RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C NOG1Q02892 647 aaKnown RBP4.67□□□□□ -1.66
RPL40BYKR094C CLU1Q03690 1277 aaKnown RBP4.67□□□□□ -1.66
RPL40BYKR094C MSH3P25336 1018 aa4.66□□□□□ -1.66
RPL40BYKR094C YNR063WP53749 607 aa4.66□□□□□ -1.66
RPL40BYKR094C YCS4Q06156 1176 aa4.66□□□□□ -1.66
RPL40BYKR094C NUT2Q06213 157 aa4.66□□□□□ -1.66
RPL40BYKR094C HRK1Q08732 759 aaKnown RBP4.66□□□□□ -1.66
RPL40BYKR094C CTS1P29029 562 aa4.65□□□□□ -1.67
RPL40BYKR094C UGA4P32837 571 aa4.65□□□□□ -1.67
RPL40BYKR094C HSE1P38753 452 aa4.65□□□□□ -1.67
RPL40BYKR094C PEX13P80667 386 aa4.65□□□□□ -1.67
RPL40BYKR094C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
RPL40BYKR094C GIS1Q03833 894 aa4.65□□□□□ -1.67
RPL40BYKR094C RLF2Q12495 606 aa4.65□□□□□ -1.67
RPL40BYKR094C ABZ1P37254 787 aaPredicted RBP4.64□□□□□ -1.67
RPL40BYKR094C SHM2P37291 469 aaKnown RBP4.64□□□□□ -1.67
RPL40BYKR094C SAM37P50110 327 aa4.64□□□□□ -1.67
RPL40BYKR094C LAP2Q10740 671 aa4.64□□□□□ -1.67
RPL40BYKR094C YBL113CQ7M4S9 792 aa4.64□□□□□ -1.67
RPL40BYKR094C YLR358CO13565 187 aa4.63□□□□□ -1.67
RPL40BYKR094C SRO9P25567 434 aaKnown RBP4.63□□□□□ -1.67
RPL40BYKR094C GSF2Q04697 403 aaKnown RBP4.63□□□□□ -1.67
RPL40BYKR094C PRE10P21242 288 aaKnown RBP RIP-Chip data4.62□□□□□ -1.67not detected
RPL40BYKR094C ATG14P38270 344 aa4.62□□□□□ -1.67
RPL40BYKR094C CIC1P38779 376 aaKnown RBP4.62□□□□□ -1.67
RPL40BYKR094C QNS1P38795 714 aaKnown RBP4.62□□□□□ -1.67
RPL40BYKR094C RSM26P47141 266 aa4.62□□□□□ -1.67
RPL40BYKR094C RSC58Q07979 502 aa4.62□□□□□ -1.67
RPL40BYKR094C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
RPL40BYKR094C SPS1P08458 490 aa4.61□□□□□ -1.67
RPL40BYKR094C YDR132CQ03900 495 aa4.61□□□□□ -1.67
RPL40BYKR094C TUB2P02557 457 aaKnown RBP4.6□□□□□ -1.67
RPL40BYKR094C VMA4P22203 233 aaKnown RBP4.6□□□□□ -1.67
RPL40BYKR094C YSC84P32793 468 aa4.6□□□□□ -1.67
RPL40BYKR094C PRP40P33203 583 aaKnown RBP4.6□□□□□ -1.67
RPL40BYKR094C SPT20P50875 604 aa4.6□□□□□ -1.67
RPL40BYKR094C RCL1Q08096 367 aaPredicted RBP4.6□□□□□ -1.67
RPL40BYKR094C CDC3P32457 520 aaKnown RBP4.59□□□□□ -1.67
RPL40BYKR094C SQT1P35184 431 aa4.59□□□□□ -1.67
RPL40BYKR094C PEX28P38848 579 aa4.59□□□□□ -1.67
RPL40BYKR094C ULP1Q02724 621 aa4.59□□□□□ -1.67
RPL40BYKR094C NBA1Q08229 501 aaKnown RBP4.59□□□□□ -1.67
RPL40BYKR094C SSA1P10591 642 aaKnown RBP4.58□□□□□ -1.68
RPL40BYKR094C DAL4Q04895 635 aa4.58□□□□□ -1.68
RPL40BYKR094C SGD1Q06132 899 aa4.58□□□□□ -1.68
RPL40BYKR094C YOR352WQ08816 343 aa4.58□□□□□ -1.68
RPL40BYKR094C HAT1Q12341 374 aa4.58□□□□□ -1.68
RPL40BYKR094C ADD66P36040 267 aa4.57□□□□□ -1.68
RPL40BYKR094C RDH54P38086 958 aa4.57□□□□□ -1.68
RPL40BYKR094C LAM1P38851 1228 aa4.57□□□□□ -1.68
RPL40BYKR094C TAT2P38967 592 aa4.57□□□□□ -1.68
RPL40BYKR094C MPT5P39016 859 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
RPL40BYKR094C GPB2P39717 880 aa4.57□□□□□ -1.68
RPL40BYKR094C VPS53P47061 822 aa4.57□□□□□ -1.68
RPL40BYKR094C GCN5Q03330 439 aa4.57□□□□□ -1.68
RPL40BYKR094C CYC1P00044 109 aaPredicted RBP4.56□□□□□ -1.68
RPL40BYKR094C HEM13P11353 328 aaKnown RBP4.56□□□□□ -1.68
RPL40BYKR094C MEF2P39677 819 aa4.56□□□□□ -1.68
RPL40BYKR094C RKM2Q03942 479 aa4.56□□□□□ -1.68
RPL40BYKR094C PNS1Q12412 539 aa4.56□□□□□ -1.68
RPL40BYKR094C COQ4O13525 335 aa4.55□□□□□ -1.68
RPL40BYKR094C KIP1P28742 1111 aa4.55□□□□□ -1.68
RPL40BYKR094C AFG2P32794 780 aa4.55□□□□□ -1.68
RPL40BYKR094C YGL140CP53120 1219 aa4.55□□□□□ -1.68
RPL40BYKR094C ENV11P53246 860 aa4.55□□□□□ -1.68
RPL40BYKR094C ROT1Q03691 256 aa4.55□□□□□ -1.68
RPL40BYKR094C TOS4Q06266 489 aa4.55□□□□□ -1.68
RPL40BYKR094C PHO4P07270 312 aaKnown RBP4.54□□□□□ -1.68
RPL40BYKR094C KAR2P16474 682 aaKnown RBP4.54□□□□□ -1.68
RPL40BYKR094C CCZ1P38273 704 aa4.54□□□□□ -1.68
RPL40BYKR094C SPO21Q12411 609 aa4.54□□□□□ -1.68
RPL40BYKR094C GCD6P32501 712 aaKnown RBP4.53□□□□□ -1.68
RPL40BYKR094C VPS35P34110 944 aa4.53□□□□□ -1.68
RPL40BYKR094C PLB2Q03674 706 aa4.53□□□□□ -1.68
RPL40BYKR094C TAD3Q9URQ3 322 aa4.53□□□□□ -1.68
RPL40BYKR094C BAP2P38084 609 aa4.52□□□□□ -1.69
RPL40BYKR094C YHL050CP38721 697 aa4.52□□□□□ -1.69
RPL40BYKR094C YHR219WP38900 624 aa4.52□□□□□ -1.69
RPL40BYKR094C SEC26P41810 973 aaKnown RBP4.52□□□□□ -1.69
RPL40BYKR094C EST2Q06163 884 aa4.52□□□□□ -1.69
RPL40BYKR094C DED1P06634 604 aaKnown RBP4.51□□□□□ -1.69
RPL40BYKR094C DAK2P43550 591 aa4.51□□□□□ -1.69
RPL40BYKR094C TNA1P53322 534 aa4.51□□□□□ -1.69
RPL40BYKR094C HOS3Q02959 697 aaKnown RBP4.51□□□□□ -1.69
RPL40BYKR094C DUS4Q06063 367 aa4.51□□□□□ -1.69
RPL40BYKR094C RSB1Q08417 382 aa4.51□□□□□ -1.69
RPL40BYKR094C PTC5Q12511 572 aa4.51□□□□□ -1.69
RPL40BYKR094C SEC23P15303 768 aaKnown RBP4.5□□□□□ -1.69
RPL40BYKR094C SNF5P18480 905 aa4.5□□□□□ -1.69
RPL40BYKR094C PUF4P25339 888 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
RPL40BYKR094C ALG3P38179 458 aa4.5□□□□□ -1.69
RPL40BYKR094C HNT2P49775 206 aa4.5□□□□□ -1.69
RPL40BYKR094C YPL109CQ02981 657 aa4.5□□□□□ -1.69
RPL40BYKR094C ADI1Q03677 179 aa4.5□□□□□ -1.69
RPL40BYKR094C PUS9Q12069 462 aa4.5□□□□□ -1.69
RPL40BYKR094C GAL10P04397 699 aa4.49□□□□□ -1.69
RPL40BYKR094C MET4P32389 672 aa4.49□□□□□ -1.69
RPL40BYKR094C TRM2P33753 639 aa4.49□□□□□ -1.69
RPL40BYKR094C FAA3P39002 694 aa4.49□□□□□ -1.69
RPL40BYKR094C PIK1P39104 1066 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms