RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeast

Gene RNP1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNP1	YLL046C	YAR028W	P39548	234 aa		5.03	□□□□□ -1.6
RNP1	YLL046C	RVS167	P39743	482 aa	Known RBP	5.03	□□□□□ -1.6
RNP1	YLL046C	CDC55	Q00362	526 aa		5.03	□□□□□ -1.6
RNP1	YLL046C	SLI1	P53304	468 aa		5.02	□□□□□ -1.61
RNP1	YLL046C	YDR132C	Q03900	495 aa		5.02	□□□□□ -1.61
RNP1	YLL046C	ACF4	P47129	309 aa		5.01	□□□□□ -1.61
RNP1	YLL046C	ATG1	P53104	897 aa		5.01	□□□□□ -1.61
RNP1	YLL046C	URN1	Q06525	465 aa	Known RBP	5	□□□□□ -1.61
RNP1	YLL046C	SHU2	P38957	223 aa		4.99	□□□□□ -1.61
RNP1	YLL046C	MTR4	P47047	1073 aa	Known RBP	4.99	□□□□□ -1.61
RNP1	YLL046C	GCN5	Q03330	439 aa		4.99	□□□□□ -1.61
RNP1	YLL046C	RSA3	Q05942	220 aa	Known RBP	4.99	□□□□□ -1.61
RNP1	YLL046C	SGD1	Q06132	899 aa		4.99	□□□□□ -1.61
RNP1	YLL046C	SUB2	Q07478	446 aa	Known RBP	4.99	□□□□□ -1.61
RNP1	YLL046C	RAD53	P22216	821 aa		4.98	□□□□□ -1.61
RNP1	YLL046C	HCM1	P25364	564 aa		4.98	□□□□□ -1.61
RNP1	YLL046C	ENV11	P53246	860 aa		4.98	□□□□□ -1.61
RNP1	YLL046C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RNP1	YLL046C	HRK1	Q08732	759 aa	Known RBP	4.98	□□□□□ -1.61
RNP1	YLL046C	MEF2	P39677	819 aa		4.97	□□□□□ -1.61
RNP1	YLL046C	YJL045W	P47052	634 aa		4.97	□□□□□ -1.61
RNP1	YLL046C	SUN4	P53616	420 aa		4.97	□□□□□ -1.61
RNP1	YLL046C	CTF4	Q01454	927 aa		4.97	□□□□□ -1.61
RNP1	YLL046C	UTP5	Q04177	643 aa	Known RBP	4.97	□□□□□ -1.61
RNP1	YLL046C	HSE1	P38753	452 aa		4.96	□□□□□ -1.62
RNP1	YLL046C	LAM1	P38851	1228 aa		4.96	□□□□□ -1.62
RNP1	YLL046C	XKS1	P42826	600 aa		4.96	□□□□□ -1.62
RNP1	YLL046C	YNR063W	P53749	607 aa		4.96	□□□□□ -1.62
RNP1	YLL046C	LAP2	Q10740	671 aa		4.96	□□□□□ -1.62
RNP1	YLL046C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
RNP1	YLL046C	SRO9	P25567	434 aa	Known RBP	4.95	□□□□□ -1.62
RNP1	YLL046C	AIM21	P40563	679 aa		4.95	□□□□□ -1.62
RNP1	YLL046C	NOG1	Q02892	647 aa	Known RBP	4.95	□□□□□ -1.62
RNP1	YLL046C	SPS1	P08458	490 aa		4.94	□□□□□ -1.62
RNP1	YLL046C	NOC3	Q07896	663 aa	Predicted RBP	4.94	□□□□□ -1.62
RNP1	YLL046C	RSC58	Q07979	502 aa		4.94	□□□□□ -1.62
RNP1	YLL046C	MSH3	P25336	1018 aa		4.93	□□□□□ -1.62
RNP1	YLL046C	PEX13	P80667	386 aa		4.93	□□□□□ -1.62
RNP1	YLL046C	GPI13	Q07830	1017 aa		4.93	□□□□□ -1.62
RNP1	YLL046C	NBA1	Q08229	501 aa	Known RBP	4.93	□□□□□ -1.62
RNP1	YLL046C	ATG14	P38270	344 aa		4.92	□□□□□ -1.62
RNP1	YLL046C	QNS1	P38795	714 aa	Known RBP	4.92	□□□□□ -1.62
RNP1	YLL046C	RPL34A	P87262	121 aa	Predicted RBP	4.92	□□□□□ -1.62
RNP1	YLL046C	TRL1	P09880	827 aa	Known RBP	4.91	□□□□□ -1.62
RNP1	YLL046C	PMI40	P29952	429 aa	Known RBP	4.91	□□□□□ -1.62
RNP1	YLL046C	YSC84	P32793	468 aa		4.91	□□□□□ -1.62
RNP1	YLL046C	SNM1	P40993	198 aa		4.91	□□□□□ -1.62
RNP1	YLL046C	YCS4	Q06156	1176 aa		4.91	□□□□□ -1.62
RNP1	YLL046C	RCL1	Q08096	367 aa	Predicted RBP	4.91	□□□□□ -1.62
RNP1	YLL046C	GRS1	P38088	690 aa	Known RBP	4.9	□□□□□ -1.63
RNP1	YLL046C	HNT2	P49775	206 aa		4.9	□□□□□ -1.63
RNP1	YLL046C	ROT1	Q03691	256 aa		4.9	□□□□□ -1.63
RNP1	YLL046C	NTO1	Q12311	748 aa		4.9	□□□□□ -1.63
RNP1	YLL046C	CYC1	P00044	109 aa	Predicted RBP	4.89	□□□□□ -1.63
RNP1	YLL046C	MCM6	P53091	1017 aa	Known RBP	4.89	□□□□□ -1.63
RNP1	YLL046C	VMA4	P22203	233 aa	Known RBP	4.88	□□□□□ -1.63
RNP1	YLL046C	DOM34	P33309	386 aa		4.88	□□□□□ -1.63
RNP1	YLL046C	MNN10	P50108	393 aa	Known RBP	4.88	□□□□□ -1.63
RNP1	YLL046C	SAM37	P50110	327 aa		4.88	□□□□□ -1.63
RNP1	YLL046C	FRT1	Q99332	602 aa		4.88	□□□□□ -1.63
RNP1	YLL046C	STE11	P23561	717 aa		4.87	□□□□□ -1.63
RNP1	YLL046C	UGA4	P32837	571 aa		4.87	□□□□□ -1.63
RNP1	YLL046C	PLB2	Q03674	706 aa		4.87	□□□□□ -1.63
RNP1	YLL046C	MDJ2	P42834	146 aa		4.86	□□□□□ -1.63
RNP1	YLL046C	RSM26	P47141	266 aa		4.86	□□□□□ -1.63
RNP1	YLL046C	DUS4	Q06063	367 aa		4.86	□□□□□ -1.63
RNP1	YLL046C	TMA10	Q06177	86 aa		4.86	□□□□□ -1.63
RNP1	YLL046C	COQ4	O13525	335 aa		4.85	□□□□□ -1.63
RNP1	YLL046C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RNP1	YLL046C	CIC1	P38779	376 aa	Known RBP	4.85	□□□□□ -1.63
RNP1	YLL046C	SEC26	P41810	973 aa	Known RBP	4.85	□□□□□ -1.63
RNP1	YLL046C	VPS53	P47061	822 aa		4.85	□□□□□ -1.63
RNP1	YLL046C	NUT2	Q06213	157 aa		4.85	□□□□□ -1.63
RNP1	YLL046C	SPO21	Q12411	609 aa		4.85	□□□□□ -1.63
RNP1	YLL046C	CCZ1	P38273	704 aa		4.84	□□□□□ -1.63
RNP1	YLL046C	ERP5	P38819	212 aa		4.84	□□□□□ -1.63
RNP1	YLL046C	CHS7	P38843	316 aa		4.84	□□□□□ -1.63
RNP1	YLL046C	KIP1	P28742	1111 aa		4.83	□□□□□ -1.64
RNP1	YLL046C	PRP40	P33203	583 aa	Known RBP	4.83	□□□□□ -1.64
RNP1	YLL046C	SQT1	P35184	431 aa		4.83	□□□□□ -1.64
RNP1	YLL046C	ADD66	P36040	267 aa		4.83	□□□□□ -1.64
RNP1	YLL046C	PEX28	P38848	579 aa		4.83	□□□□□ -1.64
RNP1	YLL046C	GPB2	P39717	880 aa		4.83	□□□□□ -1.64
RNP1	YLL046C	RKM2	Q03942	479 aa		4.83	□□□□□ -1.64
RNP1	YLL046C	RXT3	Q07458	294 aa		4.83	□□□□□ -1.64
RNP1	YLL046C	RSB1	Q08417	382 aa		4.83	□□□□□ -1.64
RNP1	YLL046C	LST4	P34239	828 aa		4.82	□□□□□ -1.64
RNP1	YLL046C	ULP1	Q02724	621 aa		4.82	□□□□□ -1.64
RNP1	YLL046C	BAP2	P38084	609 aa		4.81	□□□□□ -1.64
RNP1	YLL046C	RDH54	P38086	958 aa		4.81	□□□□□ -1.64
RNP1	YLL046C	PHO23	P50947	330 aa		4.81	□□□□□ -1.64
RNP1	YLL046C	TNA1	P53322	534 aa		4.81	□□□□□ -1.64
RNP1	YLL046C	HOS3	Q02959	697 aa	Known RBP	4.81	□□□□□ -1.64
RNP1	YLL046C	ACK1	Q07622	623 aa	Predicted RBP	4.81	□□□□□ -1.64
RNP1	YLL046C	GAL10	P04397	699 aa		4.8	□□□□□ -1.64
RNP1	YLL046C	CDC20	P26309	610 aa		4.8	□□□□□ -1.64
RNP1	YLL046C	YBL113C	Q7M4S9	792 aa		4.8	□□□□□ -1.64
RNP1	YLL046C	HEM13	P11353	328 aa	Known RBP	4.79	□□□□□ -1.64
RNP1	YLL046C	CMP2	P14747	604 aa		4.79	□□□□□ -1.64
RNP1	YLL046C	AFG2	P32794	780 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms