RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W CTR9P89105 1077 aa2.86□□□□□ -1.95
SWR1YDR334W NOC3Q07896 663 aaPredicted RBP2.86□□□□□ -1.95
SWR1YDR334W TMA46Q12000 345 aaKnown RBP2.86□□□□□ -1.95
SWR1YDR334W CLB1P24868 471 aa2.86□□□□□ -1.95
SWR1YDR334W SMC2P38989 1170 aaKnown RBP2.86□□□□□ -1.95
SWR1YDR334W YJR098CP47139 656 aa2.86□□□□□ -1.95
SWR1YDR334W HST3P53687 447 aa2.86□□□□□ -1.95
SWR1YDR334W YMR074CQ04773 145 aa2.86□□□□□ -1.95
SWR1YDR334W YLR281CQ05863 155 aa2.86□□□□□ -1.95
SWR1YDR334W PUS5Q06244 254 aa2.86□□□□□ -1.95
SWR1YDR334W RAD2P07276 1031 aa2.86□□□□□ -1.95
SWR1YDR334W PDC6P26263 563 aaKnown RBP2.86□□□□□ -1.95
SWR1YDR334W PTK2P47116 818 aaKnown RBP2.86□□□□□ -1.95
SWR1YDR334W VPS9P54787 451 aa2.86□□□□□ -1.95
SWR1YDR334W ADI1Q03677 179 aa2.86□□□□□ -1.95
SWR1YDR334W ECM16Q04217 1267 aaKnown RBP2.86□□□□□ -1.95
SWR1YDR334W TIF6Q12522 245 aaKnown RBP2.86□□□□□ -1.95
SWR1YDR334W RSF2P46974 1380 aa2.86□□□□□ -1.95
SWR1YDR334W SSE1P32589 693 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W AHP1P38013 176 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W PET100P38958 111 aa2.85□□□□□ -1.95
SWR1YDR334W GNP1P48813 663 aa2.85□□□□□ -1.95
SWR1YDR334W GUP1P53154 560 aa2.85□□□□□ -1.95
SWR1YDR334W YML108WQ03759 105 aa2.85□□□□□ -1.95
SWR1YDR334W ROM2P51862 1356 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W SHU2P38957 223 aa2.85□□□□□ -1.95
SWR1YDR334W MAM1P40065 302 aa2.85□□□□□ -1.95
SWR1YDR334W QDR2P40474 542 aa2.85□□□□□ -1.95
SWR1YDR334W NUT1P53114 1132 aa2.85□□□□□ -1.95
SWR1YDR334W TY1A-DR3Q12441 440 aa2.85□□□□□ -1.95
SWR1YDR334W CDC19P00549 500 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W PRE9P23638 258 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W UGA3P26370 528 aa2.85□□□□□ -1.95
SWR1YDR334W RPC82P32349 654 aa2.85□□□□□ -1.95
SWR1YDR334W TAT2P38967 592 aa2.85□□□□□ -1.95
SWR1YDR334W SFB2P53953 876 aa2.85□□□□□ -1.95
SWR1YDR334W RPN4Q03465 531 aa2.85□□□□□ -1.95
SWR1YDR334W MAG2Q06436 670 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W IMH1Q06704 911 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W CDC34P14682 295 aa2.85□□□□□ -1.95
SWR1YDR334W TPM1P17536 199 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W VMA4P22203 233 aaKnown RBP2.85□□□□□ -1.95
SWR1YDR334W RDH54P38086 958 aa2.85□□□□□ -1.95
SWR1YDR334W ITC1P53125 1264 aa2.85□□□□□ -1.95
SWR1YDR334W YNL165WP53891 406 aa2.85□□□□□ -1.95
SWR1YDR334W YLR346CQ06139 101 aa2.85□□□□□ -1.95
SWR1YDR334W BDF2Q07442 638 aa2.85□□□□□ -1.95
SWR1YDR334W GSC2P40989 1895 aa2.84□□□□□ -1.95
SWR1YDR334W RPP0P05317 312 aaKnown RBP2.84□□□□□ -1.95
SWR1YDR334W HSP104P31539 908 aaKnown RBP2.84□□□□□ -1.95
SWR1YDR334W LSP1Q12230 341 aaKnown RBP2.84□□□□□ -1.95
SWR1YDR334W LYS5P50113 272 aa2.84□□□□□ -1.95
SWR1YDR334W SHE9Q04172 456 aa2.84□□□□□ -1.95
SWR1YDR334W SOG2Q08817 791 aa2.84□□□□□ -1.95
SWR1YDR334W RPB10P22139 70 aa2.84□□□□□ -1.96
SWR1YDR334W PEA2P40091 420 aa2.84□□□□□ -1.96
SWR1YDR334W YFL066CP43538 392 aa2.84□□□□□ -1.96
SWR1YDR334W OSW7P43611 510 aa2.84□□□□□ -1.96
SWR1YDR334W BIO5P53744 561 aaKnown RBP2.84□□□□□ -1.96
SWR1YDR334W EMG1Q06287 252 aaKnown RBP2.84□□□□□ -1.96
SWR1YDR334W YIG1Q08956 461 aa2.84□□□□□ -1.96
SWR1YDR334W FUS1P11710 512 aa2.83□□□□□ -1.96
SWR1YDR334W CLC1P17891 233 aa2.83□□□□□ -1.96
SWR1YDR334W SEC14P24280 304 aaKnown RBP2.83□□□□□ -1.96
SWR1YDR334W ZIP1P31111 875 aa2.83□□□□□ -1.96
SWR1YDR334W ASH1P34233 588 aa2.83□□□□□ -1.96
SWR1YDR334W AIM46P38885 310 aa2.83□□□□□ -1.96
SWR1YDR334W SIW14P53965 281 aa2.83□□□□□ -1.96
SWR1YDR334W MED2Q12124 431 aa2.83□□□□□ -1.96
SWR1YDR334W Q0182Q9ZZW1 134 aa2.83□□□□□ -1.96
SWR1YDR334W MLP1Q02455 1875 aaKnown RBP2.83□□□□□ -1.96
SWR1YDR334W MRPS18P42847 217 aa2.83□□□□□ -1.96
SWR1YDR334W CUS1Q02554 436 aaPredicted RBP2.83□□□□□ -1.96
SWR1YDR334W PRP40P33203 583 aaKnown RBP2.83□□□□□ -1.96
SWR1YDR334W OSH7P38755 437 aa2.83□□□□□ -1.96
SWR1YDR334W ACO2P39533 789 aa2.83□□□□□ -1.96
SWR1YDR334W NNF2P53253 936 aa2.83□□□□□ -1.96
SWR1YDR334W YNL058CP53947 316 aa2.83□□□□□ -1.96
SWR1YDR334W NAN1Q02931 896 aaKnown RBP2.83□□□□□ -1.96
SWR1YDR334W MGR3Q04472 501 aa2.83□□□□□ -1.96
SWR1YDR334W ARD1P07347 238 aaPredicted RBP2.83□□□□□ -1.96
SWR1YDR334W DIT1P21623 536 aa2.83□□□□□ -1.96
SWR1YDR334W ILV6P25605 309 aaKnown RBP2.83□□□□□ -1.96
SWR1YDR334W RPT1P33299 467 aaKnown RBP2.83□□□□□ -1.96
SWR1YDR334W GCV1P48015 400 aa2.83□□□□□ -1.96
SWR1YDR334W GIR2Q03768 265 aaPredicted RBP2.83□□□□□ -1.96
SWR1YDR334W SPN1Q06505 410 aaPredicted RBP2.83□□□□□ -1.96
SWR1YDR334W TY1A-BLQ12266 440 aa2.83□□□□□ -1.96
SWR1YDR334W YOL098CQ12496 1037 aa2.83□□□□□ -1.96
SWR1YDR334W SRB4P32569 687 aa2.82□□□□□ -1.96
SWR1YDR334W RRP14P36080 434 aaKnown RBP2.82□□□□□ -1.96
SWR1YDR334W TRZ1P36159 838 aaPredicted RBP2.82□□□□□ -1.96
SWR1YDR334W NCL1P38205 684 aaKnown RBP2.82□□□□□ -1.96
SWR1YDR334W MSC7P38694 644 aa2.82□□□□□ -1.96
SWR1YDR334W SSF2Q12153 453 aaPredicted RBP2.82□□□□□ -1.96
SWR1YDR334W CLF1Q12309 687 aaPredicted RBP2.82□□□□□ -1.96
SWR1YDR334W GLE1Q12315 538 aa2.82□□□□□ -1.96
SWR1YDR334W COBP00163 385 aa2.82□□□□□ -1.96
SWR1YDR334W FUN30P31380 1131 aa2.82□□□□□ -1.96
SWR1YDR334W CBF5P33322 483 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms