RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C QDR1P40475 563 aa4.38□□□□□ -1.71
PDX1YGR193C AIM21P40563 679 aa4.38□□□□□ -1.71
PDX1YGR193C UTP22P53254 1237 aaPredicted RBP4.38□□□□□ -1.71
PDX1YGR193C ORC3P54790 616 aa4.38□□□□□ -1.71
PDX1YGR193C TY1A-GR1Q12085 440 aa4.38□□□□□ -1.71
PDX1YGR193C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.38□□□□□ -1.71
PDX1YGR193C TY1A-OLQ92392 440 aaKnown RBP4.38□□□□□ -1.71
PDX1YGR193C UFD2P54860 961 aa4.37□□□□□ -1.71
PDX1YGR193C MSH6Q03834 1242 aa4.37□□□□□ -1.71
PDX1YGR193C SUB2Q07478 446 aaKnown RBP4.37□□□□□ -1.71
PDX1YGR193C TRE1Q08919 783 aa4.37□□□□□ -1.71
PDX1YGR193C PRO1P32264 428 aa4.36□□□□□ -1.71
PDX1YGR193C CDC11P32458 415 aa4.36□□□□□ -1.71
PDX1YGR193C SAP155P43612 1002 aa4.36□□□□□ -1.71
PDX1YGR193C YGR045CP53229 120 aa4.36□□□□□ -1.71
PDX1YGR193C ELA1P53861 379 aaPredicted RBP4.36□□□□□ -1.71
PDX1YGR193C TMA64Q04600 565 aaKnown RBP4.36□□□□□ -1.71
PDX1YGR193C KAR5Q04746 504 aa4.36□□□□□ -1.71
PDX1YGR193C MNL2Q12205 849 aa4.36□□□□□ -1.71
PDX1YGR193C YDL177CQ12257 170 aa4.36□□□□□ -1.71
PDX1YGR193C NFS1P25374 497 aa4.35□□□□□ -1.71
PDX1YGR193C HEM3P28789 327 aa4.35□□□□□ -1.71
PDX1YGR193C FLR1P38124 548 aa4.35□□□□□ -1.71
PDX1YGR193C ECM2P38241 364 aaKnown RBP4.35□□□□□ -1.71
PDX1YGR193C NOC2P39744 710 aaKnown RBP4.35□□□□□ -1.71
PDX1YGR193C VPS27P40343 622 aaKnown RBP4.35□□□□□ -1.71
PDX1YGR193C YGL081WP53156 320 aa4.35□□□□□ -1.71
PDX1YGR193C MEH1Q02205 184 aa4.35□□□□□ -1.71
PDX1YGR193C PRP6P19735 899 aaPredicted RBP4.34□□□□□ -1.71
PDX1YGR193C VMA4P22203 233 aaKnown RBP4.34□□□□□ -1.71
PDX1YGR193C SMY2P32909 740 aaKnown RBP4.34□□□□□ -1.71
PDX1YGR193C PTC7P38797 343 aa4.34□□□□□ -1.71
PDX1YGR193C PMC1P38929 1173 aaPredicted RBP4.34□□□□□ -1.71
PDX1YGR193C PSK2Q08217 1101 aa4.34□□□□□ -1.71
PDX1YGR193C FLP1P03870 423 aa4.33□□□□□ -1.72
PDX1YGR193C MPE1P35728 441 aaKnown RBP4.33□□□□□ -1.72
PDX1YGR193C AIM3P38266 947 aaKnown RBP4.33□□□□□ -1.72
PDX1YGR193C RIX1P38883 763 aaPredicted RBP4.33□□□□□ -1.72
PDX1YGR193C ERP2P39704 215 aa4.33□□□□□ -1.72
PDX1YGR193C TPM2P40414 161 aa4.33□□□□□ -1.72
PDX1YGR193C IES1P43579 692 aa4.33□□□□□ -1.72
PDX1YGR193C ATG1P53104 897 aa4.33□□□□□ -1.72
PDX1YGR193C ESF2P53743 316 aaKnown RBP4.33□□□□□ -1.72
PDX1YGR193C YDL121CQ07541 149 aa4.33□□□□□ -1.72
PDX1YGR193C SPT7P35177 1332 aa4.32□□□□□ -1.72
PDX1YGR193C BLI1P35727 113 aa4.32□□□□□ -1.72
PDX1YGR193C GTS1P40956 396 aa4.32□□□□□ -1.72
PDX1YGR193C NUT1P53114 1132 aa4.32□□□□□ -1.72
PDX1YGR193C YNL011CP53980 444 aa4.32□□□□□ -1.72
PDX1YGR193C PKH1Q03407 766 aa4.32□□□□□ -1.72
PDX1YGR193C TRS120Q04183 1289 aa4.32□□□□□ -1.72
PDX1YGR193C BSC2Q05611 235 aa4.32□□□□□ -1.72
PDX1YGR193C RPA135P22138 1203 aaKnown RBP4.31□□□□□ -1.72
PDX1YGR193C SEC27P41811 889 aaKnown RBP4.31□□□□□ -1.72
PDX1YGR193C NNF1P47149 201 aa4.31□□□□□ -1.72
PDX1YGR193C GRX3Q03835 250 aa4.31□□□□□ -1.72
PDX1YGR193C YSH1Q06224 779 aaPredicted RBP4.31□□□□□ -1.72
PDX1YGR193C PWP2P25635 923 aaKnown RBP4.3□□□□□ -1.72
PDX1YGR193C RRP14P36080 434 aaKnown RBP4.3□□□□□ -1.72
PDX1YGR193C PEA2P40091 420 aa4.3□□□□□ -1.72
PDX1YGR193C SLS1P42900 643 aa4.3□□□□□ -1.72
PDX1YGR193C MON1P53129 644 aa4.3□□□□□ -1.72
PDX1YGR193C PIL1P53252 339 aaKnown RBP4.3□□□□□ -1.72
PDX1YGR193C MRPL22P53881 309 aa4.3□□□□□ -1.72
PDX1YGR193C CDC55Q00362 526 aa4.3□□□□□ -1.72
PDX1YGR193C RCF1Q03713 159 aa4.3□□□□□ -1.72
PDX1YGR193C YDR341CQ05506 607 aaKnown RBP4.3□□□□□ -1.72
PDX1YGR193C HDA2Q06629 674 aa4.3□□□□□ -1.72
PDX1YGR193C PMT7Q06644 662 aa4.3□□□□□ -1.72
PDX1YGR193C IMH1Q06704 911 aaKnown RBP4.3□□□□□ -1.72
PDX1YGR193C AVO1Q08236 1176 aa4.3□□□□□ -1.72
PDX1YGR193C PUS7Q08647 676 aaKnown RBP4.3□□□□□ -1.72
PDX1YGR193C MCM5P29496 775 aaKnown RBP4.29□□□□□ -1.72
PDX1YGR193C NNK1P36003 928 aa4.29□□□□□ -1.72
PDX1YGR193C ARL1P38116 183 aaKnown RBP4.29□□□□□ -1.72
PDX1YGR193C ETP1P38748 585 aaKnown RBP4.29□□□□□ -1.72
PDX1YGR193C NEM1P38757 446 aa4.29□□□□□ -1.72
PDX1YGR193C NMD3P38861 518 aaKnown RBP4.29□□□□□ -1.72
PDX1YGR193C DJP1P40564 432 aa4.29□□□□□ -1.72
PDX1YGR193C TCB2P48231 1178 aa4.29□□□□□ -1.72
PDX1YGR193C YLR257WQ06146 321 aaKnown RBP4.29□□□□□ -1.72
PDX1YGR193C INP54Q08227 384 aaKnown RBP4.29□□□□□ -1.72
PDX1YGR193C APL5Q08951 932 aaKnown RBP4.29□□□□□ -1.72
PDX1YGR193C ERP4Q12450 207 aa4.29□□□□□ -1.72
PDX1YGR193C OPI1P21957 404 aa4.28□□□□□ -1.72
PDX1YGR193C EXO5P38289 585 aa4.28□□□□□ -1.72
PDX1YGR193C FAF1P40546 346 aaPredicted RBP4.28□□□□□ -1.72
PDX1YGR193C ACF4P47129 309 aa4.28□□□□□ -1.72
PDX1YGR193C HOS2P53096 452 aaPredicted RBP4.28□□□□□ -1.72
PDX1YGR193C GDE1Q02979 1223 aa4.28□□□□□ -1.72
PDX1YGR193C CEF1Q03654 590 aaPredicted RBP4.28□□□□□ -1.72
PDX1YGR193C TPP1Q03796 238 aa4.28□□□□□ -1.72
PDX1YGR193C CFT2Q12102 859 aaPredicted RBP4.28□□□□□ -1.72
PDX1YGR193C NOP58Q12499 511 aaKnown RBP4.28□□□□□ -1.72
PDX1YGR193C MUM2P38236 366 aa4.27□□□□□ -1.73
PDX1YGR193C RIM8P53179 542 aa4.27□□□□□ -1.73
PDX1YGR193C GIS1Q03833 894 aa4.27□□□□□ -1.73
PDX1YGR193C COG4Q06096 861 aa4.27□□□□□ -1.73
PDX1YGR193C NKP1Q12493 238 aa4.27□□□□□ -1.73
PDX1YGR193C SSB1P11484 613 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms