RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C HRK1Q08732 759 aaKnown RBP4.14□□□□□ -1.75
VTI1YMR197C YDL177CQ12257 170 aa4.14□□□□□ -1.75
VTI1YMR197C PHO4P07270 312 aaKnown RBP4.13□□□□□ -1.75
VTI1YMR197C SAM35P14693 329 aa4.13□□□□□ -1.75
VTI1YMR197C PRP6P19735 899 aaPredicted RBP4.13□□□□□ -1.75
VTI1YMR197C VMA4P22203 233 aaKnown RBP4.13□□□□□ -1.75
VTI1YMR197C GCD6P32501 712 aaKnown RBP4.13□□□□□ -1.75
VTI1YMR197C SQT1P35184 431 aa4.13□□□□□ -1.75
VTI1YMR197C AIM3P38266 947 aaKnown RBP4.13□□□□□ -1.75
VTI1YMR197C ETP1P38748 585 aaKnown RBP4.13□□□□□ -1.75
VTI1YMR197C TAF1P46677 1066 aa4.13□□□□□ -1.75
VTI1YMR197C MRPL22P53881 309 aa4.13□□□□□ -1.75
VTI1YMR197C ULP1Q02724 621 aa4.13□□□□□ -1.75
VTI1YMR197C DAL4Q04895 635 aa4.13□□□□□ -1.75
VTI1YMR197C RSA3Q05942 220 aaKnown RBP4.13□□□□□ -1.75
VTI1YMR197C LAP2Q10740 671 aa4.13□□□□□ -1.75
VTI1YMR197C KAR2P16474 682 aaKnown RBP4.12□□□□□ -1.75
VTI1YMR197C VPS35P34110 944 aa4.12□□□□□ -1.75
VTI1YMR197C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
VTI1YMR197C MDL2P33311 773 aa4.11□□□□□ -1.75
VTI1YMR197C GIP4P39732 760 aa4.11□□□□□ -1.75
VTI1YMR197C DAK2P43550 591 aa4.11□□□□□ -1.75
VTI1YMR197C YJL045WP47052 634 aa4.11□□□□□ -1.75
VTI1YMR197C MET4P32389 672 aa4.1□□□□□ -1.75
VTI1YMR197C AIM26P32858 118 aa4.1□□□□□ -1.75
VTI1YMR197C SSF1P38789 453 aaPredicted RBP4.1□□□□□ -1.75
VTI1YMR197C PEX28P38848 579 aa4.1□□□□□ -1.75
VTI1YMR197C FOL2P51601 243 aaKnown RBP4.1□□□□□ -1.75
VTI1YMR197C TOS4Q06266 489 aa4.1□□□□□ -1.75
VTI1YMR197C FLR1P38124 548 aa4.09□□□□□ -1.75
VTI1YMR197C QNS1P38795 714 aaKnown RBP4.09□□□□□ -1.75
VTI1YMR197C RIM8P53179 542 aa4.09□□□□□ -1.75
VTI1YMR197C TAF7Q05021 590 aa4.09□□□□□ -1.75
VTI1YMR197C OXR1Q08952 273 aa4.09□□□□□ -1.75
VTI1YMR197C SRO9P25567 434 aaKnown RBP4.08□□□□□ -1.76
VTI1YMR197C ADD66P36040 267 aa4.08□□□□□ -1.76
VTI1YMR197C RDH54P38086 958 aa4.08□□□□□ -1.76
VTI1YMR197C PPX1P38698 397 aa4.08□□□□□ -1.76
VTI1YMR197C YGL140CP53120 1219 aa4.08□□□□□ -1.76
VTI1YMR197C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.08□□□□□ -1.76not detected
VTI1YMR197C WHI5Q12416 295 aa4.08□□□□□ -1.76
VTI1YMR197C HEM13P11353 328 aaKnown RBP4.07□□□□□ -1.76
VTI1YMR197C YSC84P32793 468 aa4.07□□□□□ -1.76
VTI1YMR197C STM1P39015 273 aaKnown RBP4.07□□□□□ -1.76
VTI1YMR197C THI12P42883 340 aa4.07□□□□□ -1.76
VTI1YMR197C THI5P43534 340 aa4.07□□□□□ -1.76
VTI1YMR197C VPS53P47061 822 aa4.07□□□□□ -1.76
VTI1YMR197C THI11P47183 340 aa4.07□□□□□ -1.76
VTI1YMR197C SNO2P53823 222 aa4.07□□□□□ -1.76
VTI1YMR197C ADI1Q03677 179 aa4.07□□□□□ -1.76
VTI1YMR197C RKM2Q03942 479 aa4.07□□□□□ -1.76
VTI1YMR197C THI13Q07748 340 aa4.07□□□□□ -1.76
VTI1YMR197C SOD2P00447 233 aa4.06□□□□□ -1.76
VTI1YMR197C RPS13P05756 151 aaKnown RBP4.06□□□□□ -1.76
VTI1YMR197C TOD6P34219 525 aa4.06□□□□□ -1.76
VTI1YMR197C FAA3P39002 694 aa4.06□□□□□ -1.76
VTI1YMR197C YPL109CQ02981 657 aa4.06□□□□□ -1.76
VTI1YMR197C MSC6Q08818 692 aaKnown RBP4.06□□□□□ -1.76
VTI1YMR197C YPL277CQ08989 487 aa4.06□□□□□ -1.76
VTI1YMR197C SEC23P15303 768 aaKnown RBP4.05□□□□□ -1.76
VTI1YMR197C EST2Q06163 884 aa4.05□□□□□ -1.76
VTI1YMR197C RSC58Q07979 502 aa4.05□□□□□ -1.76
VTI1YMR197C NBA1Q08229 501 aaKnown RBP4.05□□□□□ -1.76
VTI1YMR197C COQ4O13525 335 aa4.04□□□□□ -1.76
VTI1YMR197C DED1P06634 604 aaKnown RBP4.04□□□□□ -1.76
VTI1YMR197C SPS1P08458 490 aa4.04□□□□□ -1.76
VTI1YMR197C KIP1P28742 1111 aa4.04□□□□□ -1.76
VTI1YMR197C AFG2P32794 780 aa4.04□□□□□ -1.76
VTI1YMR197C RPT1P33299 467 aaKnown RBP4.04□□□□□ -1.76
VTI1YMR197C GPB2P39717 880 aa4.04□□□□□ -1.76
VTI1YMR197C HDA2Q06629 674 aa4.04□□□□□ -1.76
VTI1YMR197C RCL1Q08096 367 aaPredicted RBP4.04□□□□□ -1.76
VTI1YMR197C PIC2P40035 300 aa4.03□□□□□ -1.76
VTI1YMR197C PTC5Q12511 572 aa4.03□□□□□ -1.76
VTI1YMR197C HXK1P04806 485 aaKnown RBP4.02□□□□□ -1.77
VTI1YMR197C ALG3P38179 458 aa4.02□□□□□ -1.77
VTI1YMR197C CCZ1P38273 704 aa4.02□□□□□ -1.77
VTI1YMR197C HOS3Q02959 697 aaKnown RBP4.01□□□□□ -1.77
VTI1YMR197C YOR352WQ08816 343 aa4.01□□□□□ -1.77
VTI1YMR197C SEC20P28791 383 aa4□□□□□ -1.77
VTI1YMR197C IPL1P38991 367 aa4□□□□□ -1.77
VTI1YMR197C ENV11P53246 860 aa4□□□□□ -1.77
VTI1YMR197C TNA1P53322 534 aa4□□□□□ -1.77
VTI1YMR197C RSB1Q08417 382 aa4□□□□□ -1.77
VTI1YMR197C BAP2P38084 609 aa3.99□□□□□ -1.77
VTI1YMR197C SEC26P41810 973 aaKnown RBP3.99□□□□□ -1.77
VTI1YMR197C SPT20P50875 604 aa3.99□□□□□ -1.77
VTI1YMR197C RAT1Q02792 1006 aaKnown RBP3.99□□□□□ -1.77
VTI1YMR197C CLU1Q03690 1277 aaKnown RBP3.99□□□□□ -1.77
VTI1YMR197C YDR132CQ03900 495 aa3.99□□□□□ -1.77
VTI1YMR197C SGD1Q06132 899 aa3.99□□□□□ -1.77
VTI1YMR197C SPO21Q12411 609 aa3.99□□□□□ -1.77
VTI1YMR197C YLR358CO13565 187 aa3.98□□□□□ -1.77
VTI1YMR197C CYC1P00044 109 aaPredicted RBP3.98□□□□□ -1.77
VTI1YMR197C TAF13P11747 167 aa3.98□□□□□ -1.77
VTI1YMR197C SNF5P18480 905 aa3.98□□□□□ -1.77
VTI1YMR197C PRE10P21242 288 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
VTI1YMR197C LAM1P38851 1228 aa3.98□□□□□ -1.77
VTI1YMR197C PIK1P39104 1066 aa3.98□□□□□ -1.77
VTI1YMR197C YGR122WP53272 402 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms