RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W KXD1P53158 218 aa3.76□□□□□ -1.81
MSH2YOL090W MCD1Q12158 566 aa3.76□□□□□ -1.81
MSH2YOL090W SKI3P17883 1432 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W TAF13P11747 167 aa3.75□□□□□ -1.81
MSH2YOL090W SST2P11972 698 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W YEF3P16521 1044 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W SEA4P38164 1038 aa3.75□□□□□ -1.81
MSH2YOL090W EXO84P38261 753 aa3.75□□□□□ -1.81
MSH2YOL090W CIC1P38779 376 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W PEA2P40091 420 aa3.75□□□□□ -1.81
MSH2YOL090W YFL034WP43564 1073 aa3.75□□□□□ -1.81
MSH2YOL090W UBX4P54730 416 aa3.75□□□□□ -1.81
MSH2YOL090W ISU1Q03020 165 aa3.75□□□□□ -1.81
MSH2YOL090W THI73Q07904 523 aa3.75□□□□□ -1.81
MSH2YOL090W FMP25Q08023 583 aa3.75□□□□□ -1.81
MSH2YOL090W INP54Q08227 384 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W REC8Q12188 680 aa3.75□□□□□ -1.81
MSH2YOL090W TOP2P06786 1428 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W RPS31P05759 152 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W APA1P16550 321 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W OPI1P21957 404 aa3.75□□□□□ -1.81
MSH2YOL090W CHL1P22516 861 aaPredicted RBP3.75□□□□□ -1.81
MSH2YOL090W EUG1P32474 517 aa3.75□□□□□ -1.81
MSH2YOL090W MKK2P32491 506 aa3.75□□□□□ -1.81
MSH2YOL090W YAP1801P38856 637 aa3.75□□□□□ -1.81
MSH2YOL090W CWH41P53008 833 aa3.75□□□□□ -1.81
MSH2YOL090W YPL109CQ02981 657 aa3.75□□□□□ -1.81
MSH2YOL090W TY1B-JR2P47100 1755 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W TY1B-ER2Q03619 1755 aa3.75□□□□□ -1.81
MSH2YOL090W TY1B-MR1Q04214 1755 aa3.75□□□□□ -1.81
MSH2YOL090W TY1B-MR2Q04670 1755 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W TY1B-LR1Q12088 1755 aaKnown RBP3.75□□□□□ -1.81
MSH2YOL090W TY1B-NL1Q12112 1755 aa3.75□□□□□ -1.81
MSH2YOL090W TY1B-GR1Q12141 1755 aa3.75□□□□□ -1.81
MSH2YOL090W TY1B-BLQ12490 1755 aa3.75□□□□□ -1.81
MSH2YOL090W FOB1O13329 566 aa3.74□□□□□ -1.81
MSH2YOL090W STE6P12866 1290 aa3.74□□□□□ -1.81
MSH2YOL090W MEF1P25039 761 aa3.74□□□□□ -1.81
MSH2YOL090W MCM5P29496 775 aaKnown RBP3.74□□□□□ -1.81
MSH2YOL090W PLC1P32383 869 aa3.74□□□□□ -1.81
MSH2YOL090W SFP1P32432 683 aa3.74□□□□□ -1.81
MSH2YOL090W PRP40P33203 583 aaKnown RBP3.74□□□□□ -1.81
MSH2YOL090W YBL086CP38177 466 aa3.74□□□□□ -1.81
MSH2YOL090W GNP1P48813 663 aa3.74□□□□□ -1.81
MSH2YOL090W SPC105P53148 917 aa3.74□□□□□ -1.81
MSH2YOL090W PSK2Q08217 1101 aa3.74□□□□□ -1.81
MSH2YOL090W MMS22Q06164 1454 aa3.74□□□□□ -1.81
MSH2YOL090W HSP60P19882 572 aaKnown RBP3.74□□□□□ -1.81
MSH2YOL090W MRPL33P20084 86 aa3.74□□□□□ -1.81
MSH2YOL090W BLI1P35727 113 aa3.74□□□□□ -1.81
MSH2YOL090W HLJ1P48353 224 aa3.74□□□□□ -1.81
MSH2YOL090W YNL193WP53870 558 aa3.74□□□□□ -1.81
MSH2YOL090W MEH1Q02205 184 aa3.74□□□□□ -1.81
MSH2YOL090W UME1Q03010 460 aa3.74□□□□□ -1.81
MSH2YOL090W UGO1Q03327 502 aa3.74□□□□□ -1.81
MSH2YOL090W YLR001CQ07895 862 aa3.74□□□□□ -1.81
MSH2YOL090W FBP26P32604 452 aa3.73□□□□□ -1.81
MSH2YOL090W GGA2P38817 585 aaKnown RBP3.73□□□□□ -1.81
MSH2YOL090W BNA1P47096 177 aa3.73□□□□□ -1.81
MSH2YOL090W PIP2P52960 996 aa3.73□□□□□ -1.81
MSH2YOL090W OSH2Q12451 1283 aa3.73□□□□□ -1.81
MSH2YOL090W SNT2P53127 1403 aa3.73□□□□□ -1.81
MSH2YOL090W PDR15Q04182 1529 aaKnown RBP3.73□□□□□ -1.81
MSH2YOL090W GAL1P04385 528 aa3.73□□□□□ -1.81
MSH2YOL090W SHM1P37292 490 aaPredicted RBP3.73□□□□□ -1.81
MSH2YOL090W PMT3P47190 753 aa3.73□□□□□ -1.81
MSH2YOL090W PEX14P53112 341 aa3.73□□□□□ -1.81
MSH2YOL090W SPO75Q07798 868 aa3.73□□□□□ -1.81
MSH2YOL090W RTT10Q08924 1013 aa3.73□□□□□ -1.81
MSH2YOL090W YOL087CQ99247 1116 aa3.73□□□□□ -1.81
MSH2YOL090W TRM732Q03496 1420 aa3.73□□□□□ -1.81
MSH2YOL090W HSC82P15108 705 aaKnown RBP3.73□□□□□ -1.81
MSH2YOL090W SPT16P32558 1035 aaKnown RBP3.73□□□□□ -1.81
MSH2YOL090W AMN1P38285 549 aaPredicted RBP3.73□□□□□ -1.81
MSH2YOL090W RRP8P38961 392 aaKnown RBP3.73□□□□□ -1.81
MSH2YOL090W SEC26P41810 973 aaKnown RBP3.73□□□□□ -1.81
MSH2YOL090W HSV2P50079 448 aaPredicted RBP3.73□□□□□ -1.81
MSH2YOL090W MET14Q02196 202 aa3.73□□□□□ -1.81
MSH2YOL090W MET32Q12041 191 aa3.73□□□□□ -1.81
MSH2YOL090W BMT6Q12291 365 aa3.73□□□□□ -1.81
MSH2YOL090W TY1A-DR3Q12441 440 aa3.73□□□□□ -1.81
MSH2YOL090W VPS5Q92331 675 aa3.73□□□□□ -1.81
MSH2YOL090W HAP1P0CE41 1502 aa3.72□□□□□ -1.81
MSH2YOL090W NUP159P40477 1460 aa3.72□□□□□ -1.81
MSH2YOL090W SBP1P10080 294 aaKnown RBP3.72□□□□□ -1.81
MSH2YOL090W TFC4P33339 1025 aa3.72□□□□□ -1.81
MSH2YOL090W VBA5P36172 582 aa3.72□□□□□ -1.81
MSH2YOL090W RGD2P43556 714 aa3.72□□□□□ -1.81
MSH2YOL090W MPP10P47083 593 aaKnown RBP3.72□□□□□ -1.81
MSH2YOL090W ULP1Q02724 621 aa3.72□□□□□ -1.81
MSH2YOL090W YCS4Q06156 1176 aa3.72□□□□□ -1.81
MSH2YOL090W EAF1Q06337 982 aa3.72□□□□□ -1.81
MSH2YOL090W BUD3P25558 1636 aa3.72□□□□□ -1.81
MSH2YOL090W NUP145P49687 1317 aa3.72□□□□□ -1.81
MSH2YOL090W COBP00163 385 aa3.72□□□□□ -1.81
MSH2YOL090W ABD1P32783 436 aaPredicted RBP3.72□□□□□ -1.81
MSH2YOL090W IRR1P40541 1150 aa3.72□□□□□ -1.81
MSH2YOL090W CTR9P89105 1077 aa3.72□□□□□ -1.81
MSH2YOL090W AGP1P25376 633 aa3.71□□□□□ -1.82
MSH2YOL090W PEX6P33760 1030 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms