RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHX1	YDR456W	CCT5	P40413	562 aa	Known RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	APL6	P46682	809 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	GYP7	P48365	746 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	ENV11	P53246	860 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	COG4	Q06096	861 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	PUN1	Q06991	263 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	PEX19	Q07418	342 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	NKP1	Q12493	238 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	LSO1	Q3E827	93 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	FUR4	P05316	633 aa	Known RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	BYE1	P36106	594 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	GRX7	P38068	203 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	YAP3	P38749	330 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	ECM1	P39715	212 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	RPS26A	P39938	119 aa	Known RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	RPS26B	P39939	119 aa	Known RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	NPA3	P47122	385 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	CWH41	P53008	833 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	RRP46	P53256	223 aa	Predicted RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	YNL050C	P53952	270 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	VPS30	Q02948	557 aa		4.64	□□□□□ -1.67
NHX1	YDR456W	UTP13	Q05946	817 aa	Known RBP	4.64	□□□□□ -1.67
NHX1	YDR456W	RPO41	P13433	1351 aa	Known RBP	4.63	□□□□□ -1.67
NHX1	YDR456W	PIF1	P07271	859 aa		4.63	□□□□□ -1.67
NHX1	YDR456W	MED8	P38304	223 aa		4.63	□□□□□ -1.67
NHX1	YDR456W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
NHX1	YDR456W	NNF2	P53253	936 aa		4.63	□□□□□ -1.67
NHX1	YDR456W	RTT109	Q07794	436 aa		4.63	□□□□□ -1.67
NHX1	YDR456W	PUS1	Q12211	544 aa	Known RBP	4.63	□□□□□ -1.67
NHX1	YDR456W	SWI1	P09547	1314 aa		4.63	□□□□□ -1.67
NHX1	YDR456W	VAS1	P07806	1104 aa	Known RBP	4.62	□□□□□ -1.67
NHX1	YDR456W	MFT1	P33441	392 aa	Known RBP	4.62	□□□□□ -1.67
NHX1	YDR456W	KTR2	P33550	425 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	VPS41	P38959	992 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	IES5	P40060	125 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	YNR029C	P53729	429 aa	Known RBP	4.62	□□□□□ -1.67
NHX1	YDR456W	TIM50	Q02776	476 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	RMD1	Q03441	430 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	TRS120	Q04183	1289 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	RLP24	Q07915	199 aa	Known RBP	4.62	□□□□□ -1.67
NHX1	YDR456W	MDM38	Q08179	573 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	GYP1	Q08484	637 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	APC11	Q12157	165 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	HIF1	Q12373	385 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	SEC39	Q12745	709 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	SES1	P07284	462 aa	Known RBP	4.62	□□□□□ -1.67
NHX1	YDR456W	CDC16	P09798	840 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	RPL19A	P0CX82	189 aa	Known RBP	4.62	□□□□□ -1.67
NHX1	YDR456W	RPL19B	P0CX83	189 aa	Predicted RBP	4.62	□□□□□ -1.67
NHX1	YDR456W	YEL043W	P32618	956 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	SWH1	P35845	1188 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	RPT2	P40327	437 aa	Known RBP	4.62	□□□□□ -1.67
NHX1	YDR456W	GDE1	Q02979	1223 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	YCG1	Q06680	1035 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	YPR084W	Q06821	456 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	ENV9	Q08651	330 aa		4.62	□□□□□ -1.67
NHX1	YDR456W	PDC1	P06169	563 aa	Known RBP	4.61	□□□□□ -1.67
NHX1	YDR456W	CLN2	P20438	545 aa		4.61	□□□□□ -1.67
NHX1	YDR456W	CRP1	P38845	465 aa	Known RBP	4.61	□□□□□ -1.67
NHX1	YDR456W	YNL011C	P53980	444 aa		4.61	□□□□□ -1.67
NHX1	YDR456W	TBF1	Q02457	562 aa		4.61	□□□□□ -1.67
NHX1	YDR456W	SML1	Q04964	104 aa		4.61	□□□□□ -1.67
NHX1	YDR456W	OMS1	Q06668	471 aa		4.61	□□□□□ -1.67
NHX1	YDR456W	PSK2	Q08217	1101 aa		4.61	□□□□□ -1.67
NHX1	YDR456W	RPS19A	P07280	144 aa	Known RBP	4.6	□□□□□ -1.67
NHX1	YDR456W	RPS19B	P07281	144 aa	Predicted RBP	4.6	□□□□□ -1.67
NHX1	YDR456W	ERR1	P0CX10	437 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	ERR2	P0CX11	437 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	HAP4	P14064	554 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	YKL069W	P36088	180 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	DID4	P36108	232 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	SPO22	P40511	975 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	ARP5	P53946	755 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	RPN7	Q06103	429 aa	Known RBP	4.6	□□□□□ -1.67
NHX1	YDR456W	APC1	P53886	1748 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	PHO8	P11491	566 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	RAD4	P14736	754 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	SRM1	P21827	482 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	NPR3	P38742	1146 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	RRM3	P38766	723 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	HOS4	P40480	1083 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	MTR4	P47047	1073 aa	Known RBP	4.6	□□□□□ -1.67
NHX1	YDR456W	YJR120W	P47157	116 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	VPS4	P52917	437 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	YGL140C	P53120	1219 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	MAL13	P53338	473 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	TGL2	P54857	326 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	CEF1	Q03654	590 aa	Predicted RBP	4.6	□□□□□ -1.67
NHX1	YDR456W	UTP14	Q04500	899 aa	Known RBP	4.6	□□□□□ -1.67
NHX1	YDR456W	EIS1	Q05050	843 aa	Known RBP	4.6	□□□□□ -1.67
NHX1	YDR456W	YOR131C	Q12486	218 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	YRF1-1	P0CX20	1796 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	YRF1-5	P0CX21	1796 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	YRF1-8	P0CX22	1796 aa		4.6	□□□□□ -1.67
NHX1	YDR456W	LEU2	P04173	364 aa	Predicted RBP	4.59	□□□□□ -1.67
NHX1	YDR456W	RAD3	P06839	778 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	MOD5	P07884	428 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	STE11	P23561	717 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	MSH1	P25846	959 aa		4.59	□□□□□ -1.67
NHX1	YDR456W	SPT16	P32558	1035 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms