14	□□□□□ -1.59
RUD3	YOR216C	HNT2	P49775	206 aa		5.14	□□□□□ -1.59
RUD3	YOR216C	SPT20	P50875	604 aa		5.14	□□□□□ -1.59
RUD3	YOR216C	CDC3	P32457	520 aa	Known RBP	5.13	□□□□□ -1.59
RUD3	YOR216C	RDH54	P38086	958 aa		5.13	□□□□□ -1.59
RUD3	YOR216C	PEX28	P38848	579 aa		5.13	□□□□□ -1.59
RUD3	YOR216C	ULP1	Q02724	621 aa		5.13	□□□□□ -1.59
RUD3	YOR216C	RKM2	Q03942	479 aa		5.13	□□□□□ -1.59
RUD3	YOR216C	NBA1	Q08229	501 aa	Known RBP	5.13	□□□□□ -1.59
RUD3	YOR216C	VPS53	P47061	822 aa		5.13	□□□□□ -1.59
RUD3	YOR216C	SLI1	P53304	468 aa		5.13	□□□□□ -1.59
RUD3	YOR216C	DUS4	Q06063	367 aa		5.13	□□□□□ -1.59
RUD3	YOR216C	HEM13	P11353	328 aa	Known RBP	5.12	□□□□□ -1.59
RUD3	YOR216C	SQT1	P35184	431 aa		5.12	□□□□□ -1.59
RUD3	YOR216C	ADD66	P36040	267 aa		5.12	□□□□□ -1.59
RUD3	YOR216C	BAP2	P38084	609 aa		5.12	□□□□□ -1.59
RUD3	YOR216C	DAL4	Q04895	635 aa		5.12	□□□□□ -1.59
RUD3	YOR216C	YOR352W	Q08816	343 aa		5.12	□□□□□ -1.59
RUD3	YOR216C	SSA1	P10591	642 aa	Known RBP	5.11	□□□□□ -1.59
RUD3	YOR216C	COQ4	O13525	335 aa		5.1	□□□□□ -1.59
RUD3	YOR216C	CYC1	P00044	109 aa	Predicted RBP	5.1	□□□□□ -1.59
RUD3	YOR216C	KAR2	P16474	682 aa	Known RBP	5.1	□□□□□ -1.59
RUD3	YOR216C	KIP1	P28742	1111 aa		5.1	□□□□□ -1.59
RUD3	YOR216C	AFG2	P32794	780 aa		5.1	□□□□□ -1.59
RUD3	YOR216C	MSE1	P48525	536 aa		5.1	□□□□□ -1.59
RUD3	YOR216C	YGL140C	P53120	1219 aa		5.1	□□□□□ -1.59
RUD3	YOR216C	HAT1	Q12341	374 aa		5.1	□□□□□ -1.59
RUD3	YOR216C	PHO4	P07270	312 aa	Known RBP	5.09	□□□□□ -1.59
RUD3	YOR216C	STE11	P23561	717 aa		5.09	□□□□□ -1.59
RUD3	YOR216C	GPB2	P39717	880 aa		5.09	□□□□□ -1.59
RUD3	YOR216C	SEC26	P41810	973 aa	Known RBP	5.09	□□□□□ -1.59
RUD3	YOR216C	PLB2	Q03674	706 aa		5.09	□□□□□ -1.59
RUD3	YOR216C	ROT1	Q03691	256 aa		5.09	□□□□□ -1.59
RUD3	YOR216C	TOS4	Q06266	489 aa		5.09	□□□□□ -1.59
RUD3	YOR216C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
RUD3	YOR216C	VPS35	P34110	944 aa		5.08	□□□□□ -1.6
RUD3	YOR216C	SPO21	Q12411	609 aa		5.08	□□□□□ -1.6
RUD3	YOR216C	CCZ1	P38273	704 aa		5.07	□□□□□ -1.6
RUD3	YOR216C	TNA1	P53322	534 aa		5.07	□□□□□ -1.6
RUD3	YOR216C	HOS3	Q02959	697 aa	Known RBP	5.07	□□□□□ -1.6
RUD3	YOR216C	EST2	Q06163	884 aa		5.07	□□□□□ -1.6
RUD3	YOR216C	SNF5	P18480	905 aa		5.06	□□□□□ -1.6
RUD3	YOR216C	GCD6	P32501	712 aa	Known RBP	5.06	□□□□□ -1.6
RUD3	YOR216C	URN1	Q06525	465 aa	Known RBP	5.06	□□□□□ -1.6
RUD3	YOR216C	HCM1	P25364	564 aa		5.05	□□□□□ -1.6
RUD3	YOR216C	CDC20	P26309	610 aa		5.05	□□□□□ -1.6
RUD3	YOR216C	PMI40	P29952	429 aa	Known RBP	5.05	□□□□□ -1.6
RUD3	YOR216C	PIK1	P39104	1066 aa		5.05	□□□□□ -1.6
RUD3	YOR216C	MNN10	P50108	393 aa	Known RBP	5.05	□□□□□ -1.6
RUD3	YOR216C	CTF4	Q01454	927 aa		5.05	□□□□□ -1.6
RUD3	YOR216C	YPL109C	Q02981	657 aa		5.05	□□□□□ -1.6
RUD3	YOR216C	ADI1	Q03677	179 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms