RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C RAD5P32849 1169 aaPredicted RBP2.62□□□□□ -1.99
VPS13YLL040C INP2Q03824 705 aa2.62□□□□□ -1.99
VPS13YLL040C FLO1P32768 1537 aa2.62□□□□□ -1.99
VPS13YLL040C ADH4P10127 382 aa2.62□□□□□ -1.99
VPS13YLL040C SMC2P38989 1170 aaKnown RBP2.62□□□□□ -1.99
VPS13YLL040C IES5P40060 125 aa2.62□□□□□ -1.99
VPS13YLL040C CTH1P47976 325 aa2.62□□□□□ -1.99
VPS13YLL040C MCM16Q12262 181 aa2.62□□□□□ -1.99
VPS13YLL040C HSP82P02829 709 aaKnown RBP2.62□□□□□ -1.99
VPS13YLL040C SEC18P18759 758 aaKnown RBP2.62□□□□□ -1.99
VPS13YLL040C RPN10P38886 268 aaKnown RBP2.62□□□□□ -1.99
VPS13YLL040C SAK1P38990 1142 aa2.62□□□□□ -1.99
VPS13YLL040C COS5P47187 383 aa2.62□□□□□ -1.99
VPS13YLL040C RCF2P53721 224 aa2.62□□□□□ -1.99
VPS13YLL040C UTP5Q04177 643 aaKnown RBP2.62□□□□□ -1.99
VPS13YLL040C OMS1Q06668 471 aa2.62□□□□□ -1.99
VPS13YLL040C HXK1P04806 485 aaKnown RBP2.62□□□□□ -1.99
VPS13YLL040C ADE3P07245 946 aaKnown RBP2.62□□□□□ -1.99
VPS13YLL040C SNF3P10870 884 aa2.62□□□□□ -1.99
VPS13YLL040C PSY4P38193 441 aa2.62□□□□□ -1.99
VPS13YLL040C UTP18P40362 594 aaPredicted RBP2.62□□□□□ -1.99
VPS13YLL040C IRC8P47046 822 aa2.62□□□□□ -1.99
VPS13YLL040C CDC8P00572 216 aa2.61□□□□□ -1.99
VPS13YLL040C MRP8P35719 219 aa2.61□□□□□ -1.99
VPS13YLL040C YJR079WP47126 109 aa2.61□□□□□ -1.99
VPS13YLL040C EST2Q06163 884 aa2.61□□□□□ -1.99
VPS13YLL040C MMR1Q06324 491 aa2.61□□□□□ -1.99
VPS13YLL040C SPT5P27692 1063 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C DEP1P31385 405 aa2.61□□□□□ -1.99
VPS13YLL040C RME1P32338 300 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C RFC5P38251 354 aa2.61□□□□□ -1.99
VPS13YLL040C HFM1P51979 1187 aa2.61□□□□□ -1.99
VPS13YLL040C HMO1Q03973 246 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C BLI1P35727 113 aa2.61□□□□□ -1.99
VPS13YLL040C YKR075CP36155 307 aa2.61□□□□□ -1.99
VPS13YLL040C APT1P49435 187 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C TSR1Q07381 788 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C BDF1P35817 686 aa2.61□□□□□ -1.99
VPS13YLL040C SHQ1P40486 507 aaPredicted RBP2.61□□□□□ -1.99
VPS13YLL040C AIP1P46680 615 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C OPY2Q06810 360 aa2.61□□□□□ -1.99
VPS13YLL040C NOT5Q12514 560 aaPredicted RBP2.61□□□□□ -1.99
VPS13YLL040C ECM1P39715 212 aa2.61□□□□□ -1.99
VPS13YLL040C ICP55P40051 511 aa2.61□□□□□ -1.99
VPS13YLL040C CAF130P53280 1122 aaPredicted RBP2.61□□□□□ -1.99
VPS13YLL040C SGD1Q06132 899 aa2.61□□□□□ -1.99
VPS13YLL040C YLR413WQ06689 675 aa2.61□□□□□ -1.99
VPS13YLL040C MAM3Q12296 706 aa2.61□□□□□ -1.99
VPS13YLL040C PFK2P16862 959 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
VPS13YLL040C SRP40P32583 406 aaPredicted RBP2.61□□□□□ -1.99
VPS13YLL040C UGA2P38067 497 aa2.61□□□□□ -1.99
VPS13YLL040C SHR3Q02774 210 aa2.61□□□□□ -1.99
VPS13YLL040C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
VPS13YLL040C YKL068W-AQ3E826 78 aa2.61□□□□□ -1.99
VPS13YLL040C YDJ1P25491 409 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C YKL133CP36066 463 aa2.61□□□□□ -1.99
VPS13YLL040C ASI1P54074 624 aa2.61□□□□□ -1.99
VPS13YLL040C TIM50Q02776 476 aa2.61□□□□□ -1.99
VPS13YLL040C PCL8Q08966 492 aa2.61□□□□□ -1.99
VPS13YLL040C PYC1P11154 1178 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C THR4P16120 514 aaKnown RBP2.61□□□□□ -1.99
VPS13YLL040C RER2P35196 286 aa2.61□□□□□ -1.99
VPS13YLL040C MIF2P35201 549 aa2.61□□□□□ -1.99
VPS13YLL040C BDP1P46678 594 aa2.61□□□□□ -1.99
VPS13YLL040C SRL4Q03085 281 aa2.61□□□□□ -1.99
VPS13YLL040C DSE3Q08729 430 aa2.61□□□□□ -1.99
VPS13YLL040C GET4Q12125 312 aa2.61□□□□□ -1.99
VPS13YLL040C TAF3Q12297 353 aa2.61□□□□□ -1.99
VPS13YLL040C PCK1P10963 549 aa2.6□□□□□ -1.99
VPS13YLL040C UBC6P33296 250 aaPredicted RBP2.6□□□□□ -1.99
VPS13YLL040C SHC1P39000 512 aa2.6□□□□□ -1.99
VPS13YLL040C YER130CP39959 443 aa2.6□□□□□ -1.99
VPS13YLL040C NDC80P40460 691 aa2.6□□□□□ -1.99
VPS13YLL040C UBP16Q02863 499 aa2.6□□□□□ -1.99
VPS13YLL040C GUD1Q07729 489 aa2.6□□□□□ -1.99
VPS13YLL040C MLH2Q07980 695 aa2.6□□□□□ -1.99
VPS13YLL040C DPH6Q12429 685 aa2.6□□□□□ -1.99
VPS13YLL040C MAK31P23059 88 aa2.6□□□□□ -1.99
VPS13YLL040C AFG2P32794 780 aa2.6□□□□□ -1.99
VPS13YLL040C SPC72P39723 622 aa2.6□□□□□ -1.99
VPS13YLL040C TIF4632P39936 914 aaKnown RBP2.6□□□□□ -1.99
VPS13YLL040C BNI4P53858 892 aa2.6□□□□□ -1.99
VPS13YLL040C YNL108CP53929 270 aa2.6□□□□□ -1.99
VPS13YLL040C STE20Q03497 939 aaKnown RBP2.6□□□□□ -1.99
VPS13YLL040C ATG23Q06671 453 aa2.6□□□□□ -1.99
VPS13YLL040C CDC60P26637 1090 aaKnown RBP2.6□□□□□ -1.99
VPS13YLL040C AIM20P40451 204 aa2.6□□□□□ -1.99
VPS13YLL040C VPS30Q02948 557 aa2.6□□□□□ -1.99
VPS13YLL040C MIP1P15801 1254 aa2.6□□□□□ -1.99
VPS13YLL040C GAL11P19659 1081 aa2.6□□□□□ -1.99
VPS13YLL040C BEM3P32873 1128 aa2.6□□□□□ -1.99
VPS13YLL040C DMA1P38823 416 aa2.6□□□□□ -1.99
VPS13YLL040C AIM21P40563 679 aa2.6□□□□□ -1.99
VPS13YLL040C BIR1P47134 954 aa2.6□□□□□ -1.99
VPS13YLL040C YMR187CQ03236 431 aa2.6□□□□□ -1.99
VPS13YLL040C MED1Q12321 566 aa2.6□□□□□ -1.99
VPS13YLL040C YLR278CQ05854 1341 aa2.6□□□□□ -1.99
VPS13YLL040C SNF1P06782 633 aaKnown RBP2.6□□□□□ -1.99
VPS13YLL040C VPS4P52917 437 aa2.6□□□□□ -1.99
VPS13YLL040C TFC6Q06339 672 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms